Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.1e-156 555.1 273 100.0
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 1.3e-125 453.4 274 78.8
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 1.3e-125 453.4 274 78.8
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.8e-124 449.5 269 79.2
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 6.9e-124 447.6 269 78.4
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 2.2e-122 442.6 270 76.7
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 3.8e-122 441.8 264 78.8
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 6.5e-122 441.0 264 78.0
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 8.5e-122 440.7 272 74.3
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 2.5e-121 439.1 274 76.3
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 3.2e-121 438.7 264 77.3
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 7.2e-121 437.6 264 76.9
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 1.6e-120 436.4 264 77.3
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 1.6e-120 436.4 268 76.5
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 2.1e-120 436.0 265 76.2
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 2.7e-120 435.6 265 76.2
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 3.6e-120 435.3 264 76.5
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 4.6e-120 434.9 264 77.3
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 4.6e-120 434.9 264 76.9
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 6.1e-120 434.5 265 75.8
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 7.9e-120 434.1 264 76.5
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 7.9e-120 434.1 266 75.9
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 1.0e-119 433.7 264 76.9
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 1.4e-119 433.3 263 77.6
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 1.8e-119 433.0 280 75.0
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 1.8e-119 433.0 263 77.2
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 3.9e-119 431.8 265 76.2
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 6.7e-119 431.0 265 75.5
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 8.8e-119 430.6 269 75.5
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 1.5e-118 429.9 265 76.6
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 1.5e-118 429.9 265 76.6
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.5e-118 429.9 266 75.2
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 1.5e-118 429.9 282 73.8
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 2.0e-118 429.5 264 75.8
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 2.0e-118 429.5 270 75.2
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 2.0e-118 429.5 278 74.1
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.5e-118 429.1 272 75.0
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 2.5e-118 429.1 265 75.8
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 3.3e-118 428.7 274 75.5
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 5.7e-118 427.9 266 75.6
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 7.4e-118 427.6 264 75.8
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 7.4e-118 427.6 267 75.7
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 7.4e-118 427.6 272 75.0
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 7.4e-118 427.6 265 76.2
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 9.7e-118 427.2 263 77.2
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 1.7e-117 426.4 266 75.2
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 2.8e-117 425.6 273 74.7
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 3.7e-117 425.2 278 74.1
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 3.7e-117 425.2 267 75.7
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 4.8e-117 424.9 270 75.2
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 6.3e-117 424.5 264 74.2
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 8.2e-117 424.1 247 86.6
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.1e-116 423.7 270 75.2
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.4e-116 423.3 267 74.5
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.8e-116 422.9 270 73.7
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 2.4e-116 422.5 271 73.1
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 3.1e-116 422.2 264 75.4
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 4.1e-116 421.8 264 76.5
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.5e-115 419.9 278 73.0
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 2.6e-115 419.1 270 72.6
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 3.4e-115 418.7 269 74.7
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 5.9e-115 417.9 274 71.5
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 5.9e-115 417.9 266 74.1
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 5.9e-115 417.9 291 69.4
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 1.0e-114 417.2 280 72.5
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 3.8e-114 415.2 276 75.4
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 5.0e-114 414.8 296 68.2
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 5.0e-114 414.8 282 72.0
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 6.5e-114 414.5 292 68.8
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 8.5e-114 414.1 269 73.6
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 8.5e-114 414.1 264 73.5
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 1.4e-113 413.3 264 73.5
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 2.5e-113 412.5 268 73.9
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 2.5e-113 412.5 282 71.6
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 3.2e-113 412.1 248 78.2
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 5.5e-113 411.4 264 72.7
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 7.2e-113 411.0 264 72.3
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 7.2e-113 411.0 264 72.3
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 9.4e-113 410.6 317 65.3
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 9.4e-113 410.6 264 73.1
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 1.2e-112 410.2 270 73.3
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.6e-112 409.8 269 72.5
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 2.1e-112 409.5 289 68.2
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 6.1e-112 407.9 266 72.2
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 7.9e-112 407.5 265 72.1
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 7.9e-112 407.5 274 71.2
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 1.4e-111 406.8 303 67.0
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 2.3e-111 406.0 265 71.7
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 2.3e-111 406.0 265 71.7
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 3.9e-111 405.2 264 72.7
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 6.7e-111 404.4 269 71.0
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 8.8e-111 404.1 264 72.3
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 1.5e-110 403.3 275 72.0
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 3.3e-110 402.1 264 71.6
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 3.3e-110 402.1 267 70.8
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 9.7e-110 400.6 273 71.4
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.7e-109 399.8 287 69.0
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 4.8e-109 398.3 300 65.7
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 1.4e-108 396.7 283 69.6
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.1e-108 395.2 264 72.0
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.1e-108 395.2 264 72.0
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 4.1e-108 395.2 301 66.1
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 5.3e-108 394.8 293 66.9
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 2.9e-106 389.0 304 63.8
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 1.9e-105 386.3 269 69.5
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 3.2e-105 385.6 287 66.6
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.7e-104 382.5 255 71.8
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 3.6e-104 382.1 272 70.6
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 1.3e-98 363.6 222 76.6
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 6.5e-98 361.3 194 90.7
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 1.4e-95 353.6 233 70.4
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 1.2e-94 350.5 224 72.3
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 5.7e-94 348.2 255 67.5
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 9.1e-92 340.9 266 64.7
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 8.5e-90 334.3 246 69.1
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 1.5e-89 333.6 278 61.9
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 3.0e-87 325.9 266 62.0
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 3.0e-87 325.9 266 62.0
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 4.0e-87 325.5 280 58.9
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 8.8e-87 324.3 280 58.9
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 2.6e-86 322.8 267 61.8
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 5.7e-86 321.6 273 59.3
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 9.1e-84 314.3 277 58.5
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 1.1e-81 307.4 191 75.9
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 3.3e-81 305.8 211 69.2
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.2e-78 297.4 196 71.9
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 8.6e-74 281.2 259 56.0
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 8.3e-69 264.6 181 69.6
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 7.0e-68 261.5 172 72.7
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 1.2e-64 250.8 172 68.6
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 3.6e-56 222.6 181 64.1
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 1.2e-54 217.6 237 51.9
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 1.6e-48 197.2 109 82.6
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.8e-47 193.7 138 66.7
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 7.6e-46 188.3 108 82.4
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 8.4e-45 184.9 104 81.7
CAN.G678.10 Capsicum annuum HOM05D004147 ORTHO05D005606 2.5e-41 173.3 109 76.1
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 1.3e-40 171.0 101 77.2
Potri.013G061100 Populus trichocarpa HOM05D004147 ORTHO05D005606 9.0e-39 164.9 263 37.3
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 4.9e-37 159.1 107 70.1
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 3.2e-36 156.4 122 64.8
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 5.1e-34 149.1 78 85.9
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 4.3e-33 146.0 86 81.4
PRCOL_00001079 Prasinoderma coloniale HOM05D004147 ORTHO05D005606 7.3e-33 145.2 257 35.0
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 3.8e-29 132.9 86 70.9
Lsat_1_v5_gn_4_94280 Lactuca sativa HOM05D004147 ORTHO05D005606 6.4e-29 132.1 245 36.7
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 4.2e-28 129.4 83 69.9
Cre06.g278208 Chlamydomonas reinhardtii HOM05D004147 ORTHO05D005606 5.4e-28 129.0 251 33.5
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 6.7e-26 122.1 177 41.8
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 1.9e-25 120.6 177 41.8
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 2.5e-25 120.2 66 81.8
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 5.6e-25 119.0 118 55.9
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 5.6e-25 119.0 118 55.9
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 7.4e-25 118.6 171 42.1
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 3.7e-24 116.3 105 60.0
TWI32G1322 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.4e-23 114.4 260 30.4
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 2.4e-23 113.6 109 56.9
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 2.6e-22 110.2 109 56.0
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 1.7e-21 107.5 118 51.7
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 8.4e-21 105.1 155 39.4
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 7.1e-20 102.1 155 39.4
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 1.3e-18 97.8 155 38.1
TAR623G1050 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.1e-17 94.7 50 88.0
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 4.3e-17 92.8 145 39.3
Lsat_1_v5_gn_8_97821 Lactuca sativa HOM05D004147 ORTHO05D005606 4.5e-14 82.8 49 77.6
HanXRQChr10g0307541 Helianthus annuus HOM05D004147 ORTHO05D005606 6.5e-13 79.0 46 71.7


User provided reference genes

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