Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0771 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 2.0e-146 522.7 278 100.0
CDE05G3385 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 1.6e-132 476.5 278 91.4
TAR381G0052 Trochodendron aralioides HOM05D000032 ORTHO05D007039 1.7e-78 297.0 279 61.6
Manes.04G035200 Manihot esculenta HOM05D000032 ORTHO05D007039 3.9e-78 295.8 281 59.1
Cpa.g.sc26.76 Carica papaya HOM05D000032 ORTHO05D007039 8.7e-78 294.7 258 66.7
GSVIVG01009983001 Vitis vinifera HOM05D000032 ORTHO05D007039 1.5e-77 293.9 284 62.0
TWI32G0140 Tripterygium wilfordii HOM05D000032 ORTHO05D007039 1.9e-77 293.5 280 60.7
MBI02_g35824_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 9.6e-77 291.2 263 62.4
Nn2g15381 Nelumbo nucifera HOM05D000032 ORTHO05D007039 1.2e-76 290.8 281 60.9
MBI03_g28958_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 2.1e-76 290.0 263 62.4
QL09p029474 Quercus lobata HOM05D000032 ORTHO05D007039 3.6e-76 289.3 278 59.7
Duzib041G0456 Durio zibethinus HOM05D000032 ORTHO05D007039 4.7e-76 288.9 285 58.2
CiPaw.16G019200 Carya illinoinensis HOM05D000032 ORTHO05D007039 1.8e-75 287.0 286 58.0
VMungo0331G2050 Vigna mungo HOM05D000032 ORTHO05D007039 1.8e-75 287.0 281 58.0
Aqoxy5G02326 Aquilegia oxysepala HOM05D000032 ORTHO05D007039 4.0e-75 285.8 299 56.2
Ciclev10000341m.g Citrus clementina HOM05D000032 ORTHO05D007039 6.9e-75 285.0 285 58.9
Glyma.03G001200 Glycine max HOM05D000032 ORTHO05D007039 2.0e-74 283.5 281 56.6
Thecc.08G139100 Theobroma cacao HOM05D000032 ORTHO05D007039 5.8e-74 282.0 263 60.8
Potri.005G185900 Populus trichocarpa HOM05D000032 ORTHO05D007039 7.6e-74 281.6 261 60.5
Rhsim07G0177900 Rhododendron simsii HOM05D003181 ORTHO05D007039 9.9e-74 281.2 262 59.2
arahy.Tifrunner.gnm1.ann1.KPVC5H Arachis hypogaea HOM05D000032 ORTHO05D007039 2.2e-73 280.0 281 56.9
Gohir.A02G068600 Gossypium hirsutum HOM05D000032 ORTHO05D007039 3.8e-73 279.3 287 57.5
Gohir.D02G075100 Gossypium hirsutum HOM05D000032 ORTHO05D007039 4.9e-73 278.9 288 56.9
COL.COLO4_35483 Corchorus olitorius HOM05D000032 ORTHO05D007039 8.4e-73 278.1 263 59.3
Gorai.005G084500 Gossypium raimondii HOM05D000032 ORTHO05D007039 8.4e-73 278.1 288 56.9
Peaxi162Scf00066g01631 Petunia axillaris HOM05D000032 ORTHO05D007039 1.4e-72 277.3 282 58.5
Haze_01423 Corylus avellana HOM05D000032 ORTHO05D007039 3.2e-72 276.2 262 59.5
Dinv25780 Davidia involucrata HOM05D000032 ORTHO05D007039 3.2e-72 276.2 258 61.6
Sabra05G0142000 Salix brachista HOM05D001345 ORTHO05D007039 4.2e-72 275.8 262 60.3
Sed0020079 Sechium edule HOM05D000032 ORTHO05D007039 4.2e-72 275.8 283 59.0
Cfa015213 Carpinus fangiana HOM05D000032 ORTHO05D007039 5.4e-72 275.4 281 56.9
Eucgr.F02760 Eucalyptus grandis HOM05D000032 ORTHO05D007039 7.1e-72 275.0 263 59.3
ClCG10G008660 Citrullus lanatus HOM05D000032 ORTHO05D007039 9.3e-72 274.6 263 60.1
Lj4A689G43 Lonicera japonica HOM05D000032 ORTHO05D007039 9.3e-72 274.6 263 60.1
Phvul.010G059900 Phaseolus vulgaris HOM05D000032 ORTHO05D007039 1.6e-71 273.9 273 56.4
SalBow6G7032 Salvia bowleyana HOM05D000032 ORTHO05D007039 6.0e-71 271.9 286 55.6
Glyma.16G221700 Glycine max HOM05D000032 ORTHO05D007039 7.8e-71 271.6 282 56.7
MELO3C017528.2 Cucumis melo HOM05D000032 ORTHO05D007039 1.0e-70 271.2 283 56.9
TPR.G34855 Trifolium pratense HOM05D000032 ORTHO05D007039 1.3e-70 270.8 279 55.9
Ca_18908_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007039 2.3e-70 270.0 279 55.6
HPP92_015492 Vanilla planifolia HOM05D000032 ORTHO05D007039 6.6e-70 268.5 278 59.0
CsaV3_1G045380 Cucumis sativus L. HOM05D000032 ORTHO05D007039 1.5e-69 267.3 283 56.2
Hund17378 Selenicereus undatus HOM05D000032 ORTHO05D007039 1.5e-69 267.3 265 57.4
Hma1.2p1_0107F.1_g051290 Hydrangea macrophylla HOM05D000032 ORTHO05D007039 1.9e-69 266.9 261 58.2
HanXRQChr15g0473601 Helianthus annuus HOM05D000032 ORTHO05D007039 7.3e-69 265.0 278 56.8
arahy.Tifrunner.gnm1.ann1.5XB3VI Arachis hypogaea HOM05D000032 ORTHO05D007039 9.6e-69 264.6 308 51.9
Oeu045989.1 Olea europaea HOM05D000032 ORTHO05D007039 1.3e-68 264.2 288 56.9
DCAR_014397 Daucus carota HOM05D000032 ORTHO05D007039 1.6e-68 263.8 279 55.9
unitig_52.g17544 Utricularia gibba HOM05D000032 ORTHO05D007039 4.8e-68 262.3 254 58.7
SGA_v2.0_scaffold25G11147 Striga asiatica HOM05D000032 ORTHO05D007039 6.2e-68 261.9 259 57.1
Cc00_g22660 Coffea canephora HOM05D000032 ORTHO05D007039 8.1e-68 261.5 252 59.5
CAN.G313.11 Capsicum annuum HOM05D000032 ORTHO05D007039 1.4e-67 260.8 254 58.3
Lj3g0011799 Lotus japonicus HOM05D000032 ORTHO05D007039 2.4e-67 260.0 285 54.0
vmacro05140 Vaccinium macrocarpon HOM05D000032 ORTHO05D007039 2.4e-67 260.0 289 52.2
ECA248G0200 Erigeron canadensis HOM05D000032 ORTHO05D007039 3.1e-67 259.6 264 58.0
Prupe.2G131100 Prunus persica HOM05D000032 ORTHO05D007039 3.1e-67 259.6 261 59.0
THA.LOC104812064 Tarenaya hassleriana HOM05D000032 ORTHO05D007039 4.0e-67 259.2 284 55.3
Psat7g166920 Pisum sativum HOM05D000032 ORTHO05D007039 5.3e-67 258.8 259 55.6
FAN20G1738 Fragaria x ananassa HOM05D001345 ORTHO05D007039 2.6e-66 256.5 283 54.8
MD07G1108300 Malus domestica HOM05D000032 ORTHO05D007039 2.6e-66 256.5 280 55.4
Lju3549A0T30 Lonicera japonica HOM05D000032 ORTHO05D007039 9.9e-66 254.6 277 54.9
Medtr4g079320 Medicago truncatula HOM05D000032 ORTHO05D007039 9.9e-66 254.6 287 52.6
Lsat_1_v5_gn_1_39880 Lactuca sativa HOM05D000703 ORTHO05D007039 1.7e-65 253.8 286 55.6
PGR042G3397 Punica granatum HOM05D000032 ORTHO05D007039 1.7e-65 253.8 279 54.5
Nitab4.5_0003942g0070 Nicotiana tabacum HOM05D000032 ORTHO05D007039 2.2e-65 253.4 281 54.8
Lalb_Chr13g0294911 Lupinus albus HOM05D000032 ORTHO05D007039 6.4e-65 251.9 295 51.2
FAN27G2140 Fragaria x ananassa HOM05D000032 ORTHO05D007039 8.4e-65 251.5 304 50.3
Migut.N03249 Erythranthe guttata HOM05D000032 ORTHO05D007039 1.4e-64 250.8 316 51.6
Solyc10g009070.3 Solanum lycopersicum HOM05D000032 ORTHO05D007039 5.4e-64 248.8 281 54.1
Actinidia10684 Actinidia chinensis HOM05D000032 ORTHO05D007039 1.2e-63 247.7 260 57.3
Aa31LG4G7090 Aethionema arabicum HOM05D000032 ORTHO05D007039 1.2e-63 247.7 286 52.8
Sopen10g004850 Solanum pennellii HOM05D000032 ORTHO05D007039 1.2e-63 247.7 281 53.7
EL10Ac1g01414 Beta vulgaris HOM05D000032 ORTHO05D007039 3.5e-63 246.1 279 53.0
RcHm_v2.0_Chr6g0277821 Rosa chinensis HOM05D000032 ORTHO05D007039 4.6e-63 245.7 284 51.8
FvH4_2g15160 Fragaria vesca HOM05D000032 ORTHO05D007039 6.0e-63 245.4 285 51.2
FAN24G0655 Fragaria x ananassa HOM05D000032 ORTHO05D007039 1.3e-62 244.2 285 50.9
PSO017G0672 Papaver somniferum HOM05D000032 ORTHO05D007039 6.7e-62 241.9 300 49.3
CARHR070560 Cardamine hirsuta HOM05D000032 ORTHO05D007039 8.7e-62 241.5 286 50.7
PSO478G2531 Papaver somniferum HOM05D000032 ORTHO05D007039 1.1e-61 241.1 300 49.3
FAN15G1637 Fragaria x ananassa HOM05D000032 ORTHO05D007039 1.5e-61 240.7 285 50.9
Zm00001eb179010 Zea mays HOM05D000032 ORTHO05D007039 1.9e-61 240.4 273 54.2
Thhalv10018119m.g Eutrema salsugineum HOM05D000032 ORTHO05D007039 4.3e-61 239.2 261 54.8
Sp5g32190 Schrenkiella parvula HOM05D000032 ORTHO05D007039 4.3e-61 239.2 285 50.9
AL2G37210 Arabidopsis lyrata HOM05D000032 ORTHO05D007039 5.6e-61 238.8 261 52.9
CANSAT80G2781 Cannabis sativa HOM05D000032 ORTHO05D007039 9.6e-61 238.0 207 61.8
Carub.0002s2395 Capsella rubella HOM05D000032 ORTHO05D007039 1.4e-59 234.2 258 51.9
AT1G77030 Arabidopsis thaliana HOM05D000032 ORTHO05D007039 2.0e-58 230.3 268 50.7
AUR62013465 Chenopodium quinoa HOM05D000032 ORTHO05D007039 5.8e-58 228.8 260 53.5
C06p31480 Brassica napus HOM05D000032 ORTHO05D007039 2.4e-56 223.4 285 49.5
BcaB02g07093 Brassica carinata HOM05D000032 ORTHO05D007039 3.2e-56 223.0 282 48.9
BolC6t38280H Brassica oleracea HOM05D000032 ORTHO05D007039 3.2e-56 223.0 282 48.9
SHI09252 Sapria himalayana HOM05D000032 ORTHO05D007039 4.2e-56 222.6 296 45.9
BcaNung04681 Brassica carinata HOM05D000032 ORTHO05D007039 5.5e-56 222.2 291 49.1
Os08g0416100 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007039 5.5e-56 222.2 279 50.2
BraA07t30454Z Brassica rapa HOM05D000032 ORTHO05D007039 7.1e-56 221.9 282 48.6
BcaB02g07095 Brassica carinata HOM05D000032 ORTHO05D007039 2.7e-55 219.9 267 50.9
A07p28090 Brassica napus HOM05D000032 ORTHO05D007039 2.7e-55 219.9 282 48.2
CSS0036844 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007039 1.3e-54 217.6 199 59.3
SMO361G0600 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 5.6e-53 212.2 284 45.8
AUR62007669 Chenopodium quinoa HOM05D000032 ORTHO05D007039 7.4e-53 211.8 283 49.8
ATR0584G252 Amborella trichopoda HOM05D000032 ORTHO05D007039 3.1e-51 206.5 195 59.5
SMO361G0757 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 4.0e-51 206.1 278 45.7
AagrBONN_evm.TU.Sc2ySwM_228.4830 Anthoceros agrestis HOM05D000032 ORTHO05D007039 2.2e-49 200.3 281 42.7
Mapoly0165s0019 Marchantia polymorpha HOM05D000032 ORTHO05D007039 1.1e-48 198.0 268 44.0
Pp3c14_6810 Physcomitrium patens HOM05D000032 ORTHO05D007039 3.2e-48 196.4 280 42.9
BcaNung04684 Brassica carinata HOM05D000032 ORTHO05D007039 8.2e-44 181.8 294 42.5
Glyma.16G116400 Glycine max HOM05D000032 ORTHO05D007039 3.8e-41 172.9 172 54.7
SEGI_17341 Sequoiadendron giganteum HOM05D000032 ORTHO05D007039 6.3e-36 155.6 155 57.4
Nitab4.5_0003348g0030 Nicotiana tabacum HOM05D000032 ORTHO05D007039 5.3e-35 152.5 152 54.6
Sc15g0007470 Simmondsia chinensis HOM05D000032 ORTHO05D007039 1.1e-24 118.2 122 54.9
CBR_g757 Chara braunii HOM05D000032 ORTHO05D007039 9.7e-21 105.1 252 32.1
Thecc.08G140000 Theobroma cacao HOM05D000032 ORTHO05D007039 1.2e-15 88.2 93 57.0
CSS0031522 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007039 1.0e-14 85.1 67 68.7
PRCOL_00001178 Prasinoderma coloniale HOM05D000032 ORTHO05D007039 3.0e-14 83.6 199 32.7
Hma1.2p1_0107F.1_g051280 Hydrangea macrophylla HOM05D000032 ORTHO05D007039 3.3e-13 80.1 65 69.2
Nitab4.5_0003348g0020 Nicotiana tabacum HOM05D000032 ORTHO05D007039 1.3e-12 78.2 59 74.6
C05p33370 Brassica napus HOM05D019533 ORTHO05D020080 3.5e-10 70.1 74 51.4
BolC5t32062H Brassica oleracea HOM05D019533 ORTHO05D020080 7.7e-10 68.9 74 50.0
BolC5t30359H Brassica oleracea HOM05D001251 ORTHO05D020080 3.2e-08 63.5 139 36.7
Cre12.g513701 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D007039 3.2e-08 63.5 111 34.2
DCAR_014399 Daucus carota HOM05D000032 ORTHO05D007039 3.6e-07 60.1 51 60.8


User provided reference genes

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