Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0926 Ceratophyllum demersum HOM05D001701 ORTHO05D001628 1.0e-288 996.1 530 100.0
CDE02G0509 Ceratophyllum demersum HOM05D001701 ORTHO05D001628 4.1e-221 771.5 541 79.1
CDE11G0074 Ceratophyllum demersum HOM05D001701 ORTHO05D001628 3.3e-82 310.1 171 94.7
Nn6g35043 Nelumbo nucifera HOM05D001701 ORTHO05D001628 1.8e-35 154.8 609 28.9
TAR633G1369 Trochodendron aralioides HOM05D001701 ORTHO05D001628 3.1e-35 154.1 632 28.8
MBI01_g04631_MAGBIO Magnolia biondii HOM05D001701 ORTHO05D001628 3.8e-33 147.1 684 27.2
TAR636G0273 Trochodendron aralioides HOM05D001701 ORTHO05D001628 8.4e-33 146.0 654 29.1
Nn2g14002 Nelumbo nucifera HOM05D001701 ORTHO05D001628 3.2e-32 144.1 603 30.7
TAR623G1555 Trochodendron aralioides HOM05D001701 ORTHO05D001628 4.6e-31 140.2 658 27.7
Haze_19540 Corylus avellana HOM05D001701 ORTHO05D001628 3.1e-27 127.5 633 30.0
Dinv19829 Davidia involucrata HOM05D001701 ORTHO05D001628 1.2e-26 125.6 661 27.2
Cfa016535 Carpinus fangiana HOM05D001701 ORTHO05D001628 1.3e-25 122.1 604 28.6
Actinidia10402 Actinidia chinensis HOM05D001701 ORTHO05D001628 1.0e-22 112.5 646 26.9
Aqoxy2G01400 Aquilegia oxysepala HOM05D001701 ORTHO05D001628 1.1e-21 109.0 638 27.1
Dinv21255 Davidia involucrata HOM05D001701 ORTHO05D001628 3.3e-21 107.5 646 26.8
vmacro08816 Vaccinium macrocarpon HOM05D001701 ORTHO05D001628 2.1e-20 104.8 632 25.8
ATR0820G114 Amborella trichopoda HOM05D001701 ORTHO05D001628 1.4e-19 102.1 675 26.8
MD14G1016100 Malus domestica HOM05D001701 ORTHO05D001628 3.1e-19 100.9 574 27.9
QL07p040525 Quercus lobata HOM05D001701 ORTHO05D001628 6.9e-19 99.8 677 26.1
CDE11G0318 Ceratophyllum demersum HOM05D001701 ORTHO05D001628 7.6e-18 96.3 81 63.0
Oeu039828.1 Olea europaea HOM05D001701 ORTHO05D001628 1.3e-17 95.5 611 25.9
COL.COLO4_29814 Corchorus olitorius HOM05D001701 ORTHO05D001628 1.7e-17 95.1 616 26.8
AUR62033577 Chenopodium quinoa HOM05D001701 ORTHO05D001628 2.2e-17 94.7 61 80.3
AUR62041422 Chenopodium quinoa HOM05D001701 ORTHO05D001628 2.2e-17 94.7 61 80.3
Atru.chr8.1633 Acer truncatum HOM05D001701 ORTHO05D001628 8.4e-17 92.8 590 24.2
Prupe.7G117000 Prunus persica HOM05D001701 ORTHO05D001628 1.1e-16 92.4 650 25.7
Thecc.05G081200 Theobroma cacao HOM05D001701 ORTHO05D001628 1.4e-16 92.0 620 26.5
Duzib106G1187 Durio zibethinus HOM05D001701 ORTHO05D001628 4.2e-16 90.5 613 25.6
GSVIVG01033783001 Vitis vinifera HOM05D001701 ORTHO05D001628 4.2e-16 90.5 512 28.3
Rhsim04G0135800 Rhododendron simsii HOM05D001701 ORTHO05D001628 2.1e-15 88.2 638 25.7
RcHm_v2.0_Chr3g0472161 Rosa chinensis HOM05D001701 ORTHO05D001628 2.1e-15 88.2 620 24.0
Hma1.2p1_0611F.1_g188670 Hydrangea macrophylla HOM05D001701 ORTHO05D001628 6.0e-15 86.7 66 69.7
Peaxi162Scf00433g00028 Petunia axillaris HOM05D001701 ORTHO05D001628 7.9e-15 86.3 635 24.3
FAN02G1270 Fragaria x ananassa HOM05D001701 ORTHO05D001628 1.3e-14 85.5 657 23.3
Gohir.D04G104072 Gossypium hirsutum HOM05D001701 ORTHO05D001628 1.3e-14 85.5 609 25.1
Gohir.D04G104100 Gossypium hirsutum HOM05D001701 ORTHO05D001628 1.3e-14 85.5 609 25.1
Lj2A129T53 Lonicera japonica HOM05D001701 ORTHO05D001628 1.3e-14 85.5 629 25.4
CiPaw.10G005400 Carya illinoinensis HOM05D001701 ORTHO05D001628 3.0e-14 84.3 468 27.1
Gorai.009G407700 Gossypium raimondii HOM05D001701 ORTHO05D001628 3.0e-14 84.3 582 27.1
MD12G1018100 Malus domestica HOM05D001701 ORTHO05D001628 3.0e-14 84.3 618 25.7
Ciclev10010952m.g Citrus clementina HOM05D001701 ORTHO05D001628 5.1e-14 83.6 645 25.6
FAN14G0343 Fragaria x ananassa HOM05D001701 ORTHO05D001628 1.1e-13 82.4 655 22.9
Ca_08966_v3 Cicer arietinum L. HOM05D001701 ORTHO05D001628 1.5e-13 82.0 66 69.7
EL10Ac7g16990 Beta vulgaris HOM05D001701 ORTHO05D001628 2.5e-13 81.3 575 25.9
Gorai.009G408100 Gossypium raimondii HOM05D001701 ORTHO05D001628 2.5e-13 81.3 587 27.6
Hma1.2p1_0084F.1_g043230 Hydrangea macrophylla HOM05D001701 ORTHO05D001628 3.3e-13 80.9 65 66.2
SEGI_37894 Sequoiadendron giganteum HOM05D001701 ORTHO05D001628 4.3e-13 80.5 107 50.5
Gohir.D04G104300 Gossypium hirsutum HOM05D001701 ORTHO05D001628 5.6e-13 80.1 587 27.4
Sabra06G0090400 Salix brachista HOM05D001701 ORTHO05D001628 5.6e-13 80.1 62 69.4
FAN05G2648 Fragaria x ananassa HOM05D001701 ORTHO05D001628 9.6e-13 79.3 656 22.7
Gohir.D04G104200 Gossypium hirsutum HOM05D001701 ORTHO05D001628 9.6e-13 79.3 605 26.1
Phvul.007G223200 Phaseolus vulgaris HOM05D001701 ORTHO05D001628 9.6e-13 79.3 66 71.2
Duzib093G1244 Durio zibethinus HOM05D001701 ORTHO05D001628 1.3e-12 79.0 648 24.1
Gohir.A04G066200 Gossypium hirsutum HOM05D001701 ORTHO05D001628 1.3e-12 79.0 588 27.0
Gorai.009G407800 Gossypium raimondii HOM05D001701 ORTHO05D001628 1.3e-12 79.0 623 25.7
TPR.G10248 Trifolium pratense HOM05D001701 ORTHO05D001628 1.3e-12 79.0 66 68.2
Actinidia31289 Actinidia chinensis HOM05D001701 ORTHO05D001628 2.1e-12 78.2 499 28.5
arahy.Tifrunner.gnm1.ann1.GMIT0H Arachis hypogaea HOM05D001701 ORTHO05D001628 2.1e-12 78.2 69 62.3
FAN05G3351 Fragaria x ananassa HOM05D001701 ORTHO05D001628 2.1e-12 78.2 106 50.9
Gohir.A04G066100 Gossypium hirsutum HOM05D001701 ORTHO05D001628 2.1e-12 78.2 584 26.7
Lalb_Chr25g0288671 Lupinus albus HOM05D001701 ORTHO05D001628 2.1e-12 78.2 63 68.3
Nitab4.5_0006360g0030 Nicotiana tabacum HOM05D001701 ORTHO05D001628 2.1e-12 78.2 651 24.6
PGR004G2327 Punica granatum HOM05D001701 ORTHO05D001628 2.1e-12 78.2 62 74.2
arahy.Tifrunner.gnm1.ann1.H8PMIE Arachis hypogaea HOM05D001701 ORTHO05D001628 4.8e-12 77.0 70 61.4
Glyma.10G066300 Glycine max HOM05D001701 ORTHO05D001628 4.8e-12 77.0 193 37.3
Medtr7g103840 Medicago truncatula HOM05D001701 ORTHO05D001628 4.8e-12 77.0 66 66.7
Solyc09g009120.4 Solanum lycopersicum HOM05D001701 ORTHO05D001628 4.8e-12 77.0 66 65.2
Sopen09g003830 Solanum pennellii HOM05D001701 ORTHO05D001628 4.8e-12 77.0 66 65.2
VMungo0720G0181 Vigna mungo HOM05D001701 ORTHO05D001628 4.8e-12 77.0 65 69.2
ECA233G1602 Erigeron canadensis HOM05D001701 ORTHO05D001628 6.2e-12 76.6 70 62.9
HanXRQChr02g0052321 Helianthus annuus HOM05D001701 ORTHO05D001628 6.2e-12 76.6 71 62.0
Nitab4.5_0000663g0120 Nicotiana tabacum HOM05D001701 ORTHO05D001628 6.2e-12 76.6 657 24.4
Sed0019451 Sechium edule HOM05D001701 ORTHO05D001628 1.1e-11 75.9 67 65.7
Lj5g0024745 Lotus japonicus HOM05D001701 ORTHO05D001628 1.4e-11 75.5 73 63.0
Glyma.03G191200 Glycine max HOM05D001701 ORTHO05D001628 1.8e-11 75.1 89 53.9
Os09g0566100 Oryza sativa ssp. japonica HOM05D001701 ORTHO05D001628 1.8e-11 75.1 59 71.2
Ah.15g091090 Amaranthus hybridus HOM05D001701 ORTHO05D001628 2.4e-11 74.7 508 24.8
Psat3g036120 Pisum sativum HOM05D001701 ORTHO05D001628 2.4e-11 74.7 94 51.1
Glyma.19G191800 Glycine max HOM05D001701 ORTHO05D001628 3.1e-11 74.3 66 65.2
Glyma.19G191900 Glycine max HOM05D001701 ORTHO05D001628 3.1e-11 74.3 66 65.2
FvH4_6g17910 Fragaria vesca HOM05D001701 ORTHO05D001628 4.0e-11 73.9 641 22.8
Zm00001eb096100 Zea mays HOM05D001701 ORTHO05D001628 9.0e-11 72.8 59 69.5
Thhalv10016259m.g Eutrema salsugineum HOM05D001701 ORTHO05D001628 1.2e-10 72.4 62 62.9
PGSC0003DMG400002717 Solanum tuberosum HOM05D001701 ORTHO05D001628 1.2e-10 72.4 94 51.1
ClCG10G019340 Citrullus lanatus HOM05D001701 ORTHO05D001628 2.0e-10 71.6 68 66.2
Phvul.001G186700 Phaseolus vulgaris HOM05D001701 ORTHO05D001628 2.0e-10 71.6 66 63.6
TWI77G0181 Tripterygium wilfordii HOM05D001701 ORTHO05D001628 2.0e-10 71.6 621 24.3
VMungo1383G2052 Vigna mungo HOM05D001701 ORTHO05D001628 2.0e-10 71.6 66 63.6
Gohir.A04G066000 Gossypium hirsutum HOM05D001701 ORTHO05D001628 3.4e-10 70.9 565 26.7
Lsat_1_v5_gn_6_27120 Lactuca sativa HOM05D001701 ORTHO05D001628 3.4e-10 70.9 72 59.7
SHI23890 Sapria himalayana HOM05D001701 ORTHO05D001628 3.4e-10 70.9 59 66.1
Lalb_Chr01g0018321 Lupinus albus HOM05D001701 ORTHO05D001628 4.5e-10 70.5 69 60.9
Actinidia32456 Actinidia chinensis HOM05D001701 ORTHO05D001628 5.8e-10 70.1 128 39.8
CARHR130780 Cardamine hirsuta HOM05D001701 ORTHO05D001628 9.9e-10 69.3 62 61.3
Zm00001eb308220 Zea mays HOM05D001701 ORTHO05D001628 9.9e-10 69.3 59 66.1
MSTRG.19231 Avicennia marina HOM05D001701 ORTHO05D001628 1.3e-09 68.9 55 70.9
CDE11G1229 Ceratophyllum demersum HOM05D001701 ORTHO05D001628 1.3e-09 68.9 42 88.1
Manes.08G021000 Manihot esculenta HOM05D001701 ORTHO05D001628 2.2e-09 68.2 644 23.6
SEGI_05452 Sequoiadendron giganteum HOM05D001701 ORTHO05D001628 2.2e-09 68.2 126 38.1
SEGI_20968 Sequoiadendron giganteum HOM05D001701 ORTHO05D001628 2.2e-09 68.2 126 38.1
AT2G36480 Arabidopsis thaliana HOM05D001701 ORTHO05D001628 2.9e-09 67.8 73 52.1
BcaB02g09350 Brassica carinata HOM05D001201 ORTHO05D001100 2.9e-09 67.8 62 61.3
BcaNung07060 Brassica carinata HOM05D001701 ORTHO05D001628 2.9e-09 67.8 62 61.3
HanXRQChr06g0183011 Helianthus annuus HOM05D001701 ORTHO05D001628 2.9e-09 67.8 68 60.3
Manes.09G058984 Manihot esculenta HOM05D001701 ORTHO05D001628 2.9e-09 67.8 517 25.9
AL4G32660 Arabidopsis lyrata HOM05D001701 ORTHO05D001628 3.8e-09 67.4 73 52.1
BcaC02g11764 Brassica carinata HOM05D001701 ORTHO05D001628 3.8e-09 67.4 62 61.3
BolC4t22808H Brassica oleracea HOM05D001201 ORTHO05D001100 3.8e-09 67.4 62 61.3
Medtr1g061130 Medicago truncatula HOM05D001701 ORTHO05D001628 4.9e-09 67.0 223 31.8
Eucgr.A01542 Eucalyptus grandis HOM05D001701 ORTHO05D001628 6.4e-09 66.6 54 72.2
Sp4g18780 Schrenkiella parvula HOM05D001701 ORTHO05D001628 6.4e-09 66.6 62 61.3
TWI74G1101 Tripterygium wilfordii HOM05D001701 ORTHO05D001628 6.4e-09 66.6 618 24.4
CAN.G824.30 Capsicum annuum HOM05D001701 ORTHO05D001628 1.1e-08 65.9 617 25.4
SGA_v2.0_scaffold184G39925 Striga asiatica HOM05D001701 ORTHO05D001628 1.1e-08 65.9 270 27.0
Aa31LG5G21670 Aethionema arabicum HOM05D001701 ORTHO05D001628 1.4e-08 65.5 62 59.7
C04p65410 Brassica napus HOM05D000722 ORTHO05D001628 1.4e-08 65.5 66 59.1
BolC4t28030H Brassica oleracea HOM05D001701 ORTHO05D001628 1.4e-08 65.5 66 59.1
BraA04t18288Z Brassica rapa HOM05D000722 ORTHO05D001628 1.4e-08 65.5 66 59.1
SalBow5G3297 Salvia bowleyana HOM05D001701 ORTHO05D001628 1.9e-08 65.1 95 46.3
Sopen10g033070 Solanum pennellii HOM05D001701 ORTHO05D001628 1.9e-08 65.1 580 25.2
A04p28010 Brassica napus HOM05D001701 ORTHO05D001628 3.2e-08 64.3 66 59.1
Psat7g007400 Pisum sativum HOM05D001701 ORTHO05D001628 3.2e-08 64.3 68 54.4
unitig_749.g14287 Utricularia gibba HOM05D001701 ORTHO05D001628 3.2e-08 64.3 54 68.5
CsaV3_3G036850 Cucumis sativus L. HOM05D001701 ORTHO05D001628 4.2e-08 63.9 68 63.2
Carub.0004s1829 Capsella rubella HOM05D001701 ORTHO05D001628 5.5e-08 63.5 157 35.0
CAN.G1138.18 Capsicum annuum HOM05D001701 ORTHO05D001628 5.5e-08 63.5 66 56.1
Lalb_Chr06g0173351 Lupinus albus HOM05D001701 ORTHO05D001628 5.5e-08 63.5 66 59.1
BcaC02g07588 Brassica carinata HOM05D001701 ORTHO05D001628 7.1e-08 63.2 68 60.3
FAN09G1993 Fragaria x ananassa HOM05D001701 ORTHO05D001628 7.1e-08 63.2 558 25.1
C04p11600 Brassica napus HOM05D001201 ORTHO05D001100 9.3e-08 62.8 62 59.7
Lsat_1_v5_gn_2_21361 Lactuca sativa HOM05D001701 ORTHO05D001628 9.3e-08 62.8 77 57.1
Solyc10g083590.2 Solanum lycopersicum HOM05D001701 ORTHO05D001628 1.2e-07 62.4 577 25.3
Potri.006G115600 Populus trichocarpa HOM05D001701 ORTHO05D001628 1.6e-07 62.0 655 24.6
MELO3C009434.2 Cucumis melo HOM05D001701 ORTHO05D001628 6.0e-07 60.1 78 55.1
MSTRG.10351 Avicennia marina HOM05D001701 ORTHO05D001628 7.9e-07 59.7 652 23.0
Hund19276 Selenicereus undatus HOM05D001701 ORTHO05D001628 7.9e-07 59.7 500 25.2
THA.LOC104805097 Tarenaya hassleriana HOM05D001701 ORTHO05D001628 7.9e-07 59.7 520 26.9
Cpa.g.sc5.76 Carica papaya HOM05D001701 ORTHO05D001628 1.0e-06 59.3 491 23.6
BcaB06g28948 Brassica carinata HOM05D001701 ORTHO05D001628 1.3e-06 58.9 73 50.7
Sed0017154 Sechium edule HOM05D001701 ORTHO05D001628 1.8e-06 58.5 609 23.3
HPP92_027324 Vanilla planifolia HOM05D001701 ORTHO05D001628 1.8e-06 58.5 592 24.8
Manes.09G059244 Manihot esculenta HOM05D001701 ORTHO05D001628 3.9e-06 57.4 526 25.9
Lalb_Chr21g0315651 Lupinus albus HOM05D001701 ORTHO05D001628 8.7e-06 56.2 66 56.1


User provided reference genes

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