Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1408 Ceratophyllum demersum HOM05D004510 ORTHO05D005302 1.1e-203 713.0 353 100.0
CDE06G1114 Ceratophyllum demersum HOM05D004510 ORTHO05D005302 9.4e-190 666.8 347 94.2
PSO384G2406 Papaver somniferum HOM05D004510 ORTHO05D005302 1.4e-156 556.6 341 78.9
TAR623G1468 Trochodendron aralioides HOM05D004510 ORTHO05D005302 3.0e-156 555.4 342 79.2
PSO339G0142 Papaver somniferum HOM05D004510 ORTHO05D005302 6.8e-156 554.3 341 78.3
CSS0020343 Camellia sinensis var. sinensis HOM05D004510 ORTHO05D005302 2.6e-155 552.4 350 76.3
Gohir.A08G005400 Gossypium hirsutum HOM05D004510 ORTHO05D005302 2.2e-154 549.3 343 78.1
QL01p012154 Quercus lobata HOM05D004510 ORTHO05D005302 2.2e-154 549.3 342 78.1
AUR62036195 Chenopodium quinoa HOM05D004510 ORTHO05D005302 2.9e-154 548.9 351 76.9
CiPaw.13G135100 Carya illinoinensis HOM05D004510 ORTHO05D005302 4.9e-154 548.1 342 77.2
Gohir.D08G015800 Gossypium hirsutum HOM05D004510 ORTHO05D005302 6.4e-154 547.7 343 77.8
Gorai.004G010100 Gossypium raimondii HOM05D004510 ORTHO05D005302 6.4e-154 547.7 343 77.8
HPP92_011904 Vanilla planifolia HOM05D004510 ORTHO05D005302 8.3e-154 547.4 340 76.8
Haze_23369 Corylus avellana HOM05D004510 ORTHO05D005302 7.0e-153 544.3 342 77.2
vmacro03323 Vaccinium macrocarpon HOM05D004510 ORTHO05D005302 7.0e-153 544.3 350 75.7
AUR62009750 Chenopodium quinoa HOM05D004510 ORTHO05D005302 7.8e-152 540.8 351 75.8
Hund18760 Selenicereus undatus HOM05D004510 ORTHO05D005302 1.0e-151 540.4 343 77.3
Prupe.6G130700 Prunus persica HOM05D004510 ORTHO05D005302 1.7e-151 539.7 342 75.7
Duzib150G0176 Durio zibethinus HOM05D004510 ORTHO05D005302 2.3e-151 539.3 343 76.1
Thecc.09G282400 Theobroma cacao HOM05D004510 ORTHO05D005302 2.3e-151 539.3 343 77.0
Hma1.2p1_0587F.1_g184290 Hydrangea macrophylla HOM05D004510 ORTHO05D005302 3.0e-151 538.9 358 74.0
Manes.11G162300 Manihot esculenta HOM05D004510 ORTHO05D005302 3.0e-151 538.9 350 75.4
GSVIVG01036116001 Vitis vinifera HOM05D004510 ORTHO05D005302 3.9e-151 538.5 342 76.6
COL.COLO4_19854 Corchorus olitorius HOM05D004510 ORTHO05D005302 8.6e-151 537.3 343 76.1
MD03G1145900 Malus domestica HOM05D004510 ORTHO05D005302 1.1e-150 537.0 342 75.1
Aqoxy4G02763 Aquilegia oxysepala HOM05D004510 ORTHO05D005302 1.5e-150 536.6 341 75.4
Lj3g0009034 Lotus japonicus HOM05D004510 ORTHO05D005302 1.5e-150 536.6 342 76.6
Actinidia24221 Actinidia chinensis HOM05D004510 ORTHO05D005302 3.3e-150 535.4 350 74.6
FAN16G1814 Fragaria x ananassa HOM05D004510 ORTHO05D005302 4.3e-150 535.0 342 74.9
Atru.chr3.3236 Acer truncatum HOM05D004510 ORTHO05D005302 5.6e-150 534.6 342 75.7
PGR102G0622 Punica granatum HOM05D004510 ORTHO05D005302 7.3e-150 534.3 350 74.6
Nitab4.5_0000755g0090 Nicotiana tabacum HOM05D004510 ORTHO05D005302 1.2e-149 533.5 350 74.0
FAN25G2046 Fragaria x ananassa HOM05D004510 ORTHO05D005302 1.6e-149 533.1 342 74.6
FvH4_3g24980 Fragaria vesca HOM05D004510 ORTHO05D005302 2.8e-149 532.3 343 74.9
FAN21G2427 Fragaria x ananassa HOM05D004510 ORTHO05D005302 2.8e-149 532.3 343 74.9
Phvul.011G094800 Phaseolus vulgaris HOM05D004510 ORTHO05D005302 3.6e-149 531.9 342 75.1
Sed0027037 Sechium edule HOM05D004510 ORTHO05D005302 3.6e-149 531.9 342 76.9
Glyma.12G089700 Glycine max HOM05D004510 ORTHO05D005302 4.7e-149 531.6 344 76.5
Nn6g34880 Nelumbo nucifera HOM05D004510 ORTHO05D005302 4.7e-149 531.6 348 76.1
Sabra04G0136400 Salix brachista HOM05D004510 ORTHO05D005302 4.7e-149 531.6 350 74.9
Eucgr.B03845 Eucalyptus grandis HOM05D004510 ORTHO05D005302 6.2e-149 531.2 342 75.4
RcHm_v2.0_Chr5g0044841 Rosa chinensis HOM05D004510 ORTHO05D005302 6.2e-149 531.2 342 74.6
VMungo1127G0197 Vigna mungo HOM05D004510 ORTHO05D005302 6.2e-149 531.2 342 75.1
AL4G21450 Arabidopsis lyrata HOM05D004510 ORTHO05D005302 1.4e-148 530.0 351 72.6
Glyma.11G182800 Glycine max HOM05D004510 ORTHO05D005302 1.4e-148 530.0 344 75.6
AT2G27460 Arabidopsis thaliana HOM05D004510 ORTHO05D005302 1.8e-148 529.6 351 72.6
Sp4g10250 Schrenkiella parvula HOM05D004510 ORTHO05D005302 1.8e-148 529.6 351 72.9
Carub.0004s0808 Capsella rubella HOM05D004510 ORTHO05D005302 2.3e-148 529.3 351 72.6
Nitab4.5_0012235g0010 Nicotiana tabacum HOM05D004510 ORTHO05D005302 2.3e-148 529.3 350 73.4
PGSC0003DMG400026338 Solanum tuberosum HOM05D004510 ORTHO05D005302 3.1e-148 528.9 350 73.4
TPR.G17233 Trifolium pratense HOM05D004510 ORTHO05D005302 3.1e-148 528.9 343 75.2
Aa31LG5G8800 Aethionema arabicum HOM05D004510 ORTHO05D005302 4.0e-148 528.5 378 69.6
CANSAT54G0764 Cannabis sativa HOM05D004510 ORTHO05D005302 4.0e-148 528.5 343 74.1
CAN.G1524.4 Capsicum annuum HOM05D004510 ORTHO05D005302 4.0e-148 528.5 350 73.4
FAN11G3425 Fragaria x ananassa HOM05D004510 ORTHO05D005302 4.0e-148 528.5 343 74.9
Peaxi162Scf00040g00020 Petunia axillaris HOM05D004510 ORTHO05D005302 4.0e-148 528.5 350 73.1
Medtr4g052930 Medicago truncatula HOM05D004510 ORTHO05D005302 8.9e-148 527.3 343 75.2
Oeu035565.1 Olea europaea HOM05D004510 ORTHO05D005302 1.2e-147 526.9 350 72.9
Ca_19411_v3 Cicer arietinum L. HOM05D004510 ORTHO05D005302 1.5e-147 526.6 343 74.9
Ciclev10027862m.g Citrus clementina HOM05D004510 ORTHO05D005302 1.5e-147 526.6 342 74.6
EL10Ac7g15829 Beta vulgaris HOM05D004510 ORTHO05D005302 2.0e-147 526.2 393 69.2
CARHR120110 Cardamine hirsuta HOM05D004510 ORTHO05D005302 2.6e-147 525.8 351 71.8
Psat7g187800 Pisum sativum HOM05D004510 ORTHO05D005302 3.4e-147 525.4 343 74.6
Potri.004G201800 Populus trichocarpa HOM05D004510 ORTHO05D005302 3.4e-147 525.4 350 74.3
Cc01_g09050 Coffea canephora HOM05D004510 ORTHO05D005302 4.4e-147 525.0 350 73.4
MELO3C004700.2 Cucumis melo HOM05D004510 ORTHO05D005302 4.4e-147 525.0 342 75.4
Sopen11g027210 Solanum pennellii HOM05D004510 ORTHO05D005302 4.4e-147 525.0 350 72.9
CsaV3_1G014870 Cucumis sativus L. HOM05D004510 ORTHO05D005302 5.8e-147 524.6 342 75.4
Thhalv10016271m.g Eutrema salsugineum HOM05D004510 ORTHO05D005302 5.8e-147 524.6 351 72.4
Potri.009G163300 Populus trichocarpa HOM05D004510 ORTHO05D005302 5.8e-147 524.6 350 74.0
THA.LOC104826427 Tarenaya hassleriana HOM05D004510 ORTHO05D005302 9.8e-147 523.9 350 74.0
Solyc11g068500.2 Solanum lycopersicum HOM05D004510 ORTHO05D005302 1.7e-146 523.1 350 72.6
BolC4t27208H Brassica oleracea HOM05D004510 ORTHO05D005302 4.9e-146 521.5 351 72.4
Sabra09G0127400 Salix brachista HOM05D004510 ORTHO05D005302 4.9e-146 521.5 350 74.0
HanXRQChr13g0397471 Helianthus annuus HOM05D004510 ORTHO05D005302 6.4e-146 521.2 350 72.6
arahy.Tifrunner.gnm1.ann1.G66SVD Arachis hypogaea HOM05D004510 ORTHO05D005302 1.1e-145 520.4 342 74.3
arahy.Tifrunner.gnm1.ann1.CJK6JS Arachis hypogaea HOM05D004510 ORTHO05D005302 3.2e-145 518.8 342 74.0
C04p56760 Brassica napus HOM05D004510 ORTHO05D005302 3.2e-145 518.8 351 72.1
A04p20970 Brassica napus HOM05D004510 ORTHO05D005302 1.2e-144 516.9 351 71.8
BraA04t17666Z Brassica rapa HOM05D004510 ORTHO05D005302 1.2e-144 516.9 351 71.8
HanXRQChr16g0526961 Helianthus annuus HOM05D004510 ORTHO05D005302 1.2e-144 516.9 350 71.7
Lalb_Chr03g0028121 Lupinus albus HOM05D004510 ORTHO05D005302 1.2e-144 516.9 342 73.4
BcaB02g10090 Brassica carinata HOM05D004510 ORTHO05D005302 1.6e-144 516.5 351 71.2
Lalb_Chr19g0136431 Lupinus albus HOM05D004510 ORTHO05D005302 2.0e-144 516.2 342 74.3
ATR0776G017 Amborella trichopoda HOM05D004510 ORTHO05D005302 4.6e-144 515.0 340 74.4
DCAR_010345 Daucus carota HOM05D004510 ORTHO05D005302 4.6e-144 515.0 348 72.7
SalBow3G0413 Salvia bowleyana HOM05D004510 ORTHO05D005302 7.8e-144 514.2 350 70.9
BcaC02g10877 Brassica carinata HOM05D004510 ORTHO05D005302 2.3e-143 512.7 351 70.7
C04p24140 Brassica napus HOM05D004510 ORTHO05D005302 2.3e-143 512.7 351 70.7
BolC4t23911H Brassica oleracea HOM05D004510 ORTHO05D005302 2.3e-143 512.7 351 70.7
Migut.N02488 Erythranthe guttata HOM05D004510 ORTHO05D005302 2.3e-143 512.7 350 70.6
THA.LOC104815723 Tarenaya hassleriana HOM05D004510 ORTHO05D005302 2.3e-143 512.7 343 73.5
Rhsim13G0112600 Rhododendron simsii HOM05D004510 ORTHO05D005302 3.0e-143 512.3 408 65.0
A07p18220 Brassica napus HOM05D004510 ORTHO05D005302 1.1e-142 510.4 351 70.4
ECA233G5657 Erigeron canadensis HOM05D004510 ORTHO05D005302 1.5e-142 510.0 350 71.4
BraA07t29538Z Brassica rapa HOM05D004510 ORTHO05D005302 2.5e-142 509.2 352 70.5
SEGI_33849 Sequoiadendron giganteum HOM05D004510 ORTHO05D005302 7.3e-142 507.7 341 71.8
Lsat_1_v5_gn_6_38881 Lactuca sativa HOM05D004510 ORTHO05D005302 2.1e-141 506.1 350 71.1
SGA_v2.0_scaffold295G47522 Striga asiatica HOM05D004510 ORTHO05D005302 6.2e-141 504.6 342 72.2
Gohir.D05G083300 Gossypium hirsutum HOM05D004510 ORTHO05D005302 2.0e-139 499.6 357 70.3
TWI31G0469 Tripterygium wilfordii HOM05D004510 ORTHO05D005302 4.9e-138 495.0 340 72.1
Lj1C236G5 Lonicera japonica HOM05D004510 ORTHO05D005302 3.5e-136 488.8 483 54.9
MD11G1164800 Malus domestica HOM05D004510 ORTHO05D005302 1.3e-135 486.9 342 69.6
unitig_8.g2975 Utricularia gibba HOM05D001558 ORTHO05D005302 5.1e-135 485.0 350 67.4
Zm00001eb288910 Zea mays HOM05D004510 ORTHO05D005302 2.3e-132 476.1 339 67.8
Os05g0443300 Oryza sativa ssp. japonica HOM05D004510 ORTHO05D005302 8.9e-132 474.2 347 66.6
Zm00001eb348320 Zea mays HOM05D004510 ORTHO05D005302 2.6e-131 472.6 339 67.0
Sc21g0007070 Simmondsia chinensis HOM05D004510 ORTHO05D005302 7.1e-129 464.5 303 74.3
Mapoly0020s0029 Marchantia polymorpha HOM05D004510 ORTHO05D005302 1.5e-126 456.8 351 64.4
SGA_v2.0_scaffold177G39411 Striga asiatica HOM05D004510 ORTHO05D005302 4.0e-124 448.7 342 64.9
Gorai.009G085000 Gossypium raimondii HOM05D004510 ORTHO05D005302 8.9e-124 447.6 340 67.6
Pp3c9_6480 Physcomitrium patens HOM05D004510 ORTHO05D005302 3.4e-123 445.7 352 62.2
Pp3c9_12900 Physcomitrium patens HOM05D004510 ORTHO05D005302 1.2e-120 437.2 350 62.9
SMO119G0407 Selaginella moellendorffii HOM05D004510 ORTHO05D005302 4.6e-120 435.3 340 62.6
AagrBONN_evm.TU.Sc2ySwM_369.588 Anthoceros agrestis HOM05D004510 ORTHO05D005302 1.3e-117 427.2 348 60.6
SHI33806 Sapria himalayana HOM05D000105 ORTHO05D000023 3.4e-115 419.1 342 63.5
RcHm_v2.0_Chr5g0045601 Rosa chinensis HOM05D004510 ORTHO05D005302 4.8e-109 398.7 280 70.0
Ah.08g215670 Amaranthus hybridus HOM05D004510 ORTHO05D005302 8.1e-109 397.9 351 60.4
Os04g0412900 Oryza sativa ssp. japonica HOM05D004510 ORTHO05D005302 5.3e-108 395.2 339 58.7
ClCG01G011880 Citrullus lanatus HOM05D004510 ORTHO05D005302 1.9e-105 386.7 246 77.6
CBR_g98 Chara braunii HOM05D004510 ORTHO05D005302 1.6e-104 383.6 382 51.0
Gohir.A05G080300 Gossypium hirsutum HOM05D004510 ORTHO05D005302 1.5e-102 377.1 343 60.3
RcHm_v2.0_Chr5g0040981 Rosa chinensis HOM05D004510 ORTHO05D005302 1.9e-102 376.7 254 72.8
Zm00001eb421940 Zea mays HOM05D004510 ORTHO05D005302 2.1e-101 373.2 340 54.7
Dinv22838 Davidia involucrata HOM05D004510 ORTHO05D005302 1.5e-99 367.1 230 77.4
Cpa.g.sc3326.1 Carica papaya HOM05D004510 ORTHO05D005302 4.2e-97 359.0 230 77.0
Pp3c9_6470 Physcomitrium patens HOM05D004510 ORTHO05D005302 1.4e-73 280.8 205 67.3
PRCOL_00001783 Prasinoderma coloniale HOM05D004510 ORTHO05D005302 4.5e-67 259.2 375 39.5
MCO07G305 Micromonas commoda HOM05D004510 ORTHO05D005302 1.4e-63 247.7 338 37.9
Dinv42548 Davidia involucrata HOM05D004510 ORTHO05D005302 2.5e-57 226.9 139 77.7
Cpa.g.sc2302.1 Carica papaya HOM05D004510 ORTHO05D005302 4.4e-46 189.5 120 75.8
RcHm_v2.0_Chr5g0044471 Rosa chinensis HOM05D004510 ORTHO05D005302 3.2e-36 156.8 108 72.2
MBI17_g08333_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 1.6e-35 154.5 95 77.9
ClCG01G011910 Citrullus lanatus HOM05D004510 ORTHO05D005302 4.9e-29 132.9 65 89.2
Cpa.g.sc32.21 Carica papaya HOM05D004510 ORTHO05D005302 1.9e-25 120.9 65 81.5
Gorai.007G089400 Gossypium raimondii HOM05D004510 ORTHO05D005302 4.3e-25 119.8 65 80.0
RcHm_v2.0_Chr5g0044481 Rosa chinensis HOM05D004510 ORTHO05D005302 2.1e-24 117.5 64 79.7
Gohir.D11G227001 Gossypium hirsutum HOM05D004510 ORTHO05D005302 3.6e-24 116.7 60 85.0
Gohir.D06G076550 Gossypium hirsutum HOM05D004510 ORTHO05D005302 8.1e-24 115.5 65 78.5
RcHm_v2.0_Chr1g0324351 Rosa chinensis HOM05D004510 ORTHO05D005302 1.5e-22 111.3 64 75.0
RcHm_v2.0_Chr5g0016621 Rosa chinensis HOM05D004510 ORTHO05D005302 1.5e-22 111.3 64 75.0
CSS0032823 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D005302 7.1e-20 102.4 78 66.7
RcHm_v2.0_Chr5g0040971 Rosa chinensis HOM05D004510 ORTHO05D005302 1.9e-17 94.4 49 81.6
Gohir.D06G132050 Gossypium hirsutum HOM05D004510 ORTHO05D005302 4.7e-16 89.7 45 86.7
Gohir.D11G083850 Gossypium hirsutum HOM05D004510 ORTHO05D005302 9.9e-14 82.0 42 85.7
Pp3c2_38440 Physcomitrium patens HOM05D004510 ORTHO05D005302 2.2e-13 80.9 99 45.5
Pp3c17_10 Physcomitrium patens HOM05D004510 ORTHO05D005302 1.2e-11 75.1 94 44.7
Pp3c23_90 Physcomitrium patens HOM05D004510 ORTHO05D005302 1.2e-11 75.1 94 44.7
Pp3c26_15780 Physcomitrium patens HOM05D004510 ORTHO05D005302 8.7e-10 68.9 97 42.3
BcaB01g01177 Brassica carinata HOM05D004510 ORTHO05D005302 1.8e-07 61.2 67 44.8
Cre09.g392504 Chlamydomonas reinhardtii HOM05D004510 ORTHO05D005302 9.9e-06 55.5 58 36.2


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