Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0192 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 0.0e+00 1115.9 563 100.0
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 2.4e-240 835.5 549 75.6
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.5e-239 831.6 549 74.9
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 3.0e-230 802.0 549 73.6
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 7.3e-229 797.3 549 72.3
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 6.2e-228 794.3 549 72.1
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 1.4e-227 793.1 546 72.0
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 4.0e-227 791.6 551 71.3
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 5.3e-227 791.2 549 73.0
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 6.9e-227 790.8 549 71.9
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 1.2e-226 790.0 549 71.6
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 5.8e-226 787.7 549 72.1
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 9.9e-226 786.9 549 71.6
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.9e-225 785.4 549 71.2
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 8.4e-225 783.9 549 70.7
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 1.1e-224 783.5 546 71.2
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 1.4e-224 783.1 549 70.7
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 2.4e-224 782.3 549 71.0
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 5.4e-224 781.2 546 70.7
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 1.2e-223 780.0 546 71.1
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 1.6e-223 779.6 546 70.5
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 3.5e-223 778.5 546 70.7
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 7.9e-223 777.3 550 69.8
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 1.3e-222 776.5 549 70.1
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 2.3e-222 775.8 550 70.4
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 3.0e-222 775.4 549 70.1
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 3.0e-222 775.4 549 70.3
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 3.9e-222 775.0 549 69.9
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 5.1e-222 774.6 549 70.3
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 5.1e-222 774.6 549 70.7
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 8.7e-222 773.9 549 68.7
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.5e-221 773.1 549 71.0
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 2.5e-221 772.3 549 70.7
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 9.6e-221 770.4 549 69.9
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 4.8e-220 768.1 549 70.1
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 8.1e-220 767.3 549 69.9
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.1e-219 766.9 549 70.1
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.1e-219 766.9 546 69.8
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 1.1e-219 766.9 549 69.4
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.1e-219 766.9 551 69.0
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 2.4e-219 765.8 546 69.4
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.1e-219 765.4 546 69.6
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 3.1e-219 765.4 549 69.9
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 3.1e-219 765.4 549 69.8
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 1.2e-218 763.5 549 68.3
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 1.2e-218 763.5 549 69.9
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 7.6e-218 760.8 549 69.9
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 1.7e-217 759.6 549 69.4
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 4.9e-217 758.1 549 69.2
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 4.9e-217 758.1 549 67.9
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 8.4e-217 757.3 549 69.8
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 2.5e-216 755.7 549 67.8
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 3.2e-216 755.4 549 69.6
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 4.2e-216 755.0 549 68.7
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 5.5e-216 754.6 550 68.0
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 9.3e-216 753.8 549 68.9
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 2.1e-215 752.7 549 68.5
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 7.9e-215 750.7 549 68.1
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 7.9e-215 750.7 549 68.1
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 7.9e-215 750.7 549 67.2
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 7.9e-215 750.7 549 67.6
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.3e-214 750.0 549 67.6
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 1.3e-214 750.0 549 67.6
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 1.8e-214 749.6 549 68.5
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 1.8e-214 749.6 549 67.9
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.3e-214 749.2 549 67.8
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 6.7e-214 747.7 549 67.2
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.5e-213 746.5 549 67.4
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 1.6e-212 743.0 549 68.3
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 2.8e-212 742.3 549 68.3
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 4.8e-212 741.5 549 67.9
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.1e-211 740.3 546 67.2
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.8e-211 739.6 549 67.8
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 1.8e-211 739.6 549 66.5
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.8e-211 739.6 546 67.2
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 6.9e-211 737.6 549 67.0
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 9.0e-211 737.3 549 66.7
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 7.6e-210 734.2 549 66.7
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 7.6e-210 734.2 550 66.5
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 1.3e-209 733.4 550 66.9
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 8.4e-209 730.7 549 66.3
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.2e-208 728.4 520 69.4
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 5.5e-208 728.0 549 66.1
SGA_v2.0_scaffold94G28494 Striga asiatica HOM05D003395 ORTHO05D004087 9.3e-208 727.2 563 65.4
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 2.7e-207 725.7 509 70.5
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 3.5e-207 725.3 549 65.8
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.5e-205 719.9 549 66.3
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.9e-205 719.5 549 64.5
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.9e-205 719.5 549 64.5
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 2.5e-205 719.2 549 64.3
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 5.7e-205 718.0 549 64.1
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 1.3e-204 716.8 549 64.7
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.3e-204 716.8 549 64.8
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 2.2e-204 716.1 552 65.0
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 3.7e-204 715.3 549 65.2
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 4.8e-204 714.9 549 64.1
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 2.4e-203 712.6 552 64.3
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 2.4e-203 712.6 549 64.8
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 4.1e-203 711.8 547 65.4
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 9.0e-203 710.7 547 65.1
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 9.0e-203 710.7 547 65.1
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.2e-202 710.3 552 64.1
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 1.2e-202 710.3 552 64.3
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-202 710.3 546 66.1
Gohir.A11G309900 Gossypium hirsutum HOM05D003395 ORTHO05D004087 3.4e-202 708.8 523 68.3
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 4.5e-202 708.4 547 64.7
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 4.5e-202 708.4 547 64.7
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 4.5e-202 708.4 547 64.7
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 1.3e-201 706.8 550 65.5
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 5.0e-201 704.9 552 64.3
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 2.0e-197 693.0 547 63.4
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.4e-195 686.8 547 64.4
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 1.1e-192 677.2 469 70.8
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 1.4e-192 676.8 549 63.4
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 9.4e-192 674.1 506 66.8
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 1.2e-178 630.6 554 59.0
AagrBONN_evm.TU.Sc2ySwM_117.1001 Anthoceros agrestis HOM05D003395 ORTHO05D004087 4.5e-178 628.6 549 59.0
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 6.1e-175 618.2 549 59.2
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 5.0e-169 598.6 546 57.1
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 1.9e-168 596.7 547 56.1
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 2.3e-166 589.7 648 50.2
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 2.3e-166 589.7 475 64.0
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 2.0e-162 576.6 509 59.3
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 2.4e-139 500.0 361 67.6
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 3.2e-139 499.6 362 68.8
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 3.7e-132 476.1 624 44.7
FvH4_6g38800 Fragaria vesca HOM05D003395 ORTHO05D004087 7.9e-106 388.7 411 50.1
CARHR167540 Cardamine hirsuta HOM05D003395 ORTHO05D004087 9.6e-104 381.7 276 67.8
RcHm_v2.0_Chr2g0152371 Rosa chinensis HOM05D003395 ORTHO05D004087 1.6e-82 311.2 293 54.6
Haze_07832 Corylus avellana HOM05D003395 ORTHO05D004087 9.7e-80 302.0 219 67.6
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 5.5e-75 286.2 205 68.8
Eucgr.K02008 Eucalyptus grandis HOM05D003395 ORTHO05D004087 7.4e-64 249.2 157 77.1
SEGI_38355 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 3.1e-62 243.8 218 56.4
Lsat_1_v5_gn_4_163840 Lactuca sativa HOM05D003395 ORTHO05D004087 7.7e-61 239.2 206 57.3
Oeu023127.1 Olea europaea HOM05D003395 ORTHO05D004087 1.8e-54 218.0 223 53.8
PGSC0003DMG402030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 5.4e-54 216.5 166 66.3
Lsat_1_v5_gn_4_147041 Lactuca sativa HOM05D003395 ORTHO05D004087 7.7e-53 212.6 152 65.8
Actinidia17665 Actinidia chinensis HOM05D003395 ORTHO05D004087 2.3e-49 201.1 144 70.1
CAN.G4526.1 Capsicum annuum HOM05D003395 ORTHO05D004087 1.2e-48 198.7 172 58.1
PGSC0003DMG401030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 3.4e-48 197.2 124 75.8
RcHm_v2.0_Chr2g0152381 Rosa chinensis HOM05D003395 ORTHO05D004087 3.8e-44 183.7 248 44.4
CARHR167550 Cardamine hirsuta HOM05D003395 ORTHO05D004087 3.4e-40 170.6 169 54.4
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 3.5e-37 160.6 109 71.6
Cre17.g717800 Chlamydomonas reinhardtii HOM05D003395 ORTHO05D004087 6.2e-34 149.8 579 24.5
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 6.8e-33 146.4 177 46.3
FAN09G3727 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.9e-31 140.2 221 38.0
Lsat_1_v5_gn_1_62780 Lactuca sativa HOM05D003395 ORTHO05D004087 8.3e-31 139.4 191 43.5
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 4.1e-30 137.1 103 66.0
PRCOL_00003855 Prasinoderma coloniale HOM05D003395 ORTHO05D004087 2.5e-27 127.9 596 24.8
SHI32633 Sapria himalayana HOM05D003395 ORTHO05D004087 9.5e-27 125.9 99 65.7
SHI10457 Sapria himalayana HOM05D003395 ORTHO05D004087 8.3e-23 112.8 129 48.8
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 7.3e-19 99.8 94 48.9
MD00G1107400 Malus domestica HOM05D003395 ORTHO05D004087 1.2e-18 99.0 100 51.0
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 2.6e-16 91.3 76 55.3
Actinidia17662 Actinidia chinensis HOM05D003395 ORTHO05D004087 2.2e-15 88.2 48 79.2
AagrBONN_evm.TU.Sc2ySwM_117.981 Anthoceros agrestis HOM05D003395 ORTHO05D004087 3.2e-14 84.3 100 50.0
SHI17502 Sapria himalayana HOM05D003395 ORTHO05D004087 9.2e-14 82.8 68 55.9
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.2e-13 82.4 60 66.7
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-12 78.6 117 41.0
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 1.5e-11 75.5 70 55.7
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-11 75.1 65 55.4
Eucgr.E01623 Eucalyptus grandis HOM05D003395 ORTHO05D004087 4.3e-11 73.9 58 60.3
CARHR254100 Cardamine hirsuta HOM05D003395 ORTHO05D004087 2.1e-10 71.6 49 67.3
SHI40122 Sapria himalayana HOM05D003395 ORTHO05D004087 3.6e-10 70.9 131 33.6
SHI48926 Sapria himalayana HOM05D003395 ORTHO05D004087 8.1e-10 69.7 59 55.9
SHI17504 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-09 69.3 85 47.1
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 1.4e-09 68.9 94 42.6
Gohir.A03G107600 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.3e-07 62.4 69 49.3
SHI34458 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-07 61.6 62 53.2
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 3.2e-06 57.8 62 46.8


User provided reference genes

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