Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 4.2e-297 1023.8 491 100.0
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 4.1e-252 874.4 490 82.9
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 8.0e-248 860.1 488 82.4
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 8.0e-248 860.1 484 83.9
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 2.2e-245 852.0 484 82.0
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 3.2e-244 848.2 498 79.7
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 4.1e-244 847.8 485 81.6
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 3.9e-242 841.3 482 81.3
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 5.6e-241 837.4 500 80.4
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 1.2e-240 836.3 485 81.0
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.2e-240 836.3 502 78.5
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 2.8e-240 835.1 483 80.3
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 3.6e-240 834.7 483 82.0
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 6.2e-240 833.9 488 80.5
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 6.2e-240 833.9 486 80.2
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 5.2e-239 830.9 483 79.9
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 6.8e-239 830.5 486 79.4
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 6.8e-239 830.5 483 80.7
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 1.5e-238 829.3 483 79.9
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 4.4e-238 827.8 493 78.9
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 5.8e-238 827.4 493 79.9
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 5.8e-238 827.4 484 79.5
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 7.5e-238 827.0 485 79.8
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 7.5e-238 827.0 483 81.4
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 1.7e-237 825.9 483 79.5
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 1.7e-237 825.9 486 79.4
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 2.2e-237 825.5 483 80.5
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 4.9e-237 824.3 481 80.2
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.1e-236 823.2 487 80.5
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 1.9e-236 822.4 527 75.5
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 7.1e-236 820.5 491 78.0
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 1.2e-235 819.7 487 80.1
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 1.2e-235 819.7 484 78.5
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 2.7e-235 818.5 488 79.3
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 6.0e-235 817.4 482 80.1
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 7.8e-235 817.0 544 72.6
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 1.7e-234 815.8 475 80.4
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 3.0e-234 815.1 499 77.2
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 3.0e-234 815.1 488 77.7
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 8.6e-234 813.5 513 76.6
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 2.8e-232 808.5 485 77.7
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 2.8e-232 808.5 488 77.7
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 3.1e-231 805.1 430 87.0
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 5.2e-231 804.3 489 76.5
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 6.8e-231 803.9 487 77.6
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 2.0e-230 802.4 486 77.2
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 9.9e-230 800.0 486 78.6
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 6.4e-229 797.3 488 77.3
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 1.1e-228 796.6 483 78.1
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 1.4e-228 796.2 484 78.5
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 5.4e-228 794.3 486 78.0
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 1.2e-227 793.1 457 81.6
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 2.1e-227 792.3 491 76.8
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 6.0e-227 790.8 485 76.7
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 1.3e-226 789.6 487 76.6
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 2.3e-226 788.9 508 74.6
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 3.0e-226 788.5 494 76.1
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.0e-226 788.5 515 72.2
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 3.0e-226 788.5 487 77.0
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 5.1e-226 787.7 494 75.9
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 5.1e-226 787.7 454 81.3
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 6.6e-226 787.3 484 77.3
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 8.7e-226 786.9 484 76.7
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 7.3e-225 783.9 492 75.8
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 9.0e-223 776.9 493 75.3
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 1.5e-222 776.2 512 75.2
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 2.0e-222 775.8 521 72.7
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 2.6e-222 775.4 487 75.8
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.9e-220 769.2 519 70.3
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 3.0e-218 761.9 483 74.7
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 5.1e-218 761.1 496 73.6
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 7.3e-217 757.3 501 75.0
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 1.3e-216 756.5 484 74.4
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 5.3e-215 751.1 474 72.8
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 2.9e-213 745.3 455 76.0
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 1.4e-212 743.0 561 65.4
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 4.6e-211 738.0 470 73.6
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 4.6e-211 738.0 485 71.8
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 3.9e-210 734.9 462 75.5
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 5.1e-210 734.6 517 68.7
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 8.7e-210 733.8 503 71.8
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 1.7e-205 719.5 482 70.7
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 1.8e-202 709.5 485 70.5
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.8e-202 709.5 484 72.1
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 1.8e-202 709.5 509 69.4
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 4.0e-199 698.4 494 69.4
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 2.5e-196 689.1 383 85.6
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 4.6e-195 684.9 468 67.7
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 1.6e-187 659.8 482 68.5
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 4.1e-183 645.2 492 62.0
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 2.6e-182 642.5 475 63.6
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 1.0e-181 640.6 473 63.0
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 8.5e-181 637.5 382 79.6
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 2.3e-178 629.4 384 76.6
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 3.9e-178 628.6 382 79.1
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 2.0e-177 626.3 473 62.2
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 2.4e-167 592.8 391 73.7
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 7.0e-167 591.3 380 74.7
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 3.1e-159 565.8 473 59.2
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 8.5e-157 557.8 392 68.6
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.5e-156 556.2 360 72.8
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.4e-154 550.4 346 76.0
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 7.5e-153 544.7 480 56.2
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.4e-146 523.9 335 74.6
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 2.2e-144 516.5 359 71.6
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 6.1e-139 498.4 483 54.9
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 6.2e-131 471.9 256 84.8
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 1.6e-126 457.2 389 59.4
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 8.6e-125 451.4 464 50.0
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 1.5e-124 450.7 458 50.0
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 4.4e-121 439.1 288 70.5
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 8.1e-115 418.3 281 69.0
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 4.0e-114 416.0 346 59.8
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 3.0e-93 346.7 187 82.4
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.4e-73 280.0 163 81.6
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 6.3e-67 259.2 477 36.5
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 7.2e-55 219.2 107 92.5
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.1e-46 191.0 94 87.2
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 2.6e-36 157.5 110 71.8
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 1.8e-34 151.4 69 95.7
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 3.5e-33 147.1 81 84.0
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 5.0e-32 143.3 93 71.0
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 1.4e-29 135.2 135 53.3
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 2.2e-27 127.9 213 34.7
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 1.2e-25 122.1 70 80.0
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.5e-23 115.2 103 58.3
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 2.8e-22 110.9 199 34.7
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 4.1e-18 97.1 55 85.5
RcHm_v2.0_Chr7g0201231 Rosa chinensis HOM05D005885 ORTHO05D342624 4.9e-11 73.6 50 70.0
BolC1t01666H Brassica oleracea HOM05D005885 ORTHO05D023940 4.7e-06 57.0 50 54.0


User provided reference genes

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