Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 8.4e-171 603.6 304 100.0
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 4.1e-93 345.5 260 68.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 7.0e-93 344.7 258 66.3
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 7.8e-92 341.3 268 64.2
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.1e-90 337.4 258 64.7
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.2e-89 334.0 260 65.8
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.8e-89 332.8 294 57.8
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 3.6e-89 332.4 258 64.0
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 8.0e-89 331.3 258 64.0
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.1e-88 330.9 258 64.0
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.1e-88 329.3 258 63.6
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 3.1e-88 329.3 258 62.8
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 4.0e-88 328.9 260 62.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 8.9e-88 327.8 265 62.3
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.2e-87 327.4 258 63.6
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.2e-87 327.4 258 63.6
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.2e-87 327.4 262 64.5
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.0e-87 326.6 269 61.7
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 3.4e-87 325.9 272 61.4
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 3.4e-87 325.9 258 61.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 4.4e-87 325.5 259 63.3
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 5.8e-87 325.1 259 64.5
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.3e-86 323.9 258 64.0
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.7e-86 323.6 294 57.1
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 4.9e-86 322.0 258 62.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 6.4e-86 321.6 258 63.2
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 6.4e-86 321.6 258 62.0
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 8.3e-86 321.2 269 58.7
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.1e-85 320.9 258 62.8
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 1.1e-85 320.9 293 57.0
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 1.4e-85 320.5 258 60.9
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.9e-85 320.1 261 62.5
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.9e-85 320.1 240 67.1
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.9e-85 320.1 269 57.2
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.9e-85 320.1 269 57.2
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.9e-85 320.1 269 57.6
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.4e-85 319.7 293 56.7
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 2.4e-85 319.7 269 61.0
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.2e-85 319.3 258 60.9
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 4.1e-85 318.9 293 56.3
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 5.4e-85 318.5 268 57.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 7.1e-85 318.2 269 59.5
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 7.1e-85 318.2 258 62.0
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.2e-85 317.8 258 60.5
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 9.2e-85 317.8 258 60.9
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.2e-84 317.4 258 60.1
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.2e-84 317.4 256 60.5
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 1.2e-84 317.4 258 61.2
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.6e-84 317.0 258 62.4
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.6e-84 317.0 258 62.8
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 1.6e-84 317.0 258 60.9
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.1e-84 316.6 261 60.5
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.7e-84 316.2 258 61.6
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.7e-84 316.2 258 60.5
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 3.5e-84 315.8 259 61.8
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 3.5e-84 315.8 294 55.8
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 3.5e-84 315.8 258 60.1
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 3.5e-84 315.8 262 61.5
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 4.6e-84 315.5 269 58.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 4.6e-84 315.5 258 59.3
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 6.0e-84 315.1 258 60.9
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 7.8e-84 314.7 296 55.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 7.8e-84 314.7 258 60.5
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 7.8e-84 314.7 261 60.2
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.0e-83 314.3 263 61.2
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.0e-83 314.3 263 61.2
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.7e-83 313.5 257 61.5
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 5.1e-83 312.0 258 58.9
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 6.6e-83 311.6 269 56.9
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 6.6e-83 311.6 258 60.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 8.6e-83 311.2 259 60.2
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 8.6e-83 311.2 265 58.5
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.1e-82 310.8 263 57.4
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.1e-82 310.8 265 58.1
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.5e-82 310.5 258 60.9
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 2.5e-82 309.7 260 58.8
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.3e-82 309.3 263 60.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 4.3e-82 308.9 258 61.6
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.1e-81 306.6 257 59.9
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 3.6e-81 305.8 258 60.9
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.7e-81 305.4 258 61.2
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.5e-79 300.4 268 58.2
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.0e-79 300.1 275 56.4
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.4e-79 298.9 271 56.1
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 5.8e-79 298.5 271 53.9
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 9.9e-79 297.7 163 96.3
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.9e-78 296.2 305 52.5
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 3.7e-78 295.8 260 57.3
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.9e-77 293.5 260 56.2
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.9e-77 293.5 293 52.6
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 9.2e-77 291.2 270 55.9
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 6.0e-76 288.5 259 59.1
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 7.8e-76 288.1 232 62.1
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.0e-75 287.7 231 63.6
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.7e-75 287.0 247 58.7
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 8.6e-75 284.6 306 52.0
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.1e-72 277.7 244 58.6
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.0e-71 273.5 272 52.6
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 5.8e-71 271.9 359 42.9
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.9e-66 256.9 207 61.4
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 4.3e-66 255.8 257 54.1
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 9.0e-64 248.1 242 52.5
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 9.0e-64 248.1 242 52.5
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 4.9e-62 242.3 234 53.8
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 4.0e-56 222.6 242 50.4
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 3.4e-55 219.5 270 45.6
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.8e-54 216.1 279 42.7
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.4e-48 197.6 279 43.0
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.6e-47 193.4 124 74.2
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 4.2e-45 186.0 249 42.6
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 2.7e-44 183.3 160 59.4
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 2.7e-44 183.3 160 59.4
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 2.7e-44 183.3 129 69.0
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 3.9e-35 152.9 292 37.3
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.7e-30 137.5 240 37.5
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 1.2e-28 131.3 145 49.0
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.1e-24 118.2 128 53.1
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.8e-24 117.5 115 51.3
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 8.8e-19 98.6 178 36.0
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 8.8e-19 98.6 86 58.1
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 6.3e-17 92.4 83 53.0
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.1e-16 88.6 128 41.4
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.0e-11 75.1 67 55.2
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 9.7e-10 68.6 111 41.4
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.3e-09 68.2 42 78.6
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 6.3e-09 65.9 74 50.0
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.3e-09 65.9 52 65.4
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.2e-09 65.5 52 65.4


User provided reference genes

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