Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 0.0e+00 1109.4 535 100.0
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 5.9e-220 767.7 509 70.7
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 9.5e-218 760.4 501 70.9
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 2.0e-215 752.7 476 72.9
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 3.4e-215 751.9 484 71.5
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 4.4e-215 751.5 467 73.0
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 3.7e-214 748.4 482 70.5
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 3.7e-214 748.4 482 70.3
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 1.1e-213 746.9 474 72.8
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 7.0e-213 744.2 488 70.9
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 1.6e-212 743.0 484 70.7
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 1.6e-212 743.0 487 70.4
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 1.3e-211 740.0 469 71.9
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 2.3e-211 739.2 478 72.4
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 3.8e-211 738.4 478 71.8
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 1.5e-210 736.5 469 71.9
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 2.5e-210 735.7 467 72.4
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 4.3e-210 734.9 475 71.8
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 4.3e-210 734.9 469 71.9
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 9.5e-210 733.8 489 69.5
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 2.8e-209 732.3 489 69.3
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 1.4e-208 729.9 483 70.8
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 1.4e-208 729.9 501 69.1
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 2.3e-208 729.2 498 68.5
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 4.0e-208 728.4 477 72.1
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.2e-207 726.9 491 69.5
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 1.5e-207 726.5 479 70.6
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 2.0e-207 726.1 464 71.3
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 3.4e-207 725.3 469 71.4
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 3.4e-207 725.3 475 68.6
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 4.4e-207 724.9 481 69.2
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 5.7e-207 724.5 486 70.4
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 7.5e-207 724.2 467 71.9
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 2.9e-206 722.2 477 70.6
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 3.7e-206 721.8 474 70.0
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 4.9e-206 721.5 485 69.3
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 4.9e-206 721.5 495 68.7
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 3.2e-205 718.8 481 70.1
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 4.1e-205 718.4 482 69.5
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 5.4e-205 718.0 487 69.4
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 1.6e-204 716.5 500 68.4
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 2.0e-204 716.1 472 68.6
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 2.0e-204 716.1 469 70.1
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 3.5e-204 715.3 478 70.1
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 1.3e-203 713.4 472 71.0
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 1.7e-203 713.0 480 69.0
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.0e-203 712.2 473 71.2
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 3.9e-203 711.8 476 67.9
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 6.6e-203 711.1 475 68.0
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 6.6e-203 711.1 530 64.0
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 6.6e-203 711.1 487 68.0
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.1e-202 710.3 482 69.3
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 2.5e-202 709.1 472 68.6
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 9.5e-202 707.2 474 70.0
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 9.5e-202 707.2 480 70.0
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 1.6e-201 706.4 472 68.2
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 1.6e-201 706.4 472 68.2
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 2.8e-201 705.7 473 68.1
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 3.6e-201 705.3 533 65.5
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 1.8e-200 703.0 463 71.1
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.1e-200 702.2 511 65.6
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 5.8e-199 698.0 489 67.7
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 9.8e-199 697.2 497 66.0
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 9.8e-199 697.2 527 64.5
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 1.3e-198 696.8 447 72.7
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 2.9e-198 695.7 471 67.1
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 2.9e-198 695.7 487 66.1
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 1.4e-197 693.3 486 67.1
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 9.2e-197 690.6 514 64.0
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 6.0e-196 688.0 472 66.9
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 8.6e-195 684.1 499 65.9
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 2.8e-193 679.1 514 64.6
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 4.0e-192 675.2 501 63.5
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 2.6e-191 672.5 562 59.4
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 4.4e-191 671.8 508 64.8
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 5.8e-191 671.4 465 67.3
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 1.4e-189 666.8 461 67.7
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 4.6e-188 661.8 490 65.7
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 3.9e-187 658.7 429 71.8
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 9.5e-186 654.1 476 63.2
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 2.1e-185 652.9 481 66.3
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 1.8e-184 649.8 482 64.1
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 2.6e-183 646.0 477 62.5
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 5.4e-181 638.3 465 63.4
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 1.1e-178 630.6 500 60.2
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 4.0e-176 622.1 494 61.3
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 2.0e-175 619.8 487 62.8
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 4.4e-175 618.6 463 63.1
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 1.6e-169 600.1 500 59.2
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 6.2e-169 598.2 480 62.3
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.6e-159 566.2 377 68.2
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 4.5e-159 565.5 478 59.2
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 3.8e-158 562.4 387 70.0
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 4.2e-157 558.9 383 69.2
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 2.1e-156 556.6 483 58.0
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 9.0e-152 541.2 379 66.5
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 1.2e-151 540.8 479 56.2
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 2.0e-151 540.0 466 57.1
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 3.8e-150 535.8 385 66.2
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 1.5e-146 523.9 374 65.0
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 7.9e-140 501.5 355 66.8
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 8.2e-137 491.5 393 61.1
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.0e-134 484.6 318 69.2
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 1.0e-134 484.6 461 55.3
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.0e-123 448.0 253 79.8
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 8.8e-123 444.9 451 50.8
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 9.7e-122 441.4 449 48.6
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 2.8e-121 439.9 376 56.4
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.9e-117 427.2 355 59.2
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 8.0e-116 421.8 288 67.4
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.5e-109 401.0 358 55.9
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 4.2e-109 399.4 299 63.9
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 3.7e-105 386.3 342 56.1
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 4.0e-91 339.7 186 79.0
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.5e-71 273.5 151 82.8
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 6.8e-67 259.2 482 35.7
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 1.6e-47 194.9 95 88.4
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.6e-44 184.9 97 82.5
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 9.3e-32 142.5 70 85.7
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 1.2e-31 142.1 73 82.2
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 1.8e-30 138.3 93 66.7
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 5.7e-29 133.3 254 33.1
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.1e-27 129.0 122 54.1
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 5.9e-26 123.2 131 48.9
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 3.8e-25 120.6 123 48.8
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 2.1e-23 114.8 199 36.7
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 1.2e-18 99.0 70 64.3
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 7.2e-16 89.7 54 75.9
RcHm_v2.0_Chr7g0201231 Rosa chinensis HOM05D005885 ORTHO05D342624 7.2e-08 63.2 50 60.0


User provided reference genes

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