Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004413 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 2.7e-61 238.4 116 100.0
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 2.7e-45 185.3 92 94.6
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 2.3e-44 182.2 92 90.2
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 5.1e-44 181.0 92 90.2
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 4.8e-42 174.5 92 87.0
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 4.8e-42 174.5 106 81.1
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 4.8e-42 174.5 92 87.0
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.1e-41 173.3 91 89.0
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.1e-41 173.3 91 89.0
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 1.1e-41 173.3 92 85.9
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 85.9
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 85.9
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 85.9
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 85.9
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 85.9
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 1.4e-41 172.9 92 87.0
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 1.8e-41 172.6 92 87.0
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 2.4e-41 172.2 92 87.0
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 3.1e-41 171.8 91 87.9
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 4.1e-41 171.4 92 87.0
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 4.1e-41 171.4 92 85.9
Solyc11g008050.1 Solanum lycopersicum HOM05D006212 ORTHO05D008245 5.3e-41 171.0 91 87.9
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 6.9e-41 170.6 92 83.7
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 6.9e-41 170.6 92 83.7
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 9.1e-41 170.2 106 74.5
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 9.1e-41 170.2 92 82.6
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.2e-40 169.9 92 84.8
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 1.2e-40 169.9 92 87.0
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 1.2e-40 169.9 92 87.0
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 1.5e-40 169.5 92 84.8
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 1.5e-40 169.5 92 85.9
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 1.5e-40 169.5 122 70.5
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 2.0e-40 169.1 92 85.9
SGA_v2.0_scaffold13G06519 Striga asiatica HOM05D006212 ORTHO05D008245 2.0e-40 169.1 92 83.7
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 4.5e-40 167.9 91 86.8
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 4.5e-40 167.9 92 84.8
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 4.5e-40 167.9 92 83.7
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 5.9e-40 167.5 84 90.5
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 5.9e-40 167.5 92 83.7
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 5.9e-40 167.5 92 84.8
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 7.7e-40 167.2 92 84.8
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 1.0e-39 166.8 92 83.7
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 1.3e-39 166.4 92 82.6
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 1.3e-39 166.4 92 82.6
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 1.7e-39 166.0 92 84.8
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 1.7e-39 166.0 92 83.7
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 2.2e-39 165.6 92 85.9
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 2.2e-39 165.6 92 83.7
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 2.9e-39 165.2 92 85.9
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 2.9e-39 165.2 92 83.7
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 2.9e-39 165.2 92 82.6
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 2.9e-39 165.2 92 81.5
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 2.9e-39 165.2 92 83.7
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 3.8e-39 164.9 92 81.5
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 3.8e-39 164.9 92 84.8
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 5.0e-39 164.5 92 82.6
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 5.0e-39 164.5 92 83.7
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 6.5e-39 164.1 92 82.6
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 6.5e-39 164.1 92 83.7
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 6.5e-39 164.1 92 80.4
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 8.5e-39 163.7 92 84.8
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 1.1e-38 163.3 92 82.6
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 1.1e-38 163.3 92 82.6
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 1.1e-38 163.3 92 80.4
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 1.1e-38 163.3 91 85.7
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 1.1e-38 163.3 92 83.7
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 1.4e-38 162.9 92 82.6
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 1.4e-38 162.9 92 81.5
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 1.4e-38 162.9 92 80.4
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 1.9e-38 162.5 92 81.5
Manes.10G051700 Manihot esculenta HOM05D006212 ORTHO05D008245 2.5e-38 162.2 92 81.5
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 4.2e-38 161.4 92 81.5
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 4.2e-38 161.4 92 81.5
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 5.5e-38 161.0 92 80.4
Lj2C23T6 Lonicera japonica HOM05D006212 ORTHO05D008245 7.2e-38 160.6 95 81.1
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 7.2e-38 160.6 92 80.4
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 9.4e-38 160.2 92 82.6
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 2.1e-37 159.1 109 71.6
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 1.0e-36 156.8 102 74.5
Psat6g175360 Pisum sativum HOM05D006212 ORTHO05D008245 3.9e-36 154.8 92 78.3
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 5.1e-36 154.5 102 73.5
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 8.8e-36 153.7 92 76.1
Os04g0164900 Oryza sativa ssp. japonica HOM05D006212 ORTHO05D008245 1.1e-35 153.3 92 73.9
AagrBONN_evm.TU.Sc2ySwM_368.1756 Anthoceros agrestis HOM05D006212 ORTHO05D008245 1.5e-35 152.9 92 76.1
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 2.0e-35 152.5 92 79.3
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 5.7e-35 151.0 92 78.3
Peaxi162Scf00982g00216 Petunia axillaris HOM05D006212 ORTHO05D008245 1.3e-34 149.8 112 70.5
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 2.2e-34 149.1 111 67.6
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 2.2e-34 149.1 102 69.6
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 6.3e-34 147.5 102 65.7
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 1.2e-32 143.3 85 80.0
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 1.5e-32 142.9 92 68.5
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 6.5e-31 137.5 93 72.0
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 2.3e-28 129.0 90 62.2
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 1.7e-26 122.9 85 72.9
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 3.7e-26 121.7 91 62.6
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 4.1e-17 91.7 92 53.3
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 3.5e-16 88.6 64 65.6
Lsat_1_v5_gn_5_31800 Lactuca sativa HOM05D006212 ORTHO05D008245 1.8e-12 76.3 81 53.1
Ciclev10031035m.g Citrus clementina HOM05D006212 ORTHO05D008245 5.4e-09 64.7 41 70.7


User provided reference genes

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