Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 5.7e-68 260.8 129 100.0
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.7e-59 232.6 126 89.7
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 4.7e-38 161.4 126 58.7
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.1e-38 161.0 126 58.7
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.8e-37 159.5 127 58.3
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.8e-37 157.5 126 56.3
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 1.2e-36 156.8 130 59.2
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 2.0e-36 156.0 83 80.7
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 2.0e-36 156.0 127 59.1
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.6e-36 155.6 89 75.3
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 5.7e-36 154.5 127 57.5
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 7.5e-36 154.1 83 81.9
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 7.5e-36 154.1 132 56.1
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.3e-35 153.3 104 70.2
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 2.2e-35 152.5 130 57.7
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 2.2e-35 152.5 130 57.7
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.8e-35 152.1 94 73.4
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 2.8e-35 152.1 93 73.1
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 3.7e-35 151.8 83 78.3
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 3.7e-35 151.8 83 80.7
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 6.3e-35 151.0 89 75.3
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.1e-34 150.2 83 79.5
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 1.8e-34 149.4 95 70.5
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 2.4e-34 149.1 86 75.6
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 2.4e-34 149.1 127 59.1
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 5.4e-34 147.9 115 61.7
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 9.1e-34 147.1 126 58.7
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 9.1e-34 147.1 112 60.7
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 9.1e-34 147.1 99 65.7
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 9.1e-34 147.1 109 65.1
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 1.6e-33 146.4 113 62.8
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 1.6e-33 146.4 126 54.8
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 2.0e-33 146.0 126 57.9
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 2.0e-33 146.0 111 61.3
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 2.7e-33 145.6 94 70.2
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 4.5e-33 144.8 94 70.2
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 7.7e-33 144.1 89 71.9
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 7.7e-33 144.1 126 53.2
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 7.7e-33 144.1 108 63.9
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 1.7e-32 142.9 89 70.8
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 2.3e-32 142.5 95 68.4
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 2.9e-32 142.1 82 74.4
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 2.9e-32 142.1 126 54.8
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 3.8e-32 141.7 99 64.6
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 5.0e-32 141.4 89 69.7
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 6.5e-32 141.0 130 54.6
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 1.1e-31 140.2 89 69.7
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.1e-31 140.2 81 75.3
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 1.1e-31 140.2 81 75.3
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 1.1e-31 140.2 81 75.3
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 1.1e-31 140.2 81 75.3
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 1.1e-31 140.2 129 55.0
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.5e-31 139.0 131 54.2
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 3.2e-31 138.7 126 54.0
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 7.2e-31 137.5 95 66.3
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 7.2e-31 137.5 95 67.4
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.2e-30 136.7 113 60.2
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 1.6e-30 136.3 108 59.3
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.6e-30 136.3 99 65.7
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.6e-30 136.3 99 65.7
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.1e-30 136.0 95 65.3
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 3.6e-30 135.2 96 62.5
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 4.7e-30 134.8 126 53.2
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 1.4e-29 133.3 92 67.4
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-29 133.3 127 50.4
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.3e-29 132.5 95 65.3
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 2.3e-29 132.5 101 59.4
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 6.8e-29 131.0 125 48.0
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 1.5e-28 129.8 69 85.5
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 2.6e-28 129.0 122 51.6
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 3.4e-28 128.6 124 50.0
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 4.4e-28 128.3 91 64.8
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 5.7e-28 127.9 99 58.6
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 9.8e-28 127.1 123 49.6
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 9.8e-28 127.1 91 64.8
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 1.3e-27 126.7 105 58.1
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 1.7e-27 126.3 96 58.3
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 1.1e-26 123.6 90 64.4
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 1.1e-26 123.6 84 65.5
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.8e-26 122.9 91 64.8
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.8e-26 122.9 84 65.5
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 2.4e-26 122.5 83 65.1
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 2.4e-26 122.5 97 59.8
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 3.1e-26 122.1 137 43.1
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 3.1e-26 122.1 101 59.4
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 4.1e-26 121.7 91 61.5
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 7.0e-26 120.9 90 64.4
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 7.0e-26 120.9 97 58.8
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.0e-26 120.9 102 58.8
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 7.0e-26 120.9 130 49.2
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 9.2e-26 120.6 82 64.6
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 9.2e-26 120.6 122 47.5
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 2.0e-25 119.4 83 62.7
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.0e-25 119.4 100 57.0
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 3.5e-25 118.6 82 64.6
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 4.5e-25 118.2 89 59.6
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 5.9e-25 117.9 83 63.9
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 7.8e-25 117.5 82 62.2
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 7.8e-25 117.5 102 55.9
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 1.0e-24 117.1 81 63.0
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.0e-24 117.1 113 53.1
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 1.3e-24 116.7 102 54.9
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.7e-24 116.3 111 51.4
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 2.3e-24 115.9 81 61.7
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 2.9e-24 115.5 112 48.2
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 6.6e-24 114.4 69 75.4
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 9.5e-23 110.5 69 72.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 1.6e-22 109.8 124 48.4
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 1.0e-21 107.1 120 45.0
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.8e-21 106.3 69 66.7
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.2e-20 103.6 83 56.6
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 7.5e-20 100.9 99 48.5
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 7.5e-20 100.9 81 55.6
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 9.8e-20 100.5 93 51.6
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 6.4e-19 97.8 94 52.1
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 6.4e-19 97.8 94 52.1
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 6.4e-19 97.8 94 52.1
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.8e-18 96.3 94 52.1
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 7.0e-18 94.4 94 51.1
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 1.0e-16 90.5 79 55.7
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.4e-13 80.1 99 46.5
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 3.1e-13 79.0 87 47.1
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 6.8e-13 77.8 45 77.8
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 7.5e-12 74.3 104 40.4
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 2.2e-11 72.8 82 43.9
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 6.4e-11 71.2 68 51.5
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.1e-10 70.5 37 81.1
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 2.4e-10 69.3 42 69.0
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 8.6e-08 60.8 45 57.8
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 4.3e-07 58.5 44 59.1


User provided reference genes

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