Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 6.3e-78 293.9 135 100.0
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 5.0e-67 257.7 118 99.2
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.6e-41 172.9 120 67.5
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 4.7e-41 171.4 119 62.2
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 2.6e-39 165.6 119 61.3
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 6.4e-38 161.0 118 61.0
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.4e-37 159.8 117 63.2
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 2.4e-37 159.1 118 61.0
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 5.4e-37 157.9 117 62.4
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 9.2e-37 157.1 131 57.3
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 2.1e-36 156.0 117 63.2
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 3.5e-36 155.2 117 62.4
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 4.6e-36 154.8 119 61.3
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 6.0e-36 154.5 117 59.8
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 7.8e-36 154.1 117 60.7
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.3e-35 153.3 123 60.2
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 1.7e-35 152.9 134 53.0
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 3.9e-35 151.8 116 55.2
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 6.6e-35 151.0 116 60.3
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 1.1e-34 150.2 121 59.5
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 1.5e-34 149.8 117 59.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 1.9e-34 149.4 118 58.5
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 2.5e-34 149.1 118 57.6
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 3.3e-34 148.7 117 58.1
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.3e-34 148.7 116 62.9
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 4.3e-34 148.3 117 60.7
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 5.6e-34 147.9 116 56.9
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 7.3e-34 147.5 117 55.6
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 9.6e-34 147.1 117 58.1
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 2.1e-33 146.0 120 54.2
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 2.1e-33 146.0 117 55.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.8e-33 145.6 124 52.4
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 2.8e-33 145.6 124 52.4
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.8e-33 145.6 117 57.3
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 3.6e-33 145.2 115 52.2
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 3.6e-33 145.2 116 57.8
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 3.6e-33 145.2 117 55.6
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 6.2e-33 144.4 117 57.3
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 8.1e-33 144.1 117 57.3
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.1e-32 143.7 117 56.4
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 1.8e-32 142.9 117 56.4
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 3.1e-32 142.1 117 55.6
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 4.0e-32 141.7 116 56.0
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 4.0e-32 141.7 117 53.8
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 5.2e-32 141.4 117 55.6
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 8.9e-32 140.6 117 54.7
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 8.9e-32 140.6 116 54.3
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 1.5e-31 139.8 118 55.1
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 1.5e-31 139.8 118 55.1
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.5e-31 139.8 116 55.2
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.0e-31 139.4 119 55.5
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.0e-31 139.4 119 55.5
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.6e-31 139.0 119 55.5
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 2.6e-31 139.0 118 53.4
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 4.4e-31 138.3 117 55.6
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 4.4e-31 138.3 118 54.2
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 5.8e-31 137.9 118 54.2
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.8e-31 137.9 118 54.2
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 9.9e-31 137.1 117 54.7
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 1.7e-30 136.3 116 53.4
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 2.2e-30 136.0 117 53.8
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.2e-30 136.0 116 53.4
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 2.9e-30 135.6 123 52.8
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 4.9e-30 134.8 117 52.1
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 4.9e-30 134.8 117 55.6
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 6.4e-30 134.4 118 54.2
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 8.4e-30 134.0 116 53.4
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 8.4e-30 134.0 116 52.6
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 8.4e-30 134.0 117 53.8
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 8.4e-30 134.0 118 52.5
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 1.1e-29 133.7 116 52.6
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 1.1e-29 133.7 118 54.2
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.1e-29 133.7 116 52.6
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.4e-29 133.3 118 50.8
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 1.9e-29 132.9 116 53.4
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.9e-29 132.9 122 53.3
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.9e-29 132.9 116 52.6
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 4.2e-29 131.7 117 51.3
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 5.4e-29 131.3 117 53.0
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 9.3e-29 130.6 116 51.7
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 9.3e-29 130.6 117 50.4
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.6e-28 129.8 118 51.7
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 4.6e-28 128.3 116 50.9
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.3e-27 126.7 116 49.1
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.3e-27 125.9 122 50.8
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 3.9e-27 125.2 120 50.8
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 7.3e-26 120.9 118 48.3
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 3.6e-25 118.6 122 44.3
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 1.1e-24 117.1 131 42.0
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 9.0e-24 114.0 118 49.2
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.2e-23 113.6 118 49.2
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 1.2e-23 113.6 118 49.2
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 5.8e-23 111.3 113 47.8
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 5.8e-23 111.3 112 45.5
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 9.9e-23 110.5 83 61.4
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 2.2e-22 109.4 118 44.1
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 8.4e-22 107.5 117 49.6
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 5.4e-21 104.8 116 42.2
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 9.3e-21 104.0 83 61.4
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 4.6e-20 101.7 85 55.3
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 6.0e-20 101.3 103 47.6
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 1.0e-19 100.5 78 56.4
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 1.3e-19 100.1 104 50.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.8e-19 99.8 100 48.0
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.3e-19 99.4 122 39.3
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 3.6e-17 92.0 124 38.7
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 3.1e-16 89.0 85 48.2
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 3.1e-16 89.0 75 56.0
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 9.9e-15 84.0 155 30.3
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 4.0e-08 62.0 50 52.0


User provided reference genes

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