Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000572 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.4e-81 306.2 151 100.0
CSS0011029 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.3e-68 263.1 151 88.7
CSS0013740 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 2.3e-68 262.3 150 86.0
Rhsim03G0116200 Rhododendron simsii HOM05D003507 ORTHO05D004324 4.3e-67 258.1 156 83.3
Dinv36393 Davidia involucrata HOM05D003507 ORTHO05D004324 1.8e-65 252.7 156 82.1
vmacro07121 Vaccinium macrocarpon HOM05D003507 ORTHO05D004324 6.9e-65 250.8 156 80.8
Actinidia18606 Actinidia chinensis HOM05D003507 ORTHO05D004324 2.0e-64 249.2 156 81.4
Haze_16857 Corylus avellana HOM05D003507 ORTHO05D004324 2.6e-64 248.8 156 80.1
Oeu013840.1 Olea europaea HOM05D003507 ORTHO05D004324 7.6e-64 247.3 156 79.5
Cfa001677 Carpinus fangiana HOM05D003507 ORTHO05D004324 1.3e-63 246.5 156 78.8
Rhsim09G0148300 Rhododendron simsii HOM05D003507 ORTHO05D004324 2.2e-63 245.7 156 79.5
Lj2A20T45 Lonicera japonica HOM05D003507 ORTHO05D004324 4.9e-63 244.6 156 79.5
VMungo0720G1021 Vigna mungo HOM05D003507 ORTHO05D004324 1.1e-62 243.4 156 76.9
arahy.Tifrunner.gnm1.ann1.X5QL3X Arachis hypogaea HOM05D003507 ORTHO05D004324 5.4e-62 241.1 163 74.8
Glyma.02G165500 Glycine max HOM05D003507 ORTHO05D004324 7.1e-62 240.7 156 76.3
PGR142G1627 Punica granatum HOM05D003507 ORTHO05D004324 9.3e-62 240.4 156 76.9
Migut.F01958 Erythranthe guttata HOM05D003507 ORTHO05D004324 1.2e-61 240.0 156 76.9
Phvul.007G245200 Phaseolus vulgaris HOM05D003507 ORTHO05D004324 1.2e-61 240.0 156 76.3
Nn2g13785 Nelumbo nucifera HOM05D003507 ORTHO05D004324 1.6e-61 239.6 156 77.6
Nn6g35287 Nelumbo nucifera HOM05D003507 ORTHO05D004324 2.1e-61 239.2 156 76.3
CAN.G1121.6 Capsicum annuum HOM05D003507 ORTHO05D004324 3.5e-61 238.4 156 76.3
Psat6g130440 Pisum sativum HOM05D003507 ORTHO05D004324 4.6e-61 238.0 156 76.9
SalBow4G0138 Salvia bowleyana HOM05D003507 ORTHO05D004324 6.0e-61 237.7 156 75.6
CSS0014006 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.0e-60 236.9 156 79.5
CSS0018584 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.0e-60 236.9 156 79.5
MBI18_g28045_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 1.3e-60 236.5 156 75.6
Sed0023455 Sechium edule HOM05D003507 ORTHO05D004324 1.3e-60 236.5 156 76.3
TPR.G7608 Trifolium pratense HOM05D003507 ORTHO05D004324 1.8e-60 236.1 156 75.6
CiPaw.02G172300 Carya illinoinensis HOM05D003507 ORTHO05D004324 3.0e-60 235.3 156 75.0
Nitab4.5_0001659g0110 Nicotiana tabacum HOM05D003507 ORTHO05D004324 3.0e-60 235.3 156 74.4
CANSAT56G3424 Cannabis sativa HOM05D003507 ORTHO05D004324 3.9e-60 235.0 156 75.0
vmacro04843 Vaccinium macrocarpon HOM05D003507 ORTHO05D004324 5.1e-60 234.6 156 76.9
Nitab4.5_0027540g0010 Nicotiana tabacum HOM05D003507 ORTHO05D004324 6.7e-60 234.2 156 73.7
Sc20g0001600 Simmondsia chinensis HOM05D003507 ORTHO05D004324 6.7e-60 234.2 156 75.6
Manes.10G050100 Manihot esculenta HOM05D003507 ORTHO05D004324 8.7e-60 233.8 156 77.6
MSTRG.27484 Avicennia marina HOM05D003507 ORTHO05D004324 1.1e-59 233.4 156 73.7
ClCG08G007670 Citrullus lanatus HOM05D003507 ORTHO05D004324 1.5e-59 233.0 156 75.6
Oeu000789.2 Olea europaea HOM05D003507 ORTHO05D004324 2.5e-59 232.3 199 62.3
COL.COLO4_17137 Corchorus olitorius HOM05D003507 ORTHO05D004324 3.3e-59 231.9 156 76.3
Gorai.012G005900 Gossypium raimondii HOM05D003507 ORTHO05D004324 3.3e-59 231.9 156 75.0
Sed0010237 Sechium edule HOM05D003507 ORTHO05D004324 3.3e-59 231.9 156 74.4
MSTRG.9152 Avicennia marina HOM05D003507 ORTHO05D004324 4.3e-59 231.5 156 75.0
Ca_11760_v3 Cicer arietinum L. HOM05D003507 ORTHO05D004324 5.6e-59 231.1 156 75.0
Medtr1g050720 Medicago truncatula HOM05D003507 ORTHO05D004324 5.6e-59 231.1 156 73.7
ECA233G4141 Erigeron canadensis HOM05D003507 ORTHO05D004324 7.4e-59 230.7 156 73.7
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.8e-58 228.8 156 75.0
FAN10G1468 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.8e-58 228.8 156 75.0
FvH4_7g18820 Fragaria vesca HOM05D003507 ORTHO05D004324 6.2e-58 227.6 156 74.4
FAN01G0276 Fragaria x ananassa HOM05D003507 ORTHO05D004324 6.2e-58 227.6 156 75.0
FAN06G1568 Fragaria x ananassa HOM05D003507 ORTHO05D004324 6.2e-58 227.6 156 74.4
FAN06G2975 Fragaria x ananassa HOM05D003507 ORTHO05D004324 6.2e-58 227.6 156 74.4
RcHm_v2.0_Chr1g0362611 Rosa chinensis HOM05D003507 ORTHO05D004324 8.1e-58 227.3 156 74.4
unitig_88.g27816 Utricularia gibba HOM05D003507 ORTHO05D004324 8.1e-58 227.3 156 69.9
MELO3C019820.2 Cucumis melo HOM05D003507 ORTHO05D004324 1.1e-57 226.9 156 73.1
FAN10G2698 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.1e-57 226.9 156 74.4
CsaV3_6G036660 Cucumis sativus L. HOM05D003507 ORTHO05D004324 1.8e-57 226.1 156 72.4
Aa31LG1G21080 Aethionema arabicum HOM05D003507 ORTHO05D004324 2.4e-57 225.7 156 71.2
ATR0219G019 Amborella trichopoda HOM05D003507 ORTHO05D004324 2.4e-57 225.7 156 69.9
Sp3g08640 Schrenkiella parvula HOM05D003507 ORTHO05D004324 3.1e-57 225.3 156 70.5
Lsat_1_v5_gn_8_20780 Lactuca sativa HOM05D003507 ORTHO05D004324 5.3e-57 224.6 156 71.2
Prupe.2G209000 Prunus persica HOM05D003507 ORTHO05D004324 5.3e-57 224.6 156 74.4
Ah.11g040810 Amaranthus hybridus HOM05D003507 ORTHO05D004324 9.0e-57 223.8 150 72.7
RhsimUnG0185700 Rhododendron simsii HOM05D003507 ORTHO05D004324 9.0e-57 223.8 156 74.4
AL3G21700 Arabidopsis lyrata HOM05D003507 ORTHO05D004324 2.0e-56 222.6 156 69.9
AL491U10020 Arabidopsis lyrata HOM05D003507 ORTHO05D004324 2.0e-56 222.6 156 69.9
BcaB04g21215 Brassica carinata HOM05D003507 ORTHO05D004324 2.6e-56 222.2 156 70.5
C05p57790 Brassica napus HOM05D003507 ORTHO05D004324 2.6e-56 222.2 156 69.2
A01p41890 Brassica napus HOM05D003507 ORTHO05D004324 4.5e-56 221.5 156 69.9
BraA01t04259Z Brassica rapa HOM05D003507 ORTHO05D004324 4.5e-56 221.5 156 69.9
AUR62013829 Chenopodium quinoa HOM05D003507 ORTHO05D004324 4.5e-56 221.5 156 72.4
A05p38780 Brassica napus HOM05D003507 ORTHO05D004324 5.8e-56 221.1 156 69.2
BraA05t22670Z Brassica rapa HOM05D003507 ORTHO05D004324 5.8e-56 221.1 156 69.2
BcaC05g29472 Brassica carinata HOM05D003507 ORTHO05D004324 7.6e-56 220.7 156 68.6
BolC5t34436H Brassica oleracea HOM05D003507 ORTHO05D004324 7.6e-56 220.7 156 68.6
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 9.9e-56 220.3 156 69.2
BcaNung06832 Brassica carinata HOM05D003507 ORTHO05D004324 9.9e-56 220.3 156 68.6
BolC1t05405H Brassica oleracea HOM05D003507 ORTHO05D004324 9.9e-56 220.3 156 69.2
MD07G1170100 Malus domestica HOM05D003507 ORTHO05D004324 9.9e-56 220.3 156 72.4
MD07G1170200 Malus domestica HOM05D003507 ORTHO05D004324 9.9e-56 220.3 156 72.4
CARHR084850 Cardamine hirsuta HOM05D003507 ORTHO05D004324 1.3e-55 219.9 156 68.6
AT3G10370 Arabidopsis thaliana HOM05D003507 ORTHO05D004324 1.7e-55 219.5 156 68.6
Carub.0003s0955 Capsella rubella HOM05D003507 ORTHO05D004324 1.7e-55 219.5 156 68.6
AUR62036906 Chenopodium quinoa HOM05D003507 ORTHO05D004324 2.2e-55 219.2 156 71.2
arahy.Tifrunner.gnm1.ann1.8GLB3P Arachis hypogaea HOM05D003507 ORTHO05D004324 3.8e-55 218.4 156 67.9
arahy.Tifrunner.gnm1.ann1.TAZB16 Arachis hypogaea HOM05D003507 ORTHO05D004324 3.8e-55 218.4 156 67.9
TWI63G0759 Tripterygium wilfordii HOM05D003507 ORTHO05D004324 3.8e-55 218.4 156 71.8
Phvul.007G099000 Phaseolus vulgaris HOM05D003507 ORTHO05D004324 8.4e-55 217.2 156 69.2
Thhalv10020293m.g Eutrema salsugineum HOM05D003507 ORTHO05D004324 1.1e-54 216.9 156 67.9
Glyma.10G207700 Glycine max HOM05D003507 ORTHO05D004324 1.4e-54 216.5 156 69.9
Glyma.20G183100 Glycine max HOM05D003507 ORTHO05D004324 1.4e-54 216.5 156 69.9
Lalb_Chr02g0152061 Lupinus albus HOM05D003507 ORTHO05D004324 1.9e-54 216.1 156 69.2
SGA_v2.0_scaffold62G21389 Striga asiatica HOM05D003507 ORTHO05D004324 2.4e-54 215.7 156 69.9
EL10Ac1g02015 Beta vulgaris HOM05D003507 ORTHO05D004324 7.1e-54 214.2 156 69.2
QL08p054391 Quercus lobata HOM05D003507 ORTHO05D004324 9.3e-54 213.8 156 70.5
QL08p054526 Quercus lobata HOM05D003507 ORTHO05D004324 9.3e-54 213.8 156 69.9
TWI38G0486 Tripterygium wilfordii HOM05D003507 ORTHO05D004324 1.2e-53 213.4 156 70.5
Lj5g0027490 Lotus japonicus HOM05D003507 ORTHO05D004324 3.5e-53 211.8 156 69.9
SMO334G0124 Selaginella moellendorffii HOM05D003507 ORTHO05D004324 3.5e-53 211.8 156 66.0
PSO210G6851 Papaver somniferum HOM05D003507 ORTHO05D004324 1.0e-52 210.3 156 67.9
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 3.0e-52 208.8 156 68.6
PSO210G4234 Papaver somniferum HOM05D003507 ORTHO05D004324 1.5e-51 206.5 156 66.7
Cc02_g10950 Coffea canephora HOM05D003507 ORTHO05D004324 2.5e-51 205.7 156 66.7
Mapoly0025s0008 Marchantia polymorpha HOM05D003507 ORTHO05D004324 2.5e-51 205.7 156 65.4
A07p45220 Brassica napus HOM05D003507 ORTHO05D004324 4.3e-51 204.9 156 64.1
TPR.G38613 Trifolium pratense HOM05D003507 ORTHO05D004324 4.3e-51 204.9 156 66.7
C06p54060 Brassica napus HOM05D003507 ORTHO05D004324 5.6e-51 204.5 156 64.1
TAR623G1746 Trochodendron aralioides HOM05D003507 ORTHO05D004324 5.6e-51 204.5 156 68.6
Manes.07G133156 Manihot esculenta HOM05D003507 ORTHO05D004324 9.6e-51 203.8 156 67.9
Duzib114G0668 Durio zibethinus HOM05D003507 ORTHO05D004324 1.6e-50 203.0 156 67.3
GSVIVG01016222001 Vitis vinifera HOM05D003507 ORTHO05D004324 1.6e-50 203.0 156 67.9
BraA07t32025Z Brassica rapa HOM05D003507 ORTHO05D004324 2.1e-50 202.6 156 63.5
Sabra10G0175000 Salix brachista HOM05D003507 ORTHO05D004324 2.1e-50 202.6 156 66.7
DCAR_019087 Daucus carota HOM05D003507 ORTHO05D004324 2.8e-50 202.2 156 66.7
Thecc.10G083100 Theobroma cacao HOM05D003507 ORTHO05D004324 3.7e-50 201.8 156 67.3
BolC6t40419H Brassica oleracea HOM05D003507 ORTHO05D004324 4.8e-50 201.4 156 63.5
CiPaw.01G268800 Carya illinoinensis HOM05D003507 ORTHO05D004324 4.8e-50 201.4 156 66.0
Duzib128G1288 Durio zibethinus HOM05D003507 ORTHO05D004324 8.1e-50 200.7 156 67.3
Gohir.A06G168100 Gossypium hirsutum HOM05D003507 ORTHO05D004324 8.1e-50 200.7 156 66.7
Gohir.D06G175500 Gossypium hirsutum HOM05D003507 ORTHO05D004324 8.1e-50 200.7 156 66.7
Gorai.010G205900 Gossypium raimondii HOM05D003507 ORTHO05D004324 1.1e-49 200.3 156 66.0
Gohir.D04G004700 Gossypium hirsutum HOM05D003507 ORTHO05D004324 1.8e-49 199.5 156 66.7
THA.LOC104826896 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 2.4e-49 199.1 156 64.7
Pp3c4_15510 Physcomitrium patens HOM05D003507 ORTHO05D004324 3.1e-49 198.7 156 64.1
Potri.010G226700 Populus trichocarpa HOM05D003507 ORTHO05D004324 3.1e-49 198.7 156 66.0
arahy.Tifrunner.gnm1.ann1.WAL6D9 Arachis hypogaea HOM05D003507 ORTHO05D004324 6.9e-49 197.6 275 44.7
THA.LOC104816425 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 6.9e-49 197.6 156 63.5
Sc09g0006070 Simmondsia chinensis HOM05D003507 ORTHO05D004324 2.0e-48 196.1 156 63.5
HanXRQChr08g0218541 Helianthus annuus HOM05D003507 ORTHO05D004324 4.5e-48 194.9 156 64.7
Aqoxy1G01151 Aquilegia oxysepala HOM05D003507 ORTHO05D004324 5.8e-48 194.5 156 63.5
SHI08893 Sapria himalayana HOM05D003507 ORTHO05D004324 7.6e-48 194.1 156 62.2
Gohir.A05G411300 Gossypium hirsutum HOM05D003507 ORTHO05D004324 1.0e-47 193.7 156 66.0
MD01G1103300 Malus domestica HOM05D003507 ORTHO05D004324 1.3e-47 193.4 156 66.7
Eucgr.G02866 Eucalyptus grandis HOM05D003507 ORTHO05D004324 1.1e-46 190.3 156 62.8
Zm00001eb419210 Zea mays HOM05D003507 ORTHO05D004324 1.1e-46 190.3 156 60.9
CSS0034710 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 3.2e-46 188.7 151 67.5
Lsat_1_v5_gn_9_70220 Lactuca sativa HOM05D003507 ORTHO05D004324 5.5e-46 188.0 156 62.2
ECA232G4763 Erigeron canadensis HOM05D003507 ORTHO05D004324 9.3e-46 187.2 156 62.8
VMungo0720G1977 Vigna mungo HOM05D003507 ORTHO05D004324 3.5e-45 185.3 156 60.9
SEGI_18211 Sequoiadendron giganteum HOM05D003507 ORTHO05D004324 2.3e-44 182.6 156 58.3
Ca_10543_v3 Cicer arietinum L. HOM05D003507 ORTHO05D004324 3.9e-44 181.8 156 61.5
Os04g0224900 Oryza sativa ssp. japonica HOM05D003507 ORTHO05D004324 6.7e-44 181.0 156 58.3
Hund22747 Selenicereus undatus HOM05D003507 ORTHO05D004324 1.5e-43 179.9 156 60.3
VMungo0251G1768 Vigna mungo HOM05D003507 ORTHO05D004324 1.5e-43 179.9 156 59.6
MBI17_g03745_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 2.5e-43 179.1 156 55.8
Psat6g180000 Pisum sativum HOM05D003507 ORTHO05D004324 9.6e-43 177.2 156 60.3
PSO541G4906 Papaver somniferum HOM05D003507 ORTHO05D004324 1.6e-42 176.4 156 56.4
HanXRQChr17g0564181 Helianthus annuus HOM05D003507 ORTHO05D004324 2.1e-42 176.0 156 60.9
CBR_g49884 Chara braunii HOM05D003507 ORTHO05D000048 1.8e-41 172.9 156 58.3
TAR627G0142 Trochodendron aralioides HOM05D003507 ORTHO05D004324 6.9e-41 171.0 156 57.1
ATR0680G388 Amborella trichopoda HOM05D003507 ORTHO05D004324 2.0e-40 169.5 156 55.8
Aqoxy1G02537 Aquilegia oxysepala HOM05D003507 ORTHO05D004324 2.6e-40 169.1 156 55.8
HPP92_008484 Vanilla planifolia HOM05D003507 ORTHO05D004324 1.1e-38 163.7 156 54.5
THA.LOC104824233 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 2.5e-38 162.5 156 52.6
BcaNung06834 Brassica carinata HOM05D003507 ORTHO05D004324 5.3e-33 144.8 120 62.5
Dinv31230 Davidia involucrata HOM05D003507 ORTHO05D004324 6.9e-33 144.4 99 73.7
Cpa.g.sc2869.1 Carica papaya HOM05D003507 ORTHO05D004324 6.7e-28 127.9 100 64.0
CDE02G2605 Ceratophyllum demersum HOM05D003507 ORTHO05D004324 8.2e-26 120.9 86 67.4
CiPaw.14G115300 Carya illinoinensis HOM05D003507 ORTHO05D004324 1.8e-25 119.8 150 49.3
AagrBONN_evm.TU.Sc2ySwM_117.1947 Anthoceros agrestis HOM05D003507 ORTHO05D004324 1.3e-23 113.6 86 64.0
CBR_g56910 Chara braunii HOM05D003507 ORTHO05D004324 5.5e-22 108.2 177 37.9
MBI17_g46352_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 4.7e-21 105.1 155 41.9
Cre13.g577450 Chlamydomonas reinhardtii HOM05D003507 ORTHO05D004324 1.0e-20 104.0 178 38.2
Nn2g13805 Nelumbo nucifera HOM05D003507 ORTHO05D004324 2.3e-20 102.8 64 81.2
MCO16G042 Micromonas commoda HOM05D003507 ORTHO05D004324 2.6e-16 89.4 163 35.0
Cfa022775 Carpinus fangiana HOM05D003507 ORTHO05D004324 3.8e-15 85.5 182 30.8


User provided reference genes

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