Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1072 Ceratophyllum demersum HOM05D000268 ORTHO05D043896 4.6e-85 317.8 152 100.0
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 4.7e-29 131.7 145 44.1
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 6.8e-28 127.9 146 43.8
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 8.8e-28 127.5 146 43.2
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 1.2e-27 127.1 145 42.1
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 1.5e-27 126.7 125 47.2
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 1.5e-27 126.7 119 49.6
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 2.6e-27 125.9 119 48.7
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 3.4e-27 125.6 147 43.5
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 5.7e-27 124.8 144 43.1
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 9.8e-27 124.0 121 52.9
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.3e-26 123.6 143 44.8
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 2.2e-26 122.9 152 42.8
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 2.2e-26 122.9 118 50.8
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 2.2e-26 122.9 122 48.4
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 2.2e-26 122.9 124 47.6
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 2.8e-26 122.5 125 45.6
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 2.8e-26 122.5 153 43.8
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 4.8e-26 121.7 121 51.2
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 4.8e-26 121.7 120 47.5
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 6.3e-26 121.3 122 50.0
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 8.3e-26 120.9 119 47.9
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 8.3e-26 120.9 146 41.8
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 8.3e-26 120.9 122 48.4
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.4e-25 120.2 120 47.5
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.4e-25 120.2 143 40.6
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.8e-25 119.8 118 48.3
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.8e-25 119.8 146 41.8
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 1.8e-25 119.8 125 44.8
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 3.1e-25 119.0 133 46.6
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 3.1e-25 119.0 120 49.2
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 4.1e-25 118.6 118 49.2
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 4.1e-25 118.6 146 41.1
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 4.1e-25 118.6 119 44.5
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 4.1e-25 118.6 121 49.6
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 5.4e-25 118.2 143 40.6
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 7.0e-25 117.9 121 48.8
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.2e-24 117.1 121 46.3
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 1.6e-24 116.7 119 43.7
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 2.0e-24 116.3 141 40.4
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 2.7e-24 115.9 140 40.7
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 2.7e-24 115.9 121 49.6
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 2.7e-24 115.9 125 43.2
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 4.5e-24 115.2 118 44.9
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 5.9e-24 114.8 125 44.8
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 5.9e-24 114.8 125 44.8
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 5.9e-24 114.8 125 44.8
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 5.9e-24 114.8 119 43.7
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 7.7e-24 114.4 119 43.7
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 7.7e-24 114.4 123 45.5
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 1.0e-23 114.0 151 41.7
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.7e-23 113.2 125 44.8
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 2.9e-23 112.5 118 44.9
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 3.8e-23 112.1 161 39.8
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 5.0e-23 111.7 125 40.8
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 6.5e-23 111.3 140 42.1
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 8.5e-23 110.9 123 43.9
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 1.9e-22 109.8 124 41.9
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 2.5e-22 109.4 154 38.3
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 5.5e-22 108.2 138 40.6
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 7.2e-22 107.8 119 42.0
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 1.2e-21 107.1 138 40.6
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 1.2e-21 107.1 132 42.4
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 1.2e-21 107.1 132 42.4
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 1.2e-21 107.1 132 42.4
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 1.2e-21 107.1 124 43.5
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 1.2e-21 107.1 120 42.5
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 1.6e-21 106.7 122 42.6
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 1.6e-21 106.7 124 41.9
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 2.8e-21 105.9 127 43.3
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 2.8e-21 105.9 122 42.6
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 2.8e-21 105.9 117 43.6
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 3.6e-21 105.5 137 40.9
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 3.6e-21 105.5 138 41.3
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 4.7e-21 105.1 147 39.5
Lj3g0021520 Lotus japonicus HOM05D000268 ORTHO05D004469 4.7e-21 105.1 121 44.6
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 4.7e-21 105.1 128 39.8
Atru.chr3.486 Acer truncatum HOM05D000268 ORTHO05D004469 6.1e-21 104.8 83 51.8
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 6.1e-21 104.8 119 44.5
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 6.1e-21 104.8 121 39.7
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 8.0e-21 104.4 152 39.5
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 8.0e-21 104.4 121 44.6
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 8.0e-21 104.4 121 44.6
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.0e-20 104.0 139 40.3
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.4e-20 103.6 119 43.7
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.4e-20 103.6 126 41.3
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 1.4e-20 103.6 119 43.7
Lj4g0026497 Lotus japonicus HOM05D000268 ORTHO05D004469 1.8e-20 103.2 118 42.4
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.3e-20 102.8 126 44.4
TPR.G31559 Trifolium pratense HOM05D000268 ORTHO05D004469 2.3e-20 102.8 120 42.5
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 3.0e-20 102.4 147 38.1
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 3.0e-20 102.4 119 42.0
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 5.2e-20 101.7 119 42.0
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 6.8e-20 101.3 122 41.0
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 6.8e-20 101.3 125 42.4
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 6.8e-20 101.3 127 39.4
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 6.8e-20 101.3 120 43.3
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 8.8e-20 100.9 116 41.4
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 1.2e-19 100.5 122 41.0
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 1.5e-19 100.1 126 41.3
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 1.5e-19 100.1 119 40.3
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 2.0e-19 99.8 128 39.8
HPP92_007810 Vanilla planifolia HOM05D000268 ORTHO05D004469 2.6e-19 99.4 116 40.5
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 7.5e-19 97.8 151 35.1
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 3.7e-18 95.5 120 41.7
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 4.9e-18 95.1 121 38.0
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 4.9e-18 95.1 117 38.5
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 8.3e-18 94.4 119 38.7
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 3.1e-17 92.4 127 40.9
Medtr4g132610 Medicago truncatula HOM05D000268 ORTHO05D004469 9.2e-17 90.9 122 41.0
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 2.0e-16 89.7 139 35.3
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 1.3e-15 87.0 118 38.1
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 2.3e-15 86.3 118 37.3
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.9e-15 85.9 121 39.7
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 6.6e-15 84.7 127 38.6
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 1.6e-13 80.1 88 43.2
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 3.6e-13 79.0 118 36.4
SEGI_11374 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 1.4e-12 77.0 125 31.2
Psat4g090200 Pisum sativum HOM05D000268 ORTHO05D004469 5.2e-12 75.1 115 35.7
Lj4g0005897 Lotus japonicus HOM05D000268 ORTHO05D004469 6.8e-12 74.7 61 50.8
SEGI_04650 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 6.4e-10 68.2 98 37.8
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 4.1e-09 65.5 109 37.6
SHI08704 Sapria himalayana HOM05D000268 ORTHO05D004469 3.9e-07 58.9 92 35.9
Lsat_1_v5_gn_8_77121 Lactuca sativa HOM05D000268 ORTHO05D043896 5.6e-06 55.1 70 35.7


User provided reference genes

Program Settings