Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 4.4e-172 607.8 297 100.0
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 8.6e-144 513.8 298 82.2
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.2e-140 503.4 298 81.5
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 4.4e-140 501.5 298 81.2
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 5.4e-138 494.6 297 79.5
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 9.2e-138 493.8 299 80.9
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.6e-137 493.0 298 79.9
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.6e-137 493.0 298 80.5
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 2.0e-137 492.7 299 79.9
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.5e-137 491.5 294 78.6
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 5.9e-137 491.1 298 79.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.0e-136 490.3 299 80.3
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 2.3e-136 489.2 298 78.2
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.9e-136 488.8 299 79.6
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 8.6e-136 487.3 300 78.3
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.5e-135 486.5 293 79.5
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 1.9e-135 486.1 287 80.1
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 5.6e-135 484.6 309 77.7
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 9.5e-135 483.8 298 78.2
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.2e-134 483.4 294 78.6
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.2e-134 483.4 302 78.5
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 6.1e-134 481.1 298 78.2
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 3.0e-133 478.8 292 77.7
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 4.0e-133 478.4 300 77.3
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 6.8e-133 477.6 295 78.3
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.2e-132 476.9 298 76.5
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 1.5e-132 476.5 293 77.8
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.0e-132 476.1 292 78.8
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.6e-132 475.7 298 77.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 3.4e-132 475.3 293 77.5
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 3.4e-132 475.3 292 77.4
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 4.4e-132 474.9 298 77.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 7.5e-132 474.2 294 77.9
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 9.8e-132 473.8 298 77.2
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.3e-131 473.4 300 77.7
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 1.7e-131 473.0 292 78.4
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 1.7e-131 473.0 293 77.5
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 2.2e-131 472.6 296 77.4
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 8.3e-131 470.7 295 77.6
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 8.3e-131 470.7 299 76.6
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.1e-130 470.3 327 71.6
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 2.4e-130 469.2 300 76.0
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 2.4e-130 469.2 296 76.0
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 3.2e-130 468.8 298 75.8
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 9.2e-130 467.2 298 76.5
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 9.2e-130 467.2 294 76.9
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 2.0e-129 466.1 293 76.5
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 3.5e-129 465.3 299 75.6
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.5e-129 465.3 298 76.8
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 4.6e-129 464.9 298 75.8
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.6e-129 464.9 298 75.8
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 6.0e-129 464.5 293 75.8
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 6.0e-129 464.5 298 75.5
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.3e-128 463.4 298 75.5
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.3e-128 462.6 323 70.6
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 3.0e-128 462.2 297 74.4
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 5.0e-128 461.5 298 75.5
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 6.6e-128 461.1 298 75.2
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 6.6e-128 461.1 298 75.2
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.1e-127 460.3 299 75.3
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 4.3e-127 458.4 300 75.7
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 4.3e-127 458.4 298 75.5
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 7.3e-127 457.6 292 77.4
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.8e-126 455.7 301 74.4
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 8.0e-126 454.1 282 77.7
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.4e-125 453.4 299 73.9
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 1.8e-125 453.0 297 72.1
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 4.0e-125 451.8 298 73.8
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 9.8e-124 447.2 333 68.8
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 2.2e-123 446.0 291 73.5
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.1e-122 443.7 281 76.9
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.9e-122 443.0 268 81.3
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 2.4e-122 442.6 291 72.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 4.1e-122 441.8 291 72.5
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 4.1e-122 441.8 291 72.5
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 4.1e-122 441.8 291 72.5
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 4.1e-122 441.8 291 72.5
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 7.0e-122 441.0 291 73.2
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 4.6e-121 438.3 304 71.4
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.3e-120 436.0 298 73.2
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 3.0e-120 435.6 298 71.1
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.9e-120 435.3 291 72.9
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.9e-119 433.0 291 70.8
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 7.3e-119 431.0 298 70.1
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 3.6e-118 428.7 293 69.3
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 8.1e-118 427.6 239 85.4
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 1.1e-117 427.2 249 81.5
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 4.0e-117 425.2 279 75.3
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 9.2e-114 414.1 300 69.3
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 1.2e-113 413.7 270 75.9
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.1e-113 412.9 234 83.3
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 2.1e-113 412.9 237 82.3
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 8.6e-112 407.5 267 71.9
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.1e-111 407.1 247 79.8
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.0e-108 396.4 291 67.0
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.7e-107 393.3 222 83.8
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 5.6e-95 351.7 292 58.9
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 9.6e-95 350.9 238 73.5
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 2.2e-91 339.7 292 57.9
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 7.1e-90 334.7 290 56.9
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.4e-85 320.5 404 46.8
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 2.7e-81 306.2 282 61.0
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 9.0e-77 291.2 208 67.8
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 3.2e-66 256.1 271 50.9
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.8e-64 250.4 256 56.6
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 1.2e-57 227.6 290 41.0
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 2.3e-56 223.4 153 73.9
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 3.3e-55 219.5 241 46.9
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.9e-50 203.8 120 80.8
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 2.7e-49 199.9 190 55.3
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 3.0e-48 196.4 117 75.2
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 6.5e-43 178.7 223 48.0
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 1.7e-38 164.1 175 52.6
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 2.2e-35 153.7 237 40.1
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 4.0e-32 142.9 111 64.0
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 8.6e-27 125.2 82 73.2
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.8e-25 120.2 69 84.1
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 4.5e-20 102.8 53 86.8
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 5.9e-20 102.4 52 92.3
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 8.0e-17 92.0 60 71.7
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 5.2e-16 89.4 55 80.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 2.9e-14 83.6 52 76.9
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 3.7e-14 83.2 189 35.4
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.4e-13 81.3 120 40.0
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 4.6e-12 76.3 59 62.7
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 7.8e-12 75.5 54 72.2
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 3.3e-10 70.1 59 59.3
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 2.8e-09 67.0 160 31.2
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 3.6e-09 66.6 171 29.8
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 1.8e-08 64.3 168 28.6
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 3.1e-08 63.5 161 31.1
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 5.8e-07 59.3 166 28.9
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.2e-06 57.4 83 44.6
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 2.9e-06 57.0 42 69.0
Potri.010G239500 Populus trichocarpa HOM05D005598 ORTHO05D006587 3.7e-06 56.6 59 52.5
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 6.4e-06 55.8 29 82.8
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 8.3e-06 55.5 44 61.4


User provided reference genes

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