Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 1.8e-136 489.2 239 100.0
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 3.3e-114 415.2 239 85.4
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 2.2e-113 412.5 239 84.9
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 8.2e-113 410.6 240 84.6
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.8e-112 409.5 240 83.8
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 2.4e-112 409.1 240 84.6
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 1.6e-87 326.6 248 68.5
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 4.5e-87 325.1 250 66.8
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 4.7e-84 315.1 247 68.0
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 3.7e-81 305.4 242 67.8
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 4.1e-80 302.0 244 65.6
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 7.0e-80 301.2 243 66.7
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 9.2e-80 300.8 240 65.8
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 9.2e-80 300.8 245 64.9
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 1.0e-78 297.4 250 64.4
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 3.8e-78 295.4 241 63.9
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 6.6e-78 294.7 245 63.7
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 8.6e-78 294.3 242 62.8
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.5e-77 293.5 232 68.1
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 2.5e-77 292.7 242 64.5
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 5.6e-77 291.6 241 63.5
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 1.2e-76 290.4 240 63.3
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 1.2e-76 290.4 240 62.9
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 1.2e-76 290.4 229 65.1
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 2.8e-76 289.3 244 63.9
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 1.4e-75 287.0 244 63.1
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 1.8e-75 286.6 242 64.0
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 5.2e-75 285.0 180 77.2
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 6.8e-75 284.6 250 62.8
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 6.8e-75 284.6 180 77.8
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 6.8e-75 284.6 180 77.2
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 2.6e-74 282.7 171 80.7
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 3.4e-74 282.3 245 64.1
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 3.4e-74 282.3 227 66.1
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 5.8e-74 281.6 232 64.2
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 1.3e-73 280.4 171 80.1
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.7e-73 280.0 294 55.4
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 2.2e-73 279.6 167 80.8
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 2.2e-73 279.6 160 84.4
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 2.2e-73 279.6 160 84.4
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 3.7e-73 278.9 247 64.0
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.7e-73 278.9 180 76.1
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 3.7e-73 278.9 228 64.9
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 4.9e-73 278.5 245 61.6
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 8.3e-73 277.7 237 62.0
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 1.1e-72 277.3 237 62.0
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 1.8e-72 276.6 183 77.0
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 2.4e-72 276.2 237 61.6
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 2.4e-72 276.2 237 62.0
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 2.7e-71 272.7 171 76.6
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 3.5e-71 272.3 171 77.2
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 3.5e-71 272.3 171 76.6
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 4.6e-71 271.9 171 76.0
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 4.6e-71 271.9 240 61.7
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 6.0e-71 271.6 237 62.0
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 6.0e-71 271.6 156 82.7
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.8e-71 271.2 159 83.0
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 3.9e-70 268.9 272 54.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 8.6e-70 267.7 171 77.2
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 1.5e-69 266.9 220 62.7
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 1.9e-69 266.5 160 81.9
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 3.3e-69 265.8 159 79.9
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 4.3e-69 265.4 163 78.5
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 2.1e-68 263.1 159 78.0
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 2.1e-68 263.1 156 81.4
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 2.8e-68 262.7 234 60.7
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 4.7e-68 261.9 160 76.9
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 1.4e-67 260.4 160 78.1
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 2.3e-67 259.6 172 75.0
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 2.3e-67 259.6 214 61.7
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 4.0e-67 258.8 234 58.5
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 6.8e-67 258.1 196 66.3
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 8.9e-67 257.7 276 53.6
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 8.9e-67 257.7 159 79.9
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 8.9e-67 257.7 212 61.8
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.2e-66 257.3 208 64.4
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 2.6e-66 256.1 158 76.6
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 2.6e-66 256.1 161 76.4
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 2.6e-66 256.1 161 74.5
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 4.4e-66 255.4 157 77.1
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 4.9e-65 251.9 160 76.2
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 6.4e-65 251.5 161 75.2
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 8.3e-65 251.1 154 77.9
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 8.3e-65 251.1 156 78.8
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 1.4e-64 250.4 172 71.5
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 1.9e-64 250.0 160 75.0
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.4e-64 249.6 208 63.0
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 5.4e-64 248.4 295 49.8
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 5.4e-64 248.4 160 73.8
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 7.0e-64 248.1 153 77.1
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 3.5e-63 245.7 175 70.3
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 1.3e-62 243.8 151 76.8
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 2.3e-62 243.0 191 61.8
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 6.6e-62 241.5 176 64.8
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 7.3e-61 238.0 191 66.0
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 9.5e-61 237.7 157 69.4
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 2.8e-60 236.1 150 75.3
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 6.8e-59 231.5 198 61.1
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 6.8e-59 231.5 204 58.8
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 2.0e-58 229.9 160 70.0
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 1.7e-57 226.9 145 73.1
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.1e-56 224.2 205 59.0
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 1.9e-56 223.4 172 66.9
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 3.2e-56 222.6 150 69.3
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 6.2e-52 208.4 162 61.7
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 4.0e-51 205.7 151 64.9
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 4.4e-50 202.2 123 79.7
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 1.3e-49 200.7 120 80.8
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 2.9e-49 199.5 237 45.6
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 6.6e-46 188.3 144 68.8
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.1e-45 187.6 158 60.8
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 6.2e-44 181.8 143 57.3
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 4.6e-39 165.6 157 53.5
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 3.9e-38 162.5 87 86.2
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.1e-36 156.8 138 61.6
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.1e-36 156.8 138 61.6
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 6.7e-30 135.2 131 57.3
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 4.8e-28 129.0 152 53.9
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.7e-25 120.6 117 45.3
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 7.4e-21 105.1 136 44.9
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 7.4e-21 105.1 116 42.2
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 9.6e-21 104.8 120 42.5
Cpa.g.sc10.49 Carica papaya HOM05D006308 ORTHO05D007820 1.5e-18 97.4 109 50.5
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 4.5e-18 95.9 126 37.3
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 1.9e-13 80.5 117 46.2
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 1.3e-09 67.8 38 76.3
Zm00001eb317050 Zea mays HOM05D006308 ORTHO05D007820 1.7e-09 67.4 82 46.3
Actinidia07353 Actinidia chinensis HOM05D006308 ORTHO05D007820 5.0e-09 65.9 46 67.4
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 8.8e-06 55.1 94 37.2


User provided reference genes

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