Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.8e-154 549.7 370 100.0
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 2.7e-147 525.8 370 96.8
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 5.4e-87 325.5 376 73.7
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 6.8e-82 308.5 375 72.0
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.6e-78 297.4 374 68.7
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 6.2e-75 285.4 376 67.8
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 8.1e-75 285.0 383 68.7
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 1.4e-74 284.3 378 69.6
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 5.2e-74 282.3 378 68.0
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 1.2e-73 281.2 379 68.3
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 2.0e-73 280.4 369 67.8
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 3.4e-73 279.6 379 67.8
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 3.4e-73 279.6 379 67.8
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 5.8e-73 278.9 377 67.9
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 3.7e-72 276.2 379 66.8
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 6.4e-72 275.4 369 67.5
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.1e-71 274.6 376 56.1
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 5.4e-71 272.3 376 68.1
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 9.2e-71 271.6 375 66.1
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 2.7e-70 270.0 379 67.0
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 3.5e-70 269.6 379 67.0
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 4.6e-70 269.2 377 66.8
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 4.6e-70 269.2 377 66.8
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 6.0e-70 268.9 375 66.4
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 6.0e-70 268.9 379 67.0
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 7.8e-70 268.5 379 67.0
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 1.0e-69 268.1 380 68.2
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 1.0e-69 268.1 350 72.0
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 1.7e-69 267.3 379 52.0
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 2.3e-69 266.9 378 51.3
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 2.3e-69 266.9 379 66.5
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 2.3e-69 266.9 380 66.8
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 6.6e-69 265.4 377 66.6
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 1.1e-68 264.6 375 65.3
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 1.5e-68 264.2 373 66.8
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 9.5e-68 261.5 378 66.1
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.1e-67 260.4 406 53.2
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 2.8e-67 260.0 380 65.3
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 4.7e-67 259.2 399 63.7
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.1e-66 258.1 378 65.9
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.4e-66 257.7 379 64.4
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 1.4e-66 257.7 376 66.2
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 1.4e-66 257.7 366 66.1
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 1.4e-66 257.7 369 64.5
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 1.8e-66 257.3 379 65.7
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 1.8e-66 257.3 376 65.4
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 4.0e-66 256.1 378 65.9
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 4.0e-66 256.1 367 55.6
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 6.8e-66 255.4 378 65.6
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 1.5e-65 254.2 345 63.8
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 3.4e-65 253.1 376 65.7
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 4.4e-65 252.7 375 64.0
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 7.6e-65 251.9 389 63.0
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 9.9e-65 251.5 382 65.4
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 1.3e-64 251.1 377 65.0
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 3.7e-64 249.6 335 68.4
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 4.9e-64 249.2 374 65.0
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 6.4e-64 248.8 379 63.9
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 6.4e-64 248.8 379 64.4
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.1e-63 248.1 375 65.3
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 2.4e-63 246.9 369 64.5
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 4.1e-63 246.1 373 64.3
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 4.1e-63 246.1 380 56.1
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 7.1e-63 245.4 331 69.2
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 1.6e-62 244.2 374 66.6
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 1.6e-62 244.2 375 65.1
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 2.7e-62 243.4 379 63.9
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 2.7e-62 243.4 388 60.1
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 7.8e-62 241.9 375 63.7
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 1.0e-61 241.5 382 62.3
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 2.3e-61 240.4 381 62.7
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 5.1e-61 239.2 361 64.0
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 2.5e-60 236.9 384 64.1
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 7.3e-60 235.3 369 63.4
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 1.2e-59 234.6 329 70.2
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 2.4e-58 230.3 345 63.2
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 2.4e-58 230.3 345 63.2
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 2.4e-58 230.3 378 61.6
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 1.2e-57 228.0 345 63.2
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 1.5e-57 227.6 301 69.4
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 4.4e-57 226.1 345 62.9
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 5.8e-57 225.7 379 42.0
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 5.8e-57 225.7 367 63.2
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 3.8e-56 223.0 351 67.2
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 4.9e-56 222.6 351 67.0
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 8.4e-56 221.9 329 66.3
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 2.4e-55 220.3 276 73.2
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 5.4e-55 219.2 282 72.3
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 7.1e-55 218.8 359 64.1
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 2.1e-54 217.2 385 60.0
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 4.6e-54 216.1 275 68.0
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 5.1e-53 212.6 338 62.7
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 6.6e-53 212.2 345 62.0
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 1.1e-52 211.5 386 58.8
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.5e-52 211.1 489 34.4
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 1.9e-52 210.7 388 59.0
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 7.3e-52 208.8 351 59.5
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 9.6e-52 208.4 383 59.5
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 1.6e-51 207.6 361 61.5
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 3.6e-51 206.5 386 58.3
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 4.8e-51 206.1 352 59.9
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 1.2e-49 201.4 325 65.8
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 2.0e-49 200.7 384 58.9
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 2.6e-49 200.3 345 59.7
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 3.4e-49 199.9 335 66.0
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 9.9e-49 198.4 362 47.8
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 1.3e-48 198.0 365 47.7
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 6.6e-45 185.7 332 53.3
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 6.2e-43 179.1 322 65.8
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 1.1e-42 178.3 358 57.8
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 5.3e-42 176.0 361 56.8
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.2e-41 174.9 338 58.9
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 2.1e-38 164.1 134 74.6
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 3.5e-38 163.3 379 52.5
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 1.0e-37 161.8 134 76.1
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 1.0e-37 161.8 263 65.4
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 3.0e-37 160.2 242 69.0
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 8.7e-37 158.7 289 60.6
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 9.6e-36 155.2 134 72.4
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 2.4e-34 150.6 358 53.6
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 7.9e-30 135.6 187 54.5
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 1.0e-29 135.2 113 72.6
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 5.1e-29 132.9 164 50.6
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 7.4e-28 129.0 360 51.7
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 3.1e-26 123.6 257 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 2.6e-25 120.6 254 61.4
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 5.9e-25 119.4 179 47.5
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 1.1e-23 115.2 174 46.0
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 2.1e-22 110.9 134 58.2
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 7.9e-22 109.0 95 60.0
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 2.8e-19 100.5 376 46.8
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 2.6e-17 94.0 229 54.1
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 1.3e-16 91.7 139 45.3
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea HOM05D005383 ORTHO05D006722 2.5e-12 77.4 86 70.9
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 9.7e-12 75.5 60 65.0
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 1.7e-11 74.7 58 67.2
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea HOM05D005383 ORTHO05D006722 8.2e-11 72.4 58 65.5


User provided reference genes

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