Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 3.2e-187 658.3 338 100.0
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 8.0e-130 467.6 350 71.7
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 2.2e-127 459.5 324 75.3
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 1.2e-125 453.8 332 72.6
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 2.1e-122 443.0 354 65.5
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 5.2e-121 438.3 353 67.4
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 1.3e-119 433.7 355 67.6
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 1.7e-119 433.3 352 67.0
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 1.8e-118 429.9 340 66.2
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 9.2e-118 427.6 363 64.7
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.2e-117 427.2 369 64.0
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 2.7e-117 426.0 352 66.5
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 4.6e-117 425.2 351 67.5
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 5.9e-117 424.9 352 65.3
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 5.0e-116 421.8 352 63.6
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 3.3e-115 419.1 311 70.7
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 4.3e-115 418.7 351 67.0
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 1.2e-114 417.2 351 65.8
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.6e-114 416.8 347 64.3
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 3.6e-114 415.6 330 65.2
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 8.0e-114 414.5 347 63.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 3.4e-112 409.1 345 65.5
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 7.5e-112 407.9 346 63.3
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 7.5e-112 407.9 348 63.8
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 6.4e-111 404.8 347 62.5
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 8.3e-111 404.4 345 63.5
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 8.3e-111 404.4 351 62.4
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.1e-110 402.1 352 61.9
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 9.2e-110 401.0 359 60.7
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 2.7e-109 399.4 359 61.8
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 7.8e-109 397.9 350 62.3
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 7.8e-109 397.9 348 62.1
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 5.6e-107 391.7 341 63.6
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 7.3e-107 391.3 355 61.4
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 7.3e-107 391.3 349 60.5
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 1.2e-106 390.6 351 62.4
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.6e-106 389.0 345 63.2
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 1.1e-105 387.5 347 62.0
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.8e-105 386.7 356 61.2
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 4.0e-105 385.6 355 59.4
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 4.0e-105 385.6 350 62.3
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.0e-104 383.3 340 62.4
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 5.8e-104 381.7 350 60.6
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 2.2e-103 379.8 337 59.3
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 1.9e-102 376.7 348 58.9
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 7.1e-102 374.8 345 62.3
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 2.1e-101 373.2 343 60.3
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 2.7e-101 372.9 343 58.6
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 3.5e-101 372.5 351 60.1
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 4.6e-101 372.1 307 63.2
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 7.8e-101 371.3 345 58.6
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 1.0e-100 370.9 355 58.6
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 1.3e-100 370.5 343 59.5
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.7e-100 370.2 349 57.9
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 3.0e-100 369.4 346 59.8
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.9e-100 369.0 349 57.6
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 5.1e-100 368.6 341 60.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 6.6e-100 368.2 347 59.1
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 8.6e-100 367.9 349 57.3
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 3.3e-99 365.9 349 58.7
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.3e-99 365.9 348 57.2
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.2e-98 364.0 346 58.1
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 1.6e-98 363.6 346 59.0
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 6.2e-98 361.7 353 56.7
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 8.1e-98 361.3 346 58.1
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 1.2e-96 357.5 349 57.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 3.4e-96 355.9 343 57.4
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 2.2e-95 353.2 347 56.8
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 3.8e-95 352.4 343 57.1
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 3.8e-95 352.4 357 55.7
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 5.4e-94 348.6 297 60.3
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 7.1e-94 348.2 334 55.7
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 9.2e-94 347.8 393 52.4
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 2.1e-93 346.7 300 61.7
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 2.1e-93 346.7 322 57.1
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 2.7e-93 346.3 342 55.0
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 1.0e-92 344.4 313 57.5
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 3.0e-92 342.8 350 53.4
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 6.6e-92 341.7 345 56.8
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 1.5e-91 340.5 354 55.1
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 2.8e-90 336.3 408 50.7
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 8.9e-89 331.3 321 57.0
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 7.6e-88 328.2 347 55.0
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 1.7e-87 327.0 345 52.8
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 1.3e-84 317.4 378 48.4
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 3.9e-84 315.8 339 49.9
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 9.0e-81 304.7 283 54.8
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.1e-68 262.3 344 50.6
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 3.8e-63 246.1 297 44.8
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 1.6e-61 240.7 245 50.6
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 5.1e-60 235.7 287 49.1
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.1e-59 234.6 221 54.8
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 3.7e-58 229.6 207 57.0
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.5e-56 224.2 294 42.2
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.3e-39 167.9 142 65.5
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 2.6e-35 153.7 284 38.7
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 4.8e-34 149.4 297 33.0
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 9.1e-33 145.2 96 68.8
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 9.4e-30 135.2 143 55.9
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 4.7e-29 132.9 134 59.0
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 2.0e-27 127.5 286 30.1
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 2.8e-26 123.6 105 61.9
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 6.1e-21 105.9 119 48.7
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-20 104.4 303 24.1
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 7.2e-14 82.4 75 49.3
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 4.4e-11 73.2 52 69.2
FAN28G2275 Fragaria x ananassa HOM05D000356 ORTHO05D000265 8.6e-07 58.9 100 43.0


User provided reference genes

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