Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005467 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D110402 1.6e-46 189.1 96 100.0
CSS0000580 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 3.5e-14 81.6 73 67.1
Eucgr.D00651 Eucalyptus grandis HOM05D002794 ORTHO05D003763 5.1e-13 77.8 73 65.8
Ciclev10014734m.g Citrus clementina HOM05D002794 ORTHO05D003763 6.6e-13 77.4 72 66.7
TAR624G1447 Trochodendron aralioides HOM05D002794 ORTHO05D003763 1.1e-12 76.6 73 64.4
TAR626G0204 Trochodendron aralioides HOM05D002794 ORTHO05D003763 1.1e-12 76.6 73 64.4
Hma1.2p1_1719F.1_g299220 Hydrangea macrophylla HOM05D002794 ORTHO05D003763 1.5e-12 76.3 72 65.3
Lj6g0005762 Lotus japonicus HOM05D002794 ORTHO05D003763 1.9e-12 75.9 73 64.4
CSS0002732 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 2.5e-12 75.5 72 63.9
CSS0042545 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 2.5e-12 75.5 72 63.9
EL10Ac8g20333 Beta vulgaris HOM05D002794 ORTHO05D003763 3.3e-12 75.1 75 62.7
CSS0005149 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 5.6e-12 74.3 73 63.0
Haze_06521 Corylus avellana HOM05D002794 ORTHO05D003763 5.6e-12 74.3 73 63.0
CAN.G1627.21 Capsicum annuum HOM05D002794 ORTHO05D003763 7.3e-12 73.9 72 63.9
Peaxi162Scf01163g00119 Petunia axillaris HOM05D002794 ORTHO05D003763 7.3e-12 73.9 72 63.9
Solyc02g078610.4 Solanum lycopersicum HOM05D002794 ORTHO05D003763 7.3e-12 73.9 72 63.9
Sopen02g023470 Solanum pennellii HOM05D002794 ORTHO05D003763 7.3e-12 73.9 72 63.9
Potri.011G047600 Populus trichocarpa HOM05D002794 ORTHO05D003763 9.6e-12 73.6 72 63.9
Sabra11G0033000 Salix brachista HOM05D002794 ORTHO05D003763 9.6e-12 73.6 72 63.9
CiPaw.09G055200 Carya illinoinensis HOM05D002794 ORTHO05D003763 1.2e-11 73.2 101 50.5
Glyma.13G241800 Glycine max HOM05D002794 ORTHO05D003763 1.2e-11 73.2 73 61.6
Glyma.15G071600 Glycine max HOM05D002794 ORTHO05D003763 1.2e-11 73.2 73 61.6
Potri.004G039000 Populus trichocarpa HOM05D002794 ORTHO05D003763 2.1e-11 72.4 72 62.5
Sabra04G0023900 Salix brachista HOM05D002794 ORTHO05D003763 2.1e-11 72.4 72 62.5
Hund21250 Selenicereus undatus HOM05D002794 ORTHO05D003763 2.1e-11 72.4 75 60.0
Actinidia01901 Actinidia chinensis HOM05D002794 ORTHO05D003763 2.8e-11 72.0 85 57.6
CiPaw.10G045900 Carya illinoinensis HOM05D002794 ORTHO05D003763 2.8e-11 72.0 73 63.0
Psat6g214160 Pisum sativum HOM05D002794 ORTHO05D003763 2.8e-11 72.0 73 61.6
PGSC0003DMG400022432 Solanum tuberosum HOM05D002794 ORTHO05D003763 2.8e-11 72.0 72 62.5
TPR.G12067 Trifolium pratense HOM05D002794 ORTHO05D003763 2.8e-11 72.0 73 61.6
Peaxi162Scf01021g00126 Petunia axillaris HOM05D002794 ORTHO05D003763 3.6e-11 71.6 72 61.1
Sed0014333 Sechium edule HOM05D002794 ORTHO05D003763 4.7e-11 71.2 73 60.3
Atru.chr10.1951 Acer truncatum HOM05D002794 ORTHO05D003763 6.2e-11 70.9 72 62.5
AUR62014781 Chenopodium quinoa HOM05D002794 ORTHO05D003763 6.2e-11 70.9 75 58.7
AUR62016968 Chenopodium quinoa HOM05D002794 ORTHO05D003763 6.2e-11 70.9 75 58.7
Sed0016399 Sechium edule HOM05D002794 ORTHO05D003763 6.2e-11 70.9 73 60.3
Solyc03g006520.3 Solanum lycopersicum HOM05D002794 ORTHO05D003763 8.1e-11 70.5 72 59.7
Sopen03g002520 Solanum pennellii HOM05D002794 ORTHO05D003763 8.1e-11 70.5 72 59.7
PGSC0003DMG400026857 Solanum tuberosum HOM05D002794 ORTHO05D003763 8.1e-11 70.5 72 59.7
Gohir.D06G130400 Gossypium hirsutum HOM05D002794 ORTHO05D003763 1.1e-10 70.1 72 61.1
MBI18_g17022_MAGBIO Magnolia biondii HOM05D002794 ORTHO05D003763 1.1e-10 70.1 101 49.5
PGR042G0244 Punica granatum HOM05D002794 ORTHO05D003763 1.4e-10 69.7 75 60.0
Rhsim02G0123600 Rhododendron simsii HOM05D002794 ORTHO05D003763 2.4e-10 68.9 73 61.6
vmacro03843 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 3.1e-10 68.6 72 58.3
Nitab4.5_0001833g0140 Nicotiana tabacum HOM05D002794 ORTHO05D003763 8.9e-10 67.0 70 58.6
SGA_v2.0_scaffold22G09776 Striga asiatica HOM05D002794 ORTHO05D003763 1.2e-09 66.6 72 56.9
RcHm_v2.0_Chr5g0007761 Rosa chinensis HOM05D002794 ORTHO05D003763 2.0e-09 65.9 76 57.9
HPP92_014808 Vanilla planifolia HOM05D002794 ORTHO05D003763 2.0e-09 65.9 73 54.8
Aa31LG6G3640 Aethionema arabicum HOM05D002794 ORTHO05D003763 3.4e-09 65.1 72 59.7
Aqoxy3G03900 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 4.4e-09 64.7 76 56.6
Aqoxy5G00583 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 4.4e-09 64.7 76 56.6
Nn1g06626 Nelumbo nucifera HOM05D002794 ORTHO05D003763 4.4e-09 64.7 73 57.5
Peaxi162Scf00535g00054 Petunia axillaris HOM05D002794 ORTHO05D003763 5.8e-09 64.3 72 56.9
Peaxi162Scf00535g00058 Petunia axillaris HOM05D002794 ORTHO05D003763 5.8e-09 64.3 72 56.9
Peaxi162Scf22083g00001 Petunia axillaris HOM05D002794 ORTHO05D003763 5.8e-09 64.3 72 56.9
THA.LOC104812959 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 7.6e-09 63.9 75 57.3
Aa31LG9G9480 Aethionema arabicum HOM05D002794 ORTHO05D003763 9.9e-09 63.5 72 58.3
Nn1g04005 Nelumbo nucifera HOM05D002794 ORTHO05D003763 9.9e-09 63.5 73 56.2
PSO541G2705 Papaver somniferum HOM05D002794 ORTHO05D003763 9.9e-09 63.5 98 49.0
THA.LOC104812811 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 1.3e-08 63.2 75 56.0
Migut.H01505 Erythranthe guttata HOM05D002794 ORTHO05D003763 1.7e-08 62.8 75 52.0
Ciclev10006607m.g Citrus clementina HOM05D002794 ORTHO05D003763 2.2e-08 62.4 93 48.4
Os02g0827300 Oryza sativa ssp. japonica HOM05D002794 ORTHO05D003763 2.9e-08 62.0 73 56.2
Prupe.4G042600 Prunus persica HOM05D002794 ORTHO05D003763 2.9e-08 62.0 75 54.7
RhsimUnG0043800 Rhododendron simsii HOM05D002794 ORTHO05D003763 2.9e-08 62.0 72 52.8
PSO675G3577 Papaver somniferum HOM05D002794 ORTHO05D003763 3.8e-08 61.6 105 45.7
TPR.G29054 Trifolium pratense HOM05D002794 ORTHO05D003763 3.8e-08 61.6 71 59.2
Aqoxy7G01746 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 4.9e-08 61.2 76 55.3
DCAR_004112 Daucus carota HOM05D002794 ORTHO05D003763 6.4e-08 60.8 72 55.6
Ca_00324_v3 Cicer arietinum L. HOM05D002794 ORTHO05D003763 8.4e-08 60.5 75 54.7
vmacro15890 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 8.4e-08 60.5 72 55.6
VMungo0540G1808 Vigna mungo HOM05D002794 ORTHO05D003763 8.4e-08 60.5 73 54.8
Phvul.006G188200 Phaseolus vulgaris HOM05D002794 ORTHO05D003763 1.1e-07 60.1 73 54.8
Glyma.13G182600 Glycine max HOM05D002794 ORTHO05D003763 1.4e-07 59.7 74 52.7
Atru.chr4.2241 Acer truncatum HOM05D002794 ORTHO05D003763 2.4e-07 58.9 74 52.7
CANSAT35G1204 Cannabis sativa HOM05D002794 ORTHO05D003763 2.4e-07 58.9 73 53.4
QL05p039258 Quercus lobata HOM05D002794 ORTHO05D003763 2.4e-07 58.9 72 54.2
ClCG11G010460 Citrullus lanatus HOM05D002794 ORTHO05D003763 3.2e-07 58.5 73 53.4
MELO3C008690.2 Cucumis melo HOM05D002794 ORTHO05D003763 3.2e-07 58.5 73 53.4
CsaV3_2G009900 Cucumis sativus L. HOM05D002794 ORTHO05D003763 3.2e-07 58.5 73 53.4
RcHm_v2.0_Chr2g0163041 Rosa chinensis HOM05D002794 ORTHO05D003763 3.2e-07 58.5 79 48.1
GSVIVG01002655001 Vitis vinifera HOM05D002794 ORTHO05D003763 3.2e-07 58.5 73 53.4
Medtr2g013350 Medicago truncatula HOM05D002794 ORTHO05D003763 4.2e-07 58.2 72 52.8
Manes.16G024600 Manihot esculenta HOM05D002794 ORTHO05D003763 5.4e-07 57.8 72 52.8
Manes.17G042900 Manihot esculenta HOM05D002794 ORTHO05D003763 5.4e-07 57.8 72 52.8
Hund23693 Selenicereus undatus HOM05D002794 ORTHO05D003763 5.4e-07 57.8 75 52.0
Duzib235G0583 Durio zibethinus HOM05D002794 ORTHO05D003763 7.1e-07 57.4 72 54.2
Gohir.A06G125702 Gossypium hirsutum HOM05D002794 ORTHO05D003763 7.1e-07 57.4 72 54.2
Medtr4g089085 Medicago truncatula HOM05D002794 ORTHO05D003763 9.3e-07 57.0 72 54.2
Nitab4.5_0003063g0060 Nicotiana tabacum HOM05D002794 ORTHO05D003763 9.3e-07 57.0 72 54.2
Nitab4.5_0003668g0030 Nicotiana tabacum HOM05D002794 ORTHO05D003763 9.3e-07 57.0 72 54.2
Oeu050833.1 Olea europaea HOM05D002794 ORTHO05D003763 1.2e-06 56.6 72 50.0
Pp3c17_13490 Physcomitrium patens HOM05D002794 ORTHO05D003763 1.2e-06 56.6 75 53.3
TWI38G2081 Tripterygium wilfordii HOM05D002794 ORTHO05D003763 1.2e-06 56.6 72 54.2
MD05G1318200 Malus domestica HOM05D002794 ORTHO05D003763 1.6e-06 56.2 75 50.7
Psat1g205880 Pisum sativum HOM05D002794 ORTHO05D003763 1.6e-06 56.2 73 53.4
Thecc.06G191900 Theobroma cacao HOM05D002794 ORTHO05D003763 1.6e-06 56.2 72 52.8
Duzib160G0262 Durio zibethinus HOM05D002794 ORTHO05D003763 2.1e-06 55.8 72 52.8
Oeu016115.2 Olea europaea HOM05D002794 ORTHO05D003763 2.1e-06 55.8 72 52.8
Duzib192G0647 Durio zibethinus HOM05D002794 ORTHO05D003763 2.7e-06 55.5 72 52.8
Pp3c14_10510 Physcomitrium patens HOM05D002794 ORTHO05D003763 2.7e-06 55.5 75 53.3
ECA248G2629 Erigeron canadensis HOM05D002794 ORTHO05D003763 6.0e-06 54.3 74 51.4


User provided reference genes

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