Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005128 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 9.4e-59 229.9 113 100.0
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 8.8e-49 196.8 101 97.0
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 3.3e-48 194.9 101 96.0
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 4.8e-47 191.0 101 93.1
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 2.4e-46 188.7 100 92.0
CSS0028723 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D006943 5.3e-46 187.6 101 92.1
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 6.5e-44 180.6 101 84.2
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 8.5e-44 180.3 102 91.2
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 1.9e-43 179.1 101 89.1
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 1.9e-43 179.1 102 89.2
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 9.4e-43 176.8 101 85.1
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 9.4e-43 176.8 101 85.1
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 9.4e-43 176.8 101 86.1
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 1.2e-42 176.4 102 82.4
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 1.2e-42 176.4 102 82.4
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 1.6e-42 176.0 101 84.2
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 2.7e-42 175.3 100 85.0
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 3.6e-42 174.9 101 84.2
PGSC0003DMG402018643 Solanum tuberosum HOM05D001734 ORTHO05D006943 3.6e-42 174.9 100 85.0
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 4.7e-42 174.5 101 86.1
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 6.1e-42 174.1 100 82.0
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 3.0e-41 171.8 101 83.2
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 4.0e-41 171.4 101 82.2
COL.COLO4_18014 Corchorus olitorius HOM05D001734 ORTHO05D006943 8.8e-41 170.2 99 82.8
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 8.8e-41 170.2 99 81.8
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 1.2e-40 169.9 101 82.2
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 1.5e-40 169.5 100 81.0
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 9.8e-40 166.8 100 80.0
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 9.8e-40 166.8 105 77.1
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 1.7e-39 166.0 101 82.2
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 4.8e-39 164.5 105 76.2
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 8.3e-39 163.7 101 80.2
Cpa.g.sc20.125 Carica papaya HOM05D001734 ORTHO05D006943 1.8e-38 162.5 104 76.9
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 1.2e-37 159.8 102 78.4
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 1.2e-37 159.8 102 78.4
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 1.2e-37 159.8 105 76.2
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 2.7e-37 158.7 101 78.2
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 3.5e-37 158.3 101 75.2
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 3.5e-37 158.3 101 79.2
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 7.7e-37 157.1 102 77.5
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 1.3e-36 156.4 100 77.0
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 1.7e-36 156.0 102 75.5
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 1.7e-36 156.0 110 70.0
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 1.7e-36 156.0 101 75.2
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 2.2e-36 155.6 102 75.5
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 2.9e-36 155.2 103 73.8
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 3.8e-36 154.8 101 72.3
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 3.8e-36 154.8 101 71.3
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 6.5e-36 154.1 101 77.2
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 6.5e-36 154.1 106 74.5
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 8.5e-36 153.7 101 73.3
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 1.5e-35 152.9 102 76.5
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 1.5e-35 152.9 104 72.1
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 1.9e-35 152.5 100 76.0
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 1.9e-35 152.5 103 74.8
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 2.5e-35 152.1 104 73.1
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 7.2e-35 150.6 111 67.6
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 9.5e-35 150.2 101 72.3
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 9.5e-35 150.2 101 72.3
Phvul.007G016800 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 9.5e-35 150.2 105 71.4
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 1.2e-34 149.8 101 76.2
MD10G1129800 Malus domestica HOM05D001734 ORTHO05D006943 1.6e-34 149.4 101 76.2
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.1e-34 149.1 101 71.3
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 2.8e-34 148.7 102 74.5
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 3.6e-34 148.3 97 76.3
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 4.7e-34 147.9 97 75.3
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.0e-33 146.7 101 71.3
PSO421G0641 Papaver somniferum HOM05D001734 ORTHO05D006943 2.3e-33 145.6 107 69.2
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 3.0e-33 145.2 104 70.2
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 8.8e-33 143.7 102 68.6
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 2.0e-32 142.5 106 67.0
TPR.G2477 Trifolium pratense HOM05D001734 ORTHO05D006943 2.6e-32 142.1 103 67.0
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 4.4e-32 141.4 101 69.3
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 3.7e-31 138.3 103 68.0
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 8.3e-31 137.1 105 63.8
CSS0006982 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D000417 1.1e-30 136.7 101 73.3
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 2.7e-29 132.1 103 65.0
AL7G48800 Arabidopsis lyrata HOM05D007723 ORTHO05D010327 2.3e-28 129.0 105 64.8
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 2.3e-28 129.0 103 61.2
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 2.9e-28 128.6 100 67.0
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 2.9e-28 128.6 100 67.0
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 3.8e-28 128.3 100 67.0
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 1.1e-27 126.7 104 63.5
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 1.1e-27 126.7 100 66.0
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 3.3e-27 125.2 104 61.5
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 2.1e-26 122.5 111 57.7
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 3.6e-26 121.7 104 63.5
Lj1g0005537 Lotus japonicus HOM05D001873 ORTHO05D001976 6.1e-26 120.9 102 65.7
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 1.8e-25 119.4 103 60.2
ATR0661G239 Amborella trichopoda HOM05D001734 ORTHO05D006943 3.4e-24 115.2 103 54.4
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 7.5e-24 114.0 110 54.5
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 4.9e-23 111.3 100 54.0
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 4.6e-21 104.8 84 66.7
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 1.5e-19 99.8 99 52.5
SEGI_26648 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 6.2e-18 94.4 106 47.2
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 8.0e-18 94.0 55 74.5
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis HOM05D001734 ORTHO05D006943 6.8e-17 90.9 100 45.0
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 6.8e-17 90.9 103 46.6
Aa31LG7G15750 Aethionema arabicum HOM05D001734 ORTHO05D006943 1.5e-16 89.7 107 45.8
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 1.7e-15 86.3 105 48.6
DCAR_022420 Daucus carota HOM05D001734 ORTHO05D006943 1.6e-13 79.7 56 75.0


User provided reference genes

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