Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 4.3e-176 622.1 570 100.0
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 1.4e-174 617.1 572 99.7
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 1.3e-127 461.1 585 82.9
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 1.1e-126 458.0 336 86.3
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 2.1e-122 443.7 336 83.9
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 5.1e-121 439.1 337 83.4
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 1.2e-117 427.9 336 81.2
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 3.8e-116 422.9 337 80.1
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 3.8e-116 422.9 337 80.1
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 7.2e-115 418.7 332 80.1
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 1.2e-114 417.9 337 79.8
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 3.6e-114 416.4 318 84.0
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 7.9e-114 415.2 331 80.1
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 1.8e-113 414.1 316 85.1
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 1.1e-112 411.4 336 79.2
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 1.3e-111 407.9 336 79.5
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 2.2e-111 407.1 305 85.9
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 1.8e-110 404.1 336 76.8
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 2.4e-110 403.7 335 77.3
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 3.1e-110 403.3 307 83.4
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 4.1e-110 402.9 336 78.3
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 4.1e-110 402.9 324 80.6
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 5.3e-110 402.5 307 83.7
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 7.0e-110 402.1 336 78.3
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 2.0e-109 400.6 310 82.6
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 1.0e-108 398.3 331 78.9
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 1.0e-108 398.3 337 77.4
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 1.3e-108 397.9 337 75.4
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 5.0e-108 396.0 336 76.5
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 2.5e-107 393.7 307 82.7
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 2.7e-106 390.2 337 61.4
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 1.8e-105 387.5 336 75.9
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 2.3e-105 387.1 336 75.6
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 1.2e-104 384.8 336 75.9
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 2.0e-104 384.0 315 79.0
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 1.1e-102 378.3 306 79.1
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 1.4e-102 377.9 306 80.7
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 1.8e-102 377.5 337 75.4
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 3.1e-102 376.7 316 78.2
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 5.3e-102 375.9 303 79.9
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 5.3e-102 375.9 337 75.4
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 7.0e-102 375.6 322 75.8
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 1.2e-101 374.8 336 74.7
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 1.6e-101 374.4 307 72.0
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 1.6e-101 374.4 295 82.0
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 5.9e-101 372.5 301 81.4
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 7.7e-101 372.1 295 82.0
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 7.7e-101 372.1 296 75.7
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 1.0e-100 371.7 295 82.7
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 1.0e-100 371.7 343 73.2
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 6.5e-100 369.0 337 74.2
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 8.5e-100 368.6 295 82.4
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.1e-99 368.2 336 73.2
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.5e-99 367.9 295 82.0
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 1.9e-99 367.5 337 73.6
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.9e-99 367.5 336 73.5
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 2.5e-99 367.1 303 80.5
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 2.5e-99 367.1 305 77.4
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 4.2e-99 366.3 315 75.9
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 4.2e-99 366.3 305 77.4
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 4.2e-99 366.3 345 74.5
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 5.5e-99 365.9 336 73.2
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 9.4e-99 365.2 337 74.2
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 9.4e-99 365.2 305 77.7
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 1.2e-98 364.8 353 57.5
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 1.6e-98 364.4 336 73.8
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 2.1e-98 364.0 336 72.9
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 6.1e-98 362.5 341 73.3
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 8.0e-98 362.1 337 73.3
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 8.0e-98 362.1 331 73.4
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 1.0e-97 361.7 330 73.3
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.4e-97 361.3 303 62.7
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 1.4e-97 361.3 325 75.1
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 1.8e-97 360.9 302 79.1
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 1.8e-97 360.9 305 76.4
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 3.0e-97 360.1 336 72.6
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 4.0e-97 359.8 304 77.3
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 1.5e-96 357.8 299 78.3
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 1.5e-96 357.8 324 72.5
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 2.2e-95 354.0 302 76.8
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 2.8e-95 353.6 308 78.2
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 4.8e-95 352.8 324 74.1
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 1.1e-94 351.7 303 75.9
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 3.1e-94 350.1 298 77.5
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 8.6e-92 342.0 312 75.0
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 4.7e-90 336.3 337 71.2
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 1.8e-89 334.3 337 70.9
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 3.0e-89 333.6 337 70.9
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 4.0e-89 333.2 303 71.6
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 1.4e-86 324.7 337 69.7
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 1.8e-86 324.3 317 72.6
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 8.6e-84 315.5 337 68.8
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 1.8e-81 307.8 293 76.1
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 3.5e-77 293.5 291 70.1
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 7.8e-77 292.4 292 72.6
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 8.6e-76 288.9 316 52.5
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 4.7e-74 283.1 182 78.6
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 4.4e-72 276.6 283 72.1
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 1.1e-62 245.4 211 84.8
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 6.6e-60 236.1 134 83.6
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 7.3e-59 232.6 179 67.0
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 4.6e-53 213.4 146 69.9
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 3.4e-48 197.2 196 79.6
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 2.5e-43 181.0 103 85.4
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 7.3e-43 179.5 125 71.2
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 3.8e-39 167.2 103 77.7
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 7.6e-32 142.9 261 50.2
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 1.7e-31 141.7 262 49.6
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 2.4e-30 137.9 298 34.2
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 2.3e-28 131.3 266 44.0
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 5.3e-25 120.2 82 72.0
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 1.9e-22 111.7 78 71.8
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 1.2e-21 109.0 74 71.6
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 3.1e-17 94.4 72 66.7
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 4.8e-10 70.5 56 66.1
Lj5g0013792 Lotus japonicus HOM05D006642 ORTHO05D008856 3.4e-08 64.3 48 60.4
Ca_27070_v3 Cicer arietinum L. HOM05D002503 ORTHO05D009151 1.7e-07 62.0 113 26.5
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 2.2e-07 61.6 113 28.3
MBI02_g40094_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D027104 2.5e-06 58.2 31 93.5
Lj1A585G40 Lonicera japonica HOM05D006642 ORTHO05D027104 3.2e-06 57.8 31 90.3
MBI04_g27244_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D009920 7.2e-06 56.6 94 35.1
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 9.4e-06 56.2 107 31.8


User provided reference genes

Program Settings