Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006268 Camellia sinensis var. sinensis HOM05D003809 ORTHO05D003935 1.4e-150 536.2 264 100.0
Dinv28631 Davidia involucrata HOM05D003809 ORTHO05D003935 5.2e-44 182.2 211 43.6
Rhsim13G0070300 Rhododendron simsii HOM05D003809 ORTHO05D003935 1.5e-43 180.6 227 42.3
Aqoxy4G02610 Aquilegia oxysepala HOM05D003809 ORTHO05D003935 7.9e-32 141.7 244 36.1
TAR369G1072 Trochodendron aralioides HOM05D003809 ORTHO05D003935 2.3e-31 140.2 209 37.8
TAR369G0780 Trochodendron aralioides HOM05D003809 ORTHO05D003935 8.7e-31 138.3 250 34.8
Cpa.g.sc112.34 Carica papaya HOM05D003809 ORTHO05D003935 1.1e-30 137.9 212 37.3
Prupe.6G058700 Prunus persica HOM05D003809 ORTHO05D003935 9.6e-30 134.8 221 35.7
Atru.chr8.2220 Acer truncatum HOM05D003809 ORTHO05D003935 1.3e-29 134.4 277 34.3
CANSAT35G1529 Cannabis sativa HOM05D003809 ORTHO05D003935 1.6e-29 134.0 222 34.7
Cfa017221 Carpinus fangiana HOM05D003809 ORTHO05D003935 6.2e-29 132.1 255 33.7
Cfa017222 Carpinus fangiana HOM05D003809 ORTHO05D003935 6.2e-29 132.1 255 33.7
Thecc.05G018100 Theobroma cacao HOM05D003809 ORTHO05D003935 6.2e-29 132.1 255 32.5
Oeu055170.1 Olea europaea HOM05D003809 ORTHO05D003935 8.1e-29 131.7 227 35.2
Hund04870 Selenicereus undatus HOM05D003809 ORTHO05D003935 1.1e-28 131.3 217 36.9
Manes.02G120500 Manihot esculenta HOM05D003809 ORTHO05D003935 1.8e-28 130.6 94 56.4
Nn2g11447 Nelumbo nucifera HOM05D003809 ORTHO05D003935 2.4e-28 130.2 130 48.5
TPR.G13325 Trifolium pratense HOM05D003809 ORTHO05D003935 2.4e-28 130.2 253 33.2
Medtr4g015550 Medicago truncatula HOM05D003809 ORTHO05D003935 3.1e-28 129.8 267 34.5
COL.COLO4_19141 Corchorus olitorius HOM05D000001 ORTHO05D000003 4.0e-28 129.4 247 32.8
GSVIVG01033976001 Vitis vinifera HOM05D003809 ORTHO05D003935 4.0e-28 129.4 206 39.3
Potri.009G044800 Populus trichocarpa HOM05D003809 ORTHO05D003935 6.9e-28 128.6 216 35.2
TAR623G0913 Trochodendron aralioides HOM05D003809 ORTHO05D003935 9.0e-28 128.3 234 33.3
PSO339G2972 Papaver somniferum HOM05D003809 ORTHO05D003935 1.2e-27 127.9 257 32.3
Prupe.6G275300 Prunus persica HOM05D003809 ORTHO05D003935 1.5e-27 127.5 309 29.8
Ca_20297_v3 Cicer arietinum L. HOM05D003809 ORTHO05D003935 3.4e-27 126.3 251 32.7
FAN09G2283 Fragaria x ananassa HOM05D003809 ORTHO05D003935 7.6e-27 125.2 200 38.0
Glyma.01G115000 Glycine max HOM05D003809 ORTHO05D003935 7.6e-27 125.2 251 31.9
Glyma.03G063000 Glycine max HOM05D003809 ORTHO05D003935 7.6e-27 125.2 137 45.3
Aa31LG1G22880 Aethionema arabicum HOM05D003809 ORTHO05D003935 9.9e-27 124.8 143 44.1
FvH4_6g11650 Fragaria vesca HOM05D003809 ORTHO05D003935 9.9e-27 124.8 200 37.5
FAN14G4099 Fragaria x ananassa HOM05D003809 ORTHO05D003935 9.9e-27 124.8 200 37.5
Dinv14451 Davidia involucrata HOM05D003809 ORTHO05D003935 1.7e-26 124.0 134 44.8
Potri.016G114500 Populus trichocarpa HOM05D003809 ORTHO05D003935 1.7e-26 124.0 133 44.4
RcHm_v2.0_Chr3g0463311 Rosa chinensis HOM05D003809 ORTHO05D003935 1.7e-26 124.0 259 33.6
FAN14G0248 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.2e-26 123.6 200 37.5
Sabra09G0032300 Salix brachista HOM05D000001 ORTHO05D000003 2.2e-26 123.6 213 35.2
CiPaw.09G207900 Carya illinoinensis HOM05D003809 ORTHO05D003935 2.9e-26 123.2 126 46.0
Glyma.03G062500 Glycine max HOM05D003809 ORTHO05D003935 3.8e-26 122.9 136 44.9
Ciclev10011409m.g Citrus clementina HOM05D003809 ORTHO05D003935 4.9e-26 122.5 191 37.2
vmacro08854 Vaccinium macrocarpon HOM05D003809 ORTHO05D003935 4.9e-26 122.5 216 32.9
Glyma.03G061700 Glycine max HOM05D003809 ORTHO05D003935 6.4e-26 122.1 93 53.8
Manes.01G162300 Manihot esculenta HOM05D003809 ORTHO05D003935 6.4e-26 122.1 95 50.5
Cpa.g.sc163.14 Carica papaya HOM05D003809 ORTHO05D003935 8.4e-26 121.7 162 41.4
PGR004G1101 Punica granatum HOM05D003809 ORTHO05D003935 1.4e-25 120.9 107 49.5
Hma1.2p1_0362F.1_g136090 Hydrangea macrophylla HOM05D003809 ORTHO05D003935 1.9e-25 120.6 215 34.4
ClCG10G022040 Citrullus lanatus HOM05D003809 ORTHO05D003935 2.4e-25 120.2 122 42.6
MD04G1150500 Malus domestica HOM05D003809 ORTHO05D003935 2.4e-25 120.2 171 35.7
VMungo0331G1847 Vigna mungo HOM05D003809 ORTHO05D003935 2.4e-25 120.2 230 33.9
Glyma.03G062800 Glycine max HOM05D003809 ORTHO05D003935 4.2e-25 119.4 156 41.0
MD12G1164600 Malus domestica HOM05D003809 ORTHO05D003935 4.2e-25 119.4 171 36.3
Nn2g13682 Nelumbo nucifera HOM05D003809 ORTHO05D003935 4.2e-25 119.4 106 50.9
Potri.006G099200 Populus trichocarpa HOM05D003809 ORTHO05D003935 4.2e-25 119.4 235 33.6
Duzib128G0737 Durio zibethinus HOM05D003809 ORTHO05D003935 5.5e-25 119.0 257 33.1
FAN02G0645 Fragaria x ananassa HOM05D003809 ORTHO05D003935 5.5e-25 119.0 200 37.0
THA.LOC104816652 Tarenaya hassleriana HOM05D003809 ORTHO05D003935 5.5e-25 119.0 220 33.6
Eucgr.K02988 Eucalyptus grandis HOM05D003809 ORTHO05D003935 7.1e-25 118.6 89 56.2
Glyma.03G061852 Glycine max HOM05D003809 ORTHO05D003935 7.1e-25 118.6 119 47.1
Glyma.03G062300 Glycine max HOM05D003809 ORTHO05D003935 7.1e-25 118.6 119 47.1
Lalb_Chr01g0022961 Lupinus albus HOM05D003809 ORTHO05D003935 9.3e-25 118.2 118 43.2
TWI74G0880 Tripterygium wilfordii HOM05D003809 ORTHO05D003935 9.3e-25 118.2 240 33.3
AUR62001660 Chenopodium quinoa HOM05D000001 ORTHO05D000003 1.2e-24 117.9 108 50.0
Glyma.U024600 Glycine max HOM05D003809 ORTHO05D003935 2.1e-24 117.1 92 52.2
CsaV3_3G033890 Cucumis sativus L. HOM05D003809 ORTHO05D003935 3.5e-24 116.3 123 43.9
Sabra06G0076000 Salix brachista HOM05D003809 ORTHO05D003935 4.6e-24 115.9 137 39.4
FAN21G3156 Fragaria x ananassa HOM05D003809 ORTHO05D003935 6.0e-24 115.5 209 33.5
FAN25G1218 Fragaria x ananassa HOM05D000001 ORTHO05D000003 6.0e-24 115.5 210 34.3
Manes.09G104500 Manihot esculenta HOM05D003809 ORTHO05D003935 7.9e-24 115.2 173 38.2
Sc07g0006540 Simmondsia chinensis HOM05D003809 ORTHO05D003935 7.9e-24 115.2 122 44.3
COL.COLO4_14553 Corchorus olitorius HOM05D003809 ORTHO05D003935 1.0e-23 114.8 125 42.4
MELO3C009176.2 Cucumis melo HOM05D003809 ORTHO05D003935 1.3e-23 114.4 142 37.3
Duzib106G1511 Durio zibethinus HOM05D003809 ORTHO05D003935 1.8e-23 114.0 253 31.6
FvH4_3g38430 Fragaria vesca HOM05D003809 ORTHO05D003935 1.8e-23 114.0 209 33.0
FAN11G1208 Fragaria x ananassa HOM05D003809 ORTHO05D003935 1.8e-23 114.0 209 33.0
Glyma.03G061802 Glycine max HOM05D003809 ORTHO05D003935 3.0e-23 113.2 83 53.0
Glyma.03G062100 Glycine max HOM05D003809 ORTHO05D003935 3.0e-23 113.2 83 53.0
Actinidia20726 Actinidia chinensis HOM05D003809 ORTHO05D003935 6.7e-23 112.1 110 43.6
Lj1g0000205 Lotus japonicus HOM05D003809 ORTHO05D003935 6.7e-23 112.1 132 39.4
Nitab4.5_0008420g0020 Nicotiana tabacum HOM05D003809 ORTHO05D003935 6.7e-23 112.1 206 34.0
Lj3g0017704 Lotus japonicus HOM05D003809 ORTHO05D003935 8.7e-23 111.7 94 51.1
Psat7g246040 Pisum sativum HOM05D003809 ORTHO05D003935 8.7e-23 111.7 159 37.7
BraA03t09429Z Brassica rapa HOM05D003809 ORTHO05D003935 1.5e-22 110.9 212 34.0
FAN16G0765 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.5e-22 110.9 209 32.5
Lalb_Chr03g0043131 Lupinus albus HOM05D003809 ORTHO05D003935 1.5e-22 110.9 120 42.5
Nitab4.5_0000335g0110 Nicotiana tabacum HOM05D003809 ORTHO05D003935 1.5e-22 110.9 210 32.9
AT5G01260 Arabidopsis thaliana HOM05D003809 ORTHO05D003935 1.9e-22 110.5 203 32.0
FAN05G1413 Fragaria x ananassa HOM05D003809 ORTHO05D003935 1.9e-22 110.5 200 36.0
Peaxi162Scf00141g00342 Petunia axillaris HOM05D003809 ORTHO05D003935 1.9e-22 110.5 191 33.5
Sp6g40590 Schrenkiella parvula HOM05D003809 ORTHO05D003935 1.9e-22 110.5 197 33.0
BcaNung06532 Brassica carinata HOM05D003809 ORTHO05D003935 2.5e-22 110.2 198 35.4
DCAR_015432 Daucus carota HOM05D003809 ORTHO05D003935 3.3e-22 109.8 211 31.3
Sed0009856 Sechium edule HOM05D003809 ORTHO05D003935 3.3e-22 109.8 164 37.8
Sc06g0006210 Simmondsia chinensis HOM05D003809 ORTHO05D003935 4.3e-22 109.4 205 32.2
A03p00380 Brassica napus HOM05D003809 ORTHO05D003935 7.4e-22 108.6 210 33.8
DCAR_018710 Daucus carota HOM05D003809 ORTHO05D003935 7.4e-22 108.6 136 41.2
Sed0014073 Sechium edule HOM05D003809 ORTHO05D003935 7.4e-22 108.6 148 35.1
AL6G10910 Arabidopsis lyrata HOM05D003809 ORTHO05D003935 9.6e-22 108.2 94 47.9
Thhalv10013736m.g Eutrema salsugineum HOM05D003809 ORTHO05D003935 9.6e-22 108.2 203 32.0
MBI05_g34490_MAGBIO Magnolia biondii HOM05D003809 ORTHO05D003935 9.6e-22 108.2 81 55.6
Manes.08G091100 Manihot esculenta HOM05D003809 ORTHO05D003935 9.6e-22 108.2 268 29.9
Sopen09g007230 Solanum pennellii HOM05D003809 ORTHO05D003935 9.6e-22 108.2 202 34.7
Carub.0006s0062 Capsella rubella HOM05D003809 ORTHO05D003935 1.6e-21 107.5 204 32.4
Lj3A954G70 Lonicera japonica HOM05D003809 ORTHO05D003935 1.6e-21 107.5 120 40.8
MSTRG.10226 Avicennia marina HOM05D003809 ORTHO05D003935 2.1e-21 107.1 215 32.1
Lj2A76T85 Lonicera japonica HOM05D003809 ORTHO05D003935 2.1e-21 107.1 126 38.1
SalBow4G1747 Salvia bowleyana HOM05D003809 ORTHO05D003935 2.1e-21 107.1 195 32.8
Solyc09g014400.3 Solanum lycopersicum HOM05D003809 ORTHO05D003935 2.1e-21 107.1 246 32.1
Gohir.A09G164500 Gossypium hirsutum HOM05D003809 ORTHO05D003935 2.8e-21 106.7 122 44.3
CAN.G772.1 Capsicum annuum HOM05D003809 ORTHO05D003935 4.8e-21 105.9 210 34.3
CSS0024242 Camellia sinensis var. sinensis HOM05D003809 ORTHO05D003935 6.2e-21 105.5 167 33.5
C03p00540 Brassica napus HOM05D003809 ORTHO05D003935 8.1e-21 105.1 216 34.3
Gohir.D11G348800 Gossypium hirsutum HOM05D003809 ORTHO05D003935 1.1e-20 104.8 141 34.8
Gorai.006G181700 Gossypium raimondii HOM05D003809 ORTHO05D003935 1.1e-20 104.8 122 43.4
Gorai.007G379100 Gossypium raimondii HOM05D003809 ORTHO05D003935 1.1e-20 104.8 141 34.8
Lalb_Chr19g0124721 Lupinus albus HOM05D003809 ORTHO05D003935 1.4e-20 104.4 122 41.0
Nn2g11448 Nelumbo nucifera HOM05D003809 ORTHO05D003935 4.0e-20 102.8 75 57.3
BolC3t12620H Brassica oleracea HOM05D003809 ORTHO05D003935 6.9e-20 102.1 217 33.6
Phvul.010G002900 Phaseolus vulgaris HOM05D003809 ORTHO05D003935 6.9e-20 102.1 228 31.1
SGA_v2.0_scaffold240G44100 Striga asiatica HOM05D003809 ORTHO05D003935 9.0e-20 101.7 209 33.5
arahy.Tifrunner.gnm1.ann1.31N575 Arachis hypogaea HOM05D003809 ORTHO05D003935 1.2e-19 101.3 122 41.0
CDE03G0216 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 1.2e-19 101.3 135 36.3
Gohir.D09G160100 Gossypium hirsutum HOM05D003809 ORTHO05D003935 1.5e-19 100.9 122 41.8
Gohir.A11G329600 Gossypium hirsutum HOM05D003809 ORTHO05D003935 2.0e-19 100.5 141 34.0
Lalb_Chr07g0193501 Lupinus albus HOM05D003809 ORTHO05D003935 2.0e-19 100.5 183 30.6
arahy.Tifrunner.gnm1.ann1.3JQR8Y Arachis hypogaea HOM05D003809 ORTHO05D003935 2.6e-19 100.1 154 37.7
CDE04G0185 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 2.6e-19 100.1 137 37.2
Lsat_1_v5_gn_5_155280 Lactuca sativa HOM05D003809 ORTHO05D003935 4.5e-19 99.4 103 41.7
Cc01_g20760 Coffea canephora HOM05D003809 ORTHO05D003935 5.8e-19 99.0 106 42.5
Cc06_g01490 Coffea canephora HOM05D003809 ORTHO05D003935 5.8e-19 99.0 106 42.5
HanXRQChr01g0007011 Helianthus annuus HOM05D003809 ORTHO05D003935 5.8e-19 99.0 131 39.7
PGR004G0704 Punica granatum HOM05D003809 ORTHO05D003935 5.8e-19 99.0 92 47.8
Glyma.07G148000 Glycine max HOM05D003809 ORTHO05D003935 1.0e-18 98.2 118 42.4
SEGI_38034 Sequoiadendron giganteum HOM05D003809 ORTHO05D003935 1.0e-18 98.2 130 34.6
HPP92_019882 Vanilla planifolia HOM05D003809 ORTHO05D003935 1.0e-18 98.2 114 40.4
Phvul.008G105500 Phaseolus vulgaris HOM05D003809 ORTHO05D003935 2.2e-18 97.1 129 38.8
arahy.Tifrunner.gnm1.ann1.TSB66L Arachis hypogaea HOM05D003809 ORTHO05D003935 3.8e-18 96.3 172 34.9
PSO566G0296 Papaver somniferum HOM05D003809 ORTHO05D003935 3.8e-18 96.3 121 42.1
PSO566G0209 Papaver somniferum HOM05D003809 ORTHO05D003935 4.9e-18 95.9 121 41.3
CARHR211600 Cardamine hirsuta HOM05D003809 ORTHO05D003935 1.4e-17 94.4 201 29.9
Glyma.18G199300 Glycine max HOM05D003809 ORTHO05D003935 1.4e-17 94.4 123 38.2
Migut.L02004 Erythranthe guttata HOM05D003809 ORTHO05D003935 3.2e-17 93.2 110 39.1
ATR0618G237 Amborella trichopoda HOM05D003809 ORTHO05D003935 7.1e-17 92.0 85 43.5
ECA246G4062 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.7e-16 90.1 97 41.2
PSO566G0289 Papaver somniferum HOM05D003809 ORTHO05D003935 3.5e-16 89.7 92 44.6
VMungo1383G0216 Vigna mungo HOM05D003809 ORTHO05D003935 4.6e-16 89.4 115 37.4
ECA248G2658 Erigeron canadensis HOM05D003809 ORTHO05D003935 1.8e-15 87.4 220 29.1
Zm00001eb367050 Zea mays HOM05D003809 ORTHO05D003935 1.8e-15 87.4 96 40.6
Os05g0446900 Oryza sativa ssp. japonica HOM05D003809 ORTHO05D003935 3.0e-15 86.7 164 32.3
Zm00001eb289050 Zea mays HOM05D003809 ORTHO05D003935 3.0e-15 86.7 170 35.9
PSO566G0059 Papaver somniferum HOM05D003809 ORTHO05D003935 3.3e-14 83.2 114 40.4
Dinv03585 Davidia involucrata HOM05D003809 ORTHO05D003935 4.3e-14 82.8 123 39.0
Ah.08g221090 Amaranthus hybridus HOM05D003809 ORTHO05D003935 9.6e-14 81.6 181 33.7
AagrBONN_evm.TU.Sc2ySwM_344.3507 Anthoceros agrestis HOM05D003809 ORTHO05D003935 1.1e-12 78.2 109 32.1
Os01g0856900 Oryza sativa ssp. japonica HOM05D003809 ORTHO05D003935 2.4e-12 77.0 85 35.3
SEGI_39495 Sequoiadendron giganteum HOM05D003809 ORTHO05D003935 3.1e-12 76.6 100 34.0
unitig_37.g12663 Utricularia gibba HOM05D003809 ORTHO05D003935 3.1e-12 76.6 96 37.5
Pp3c6_22980 Physcomitrium patens HOM05D003809 ORTHO05D003935 4.1e-12 76.3 96 38.5
SMO142G0031 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 2.6e-11 73.6 91 37.4
SMO358G0668 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 2.6e-11 73.6 91 37.4
Pp3c16_3300 Physcomitrium patens HOM05D003809 ORTHO05D003935 4.5e-11 72.8 127 30.7
Glyma.03G061751 Glycine max HOM05D003809 ORTHO05D003935 7.6e-11 72.0 51 47.1
SMO118G0122 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 3.8e-10 69.7 123 28.5
Mapoly0033s0050 Marchantia polymorpha HOM05D003809 ORTHO05D003935 5.5e-09 65.9 124 30.6
Pp3c23_18810 Physcomitrium patens HOM05D028458 ORTHO05D003935 2.7e-08 63.5 134 32.1
HPP92_019874 Vanilla planifolia HOM05D058214 ORTHO05D003935 8.7e-07 58.5 86 34.9
Haze_20987 Corylus avellana HOM05D003809 ORTHO05D003935 2.5e-06 57.0 232 25.0


User provided reference genes

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