Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 4.1e-113 411.4 206 100.0
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 4.5e-67 258.5 184 71.7
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 1.4e-65 253.4 184 67.4
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 3.2e-65 252.3 184 66.8
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 9.4e-65 250.8 184 67.4
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.6e-64 250.0 184 66.8
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 1.6e-64 250.0 184 65.8
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 1.0e-63 247.3 184 67.4
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.3e-63 246.1 187 66.3
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 3.0e-63 245.7 184 66.3
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 3.9e-63 245.4 184 69.0
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 3.9e-63 245.4 184 66.3
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 5.1e-63 245.0 184 66.8
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 6.7e-63 244.6 184 66.8
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 8.8e-63 244.2 184 65.8
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 3.3e-62 242.3 184 66.3
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 4.4e-62 241.9 183 66.7
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 4.4e-62 241.9 184 65.2
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 9.7e-62 240.7 184 65.8
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.3e-61 240.4 184 68.5
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 1.3e-61 240.4 184 66.3
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 2.2e-61 239.6 184 64.7
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 2.2e-61 239.6 184 65.8
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 2.2e-61 239.6 184 65.2
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 2.8e-61 239.2 184 64.1
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 2.8e-61 239.2 184 66.8
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 3.7e-61 238.8 184 68.5
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 3.7e-61 238.8 184 66.3
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 6.3e-61 238.0 184 66.8
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 8.2e-61 237.7 184 64.7
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 1.1e-60 237.3 184 66.3
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 1.4e-60 236.9 184 64.7
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.4e-60 236.9 184 65.2
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.4e-60 236.9 184 64.7
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 1.4e-60 236.9 184 64.7
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 1.4e-60 236.9 184 65.2
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 1.8e-60 236.5 184 63.6
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 1.8e-60 236.5 184 64.7
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 2.4e-60 236.1 184 64.7
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 2.4e-60 236.1 184 65.8
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 2.4e-60 236.1 184 65.8
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 4.1e-60 235.3 184 66.3
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 5.3e-60 235.0 184 64.1
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 6.9e-60 234.6 184 65.2
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 6.9e-60 234.6 184 64.1
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 9.1e-60 234.2 184 62.0
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 1.2e-59 233.8 184 63.0
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 1.5e-59 233.4 184 63.6
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 1.5e-59 233.4 184 63.6
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 2.6e-59 232.6 184 62.5
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 2.6e-59 232.6 184 62.5
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 3.4e-59 232.3 184 62.5
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 4.5e-59 231.9 184 64.1
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.0e-58 230.7 184 64.7
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 1.3e-58 230.3 184 63.0
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 2.2e-58 229.6 184 62.5
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 2.2e-58 229.6 184 63.6
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.2e-58 229.6 184 62.5
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.9e-58 229.2 184 62.5
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 3.8e-58 228.8 184 63.0
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 3.8e-58 228.8 172 66.9
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 3.8e-58 228.8 184 63.0
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 5.0e-58 228.4 192 63.0
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 6.5e-58 228.0 184 62.5
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 1.1e-57 227.3 184 62.5
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 1.9e-57 226.5 184 62.0
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 1.9e-57 226.5 184 64.1
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 2.5e-57 226.1 179 64.2
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 2.5e-57 226.1 184 64.1
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 3.2e-57 225.7 184 60.9
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 4.2e-57 225.3 184 61.4
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.2e-57 225.3 174 65.5
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 5.5e-57 224.9 184 61.4
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 5.5e-57 224.9 184 61.4
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 9.4e-57 224.2 184 62.0
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 9.4e-57 224.2 184 62.0
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 2.1e-56 223.0 184 62.5
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 2.7e-56 222.6 184 59.2
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 3.6e-56 222.2 184 62.0
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 4.7e-56 221.9 184 60.9
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 6.1e-56 221.5 184 61.4
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 7.9e-56 221.1 184 60.9
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 7.9e-56 221.1 184 60.9
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 1.4e-55 220.3 184 60.3
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 6.7e-55 218.0 184 60.3
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 8.8e-55 217.6 184 58.7
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 1.5e-54 216.9 182 61.5
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.5e-54 216.9 210 56.7
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 2.0e-54 216.5 162 69.1
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 2.6e-54 216.1 184 59.8
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 3.3e-54 215.7 210 56.7
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 9.7e-54 214.2 182 58.2
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 9.7e-54 214.2 185 58.9
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.3e-53 213.8 184 59.2
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 2.2e-53 213.0 184 59.2
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 2.8e-53 212.6 184 59.2
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 2.8e-53 212.6 184 59.2
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 2.8e-53 212.6 184 59.2
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 2.8e-53 212.6 183 59.6
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 6.3e-53 211.5 184 59.8
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 6.3e-53 211.5 184 59.8
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.1e-52 210.7 184 58.2
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 1.8e-52 209.9 210 54.3
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 3.1e-52 209.1 165 65.5
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 2.0e-51 206.5 159 65.4
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 2.0e-51 206.5 159 65.4
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 4.5e-51 205.3 185 57.8
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 2.9e-50 202.6 165 63.0
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 1.5e-49 200.3 186 56.5
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.5e-49 199.5 158 65.2
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 7.2e-49 198.0 159 62.9
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.8e-47 193.4 162 63.0
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.8e-47 193.4 158 64.6
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 2.3e-47 193.0 159 62.9
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 8.2e-45 184.5 187 52.9
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 5.0e-42 175.3 184 49.5
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.1e-41 174.1 124 67.7
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 2.5e-41 172.9 184 51.1
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 4.2e-41 172.2 142 61.3
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 4.1e-36 155.6 129 62.8
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 2.0e-35 153.3 176 46.6
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 2.9e-34 149.4 139 59.7
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 1.2e-30 137.5 184 43.5
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 9.8e-30 134.4 185 39.5
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.4e-28 130.6 110 62.7
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 3.8e-26 122.5 187 42.8
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 6.6e-26 121.7 187 39.6
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-21 107.1 153 43.8
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-21 107.1 107 49.5
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 6.4e-21 105.1 129 48.1
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 2.4e-20 103.2 107 48.6
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 7.8e-19 98.2 142 38.7
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 1.0e-18 97.8 130 43.1
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 2.3e-18 96.7 101 47.5
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 7.3e-17 91.7 108 47.2
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 1.2e-16 90.9 155 38.7
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 3.4e-14 82.8 82 53.7
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-09 67.8 98 42.9
Actinidia17665 Actinidia chinensis HOM05D003395 ORTHO05D004087 6.8e-07 58.5 117 36.8


User provided reference genes

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