Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 0.0e+00 1295.4 675 100.0
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 0.0e+00 1181.0 678 91.6
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.0e-200 704.1 720 56.0
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 1.4e-189 667.2 723 53.4
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 4.0e-189 665.6 719 54.7
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 9.8e-188 661.0 721 54.5
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 4.9e-187 658.7 720 53.1
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 6.4e-187 658.3 718 54.7
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 2.1e-185 653.3 715 54.8
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 4.6e-185 652.1 713 53.7
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 1.7e-184 650.2 713 53.7
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 3.9e-184 649.0 714 53.2
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 5.6e-183 645.2 715 52.9
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 6.2e-182 641.7 708 52.7
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 2.3e-181 639.8 730 52.3
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 1.3e-179 634.0 714 52.5
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.7e-179 633.6 712 52.0
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 6.4e-179 631.7 719 52.4
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 5.4e-178 628.6 710 51.3
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 7.1e-178 628.2 715 52.6
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 3.5e-177 625.9 716 51.7
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 6.0e-177 625.2 717 52.4
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 2.3e-176 623.2 713 52.3
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 8.6e-176 621.3 719 51.9
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 1.1e-175 620.9 718 51.8
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 4.3e-175 619.0 713 52.9
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 1.2e-174 617.5 718 52.8
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 2.1e-174 616.7 709 52.2
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.6e-174 615.9 717 51.3
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 3.6e-174 615.9 710 52.1
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 8.1e-174 614.8 716 51.1
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 1.1e-173 614.4 700 53.7
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.1e-173 614.4 711 52.2
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 5.2e-173 612.1 713 52.7
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 5.2e-173 612.1 702 52.6
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 8.9e-173 611.3 717 52.0
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.2e-172 610.9 724 51.4
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.5e-172 610.5 717 50.9
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 1.5e-172 610.5 715 50.8
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 3.4e-172 609.4 723 52.3
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 5.8e-172 608.6 724 51.2
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 5.8e-172 608.6 715 50.9
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 1.3e-171 607.4 715 52.0
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 1.1e-170 604.4 729 50.1
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 1.1e-170 604.4 724 51.1
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 2.4e-170 603.2 730 51.0
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 3.2e-170 602.8 712 51.7
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 4.2e-170 602.4 695 51.5
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 2.1e-169 600.1 721 51.9
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 4.6e-169 599.0 721 51.5
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 4.6e-169 599.0 715 50.2
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 6.0e-169 598.6 715 51.3
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 7.8e-169 598.2 721 52.0
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 1.3e-168 597.4 711 51.6
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.7e-168 597.0 717 50.1
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 3.9e-168 595.9 717 49.9
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 6.6e-168 595.1 713 50.9
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 8.7e-168 594.7 712 52.0
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 1.1e-167 594.3 711 50.5
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 1.5e-167 594.0 710 50.0
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 3.3e-167 592.8 720 50.3
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 4.3e-167 592.4 707 50.6
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 4.3e-167 592.4 724 50.1
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.3e-166 590.9 709 51.3
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 1.6e-166 590.5 715 50.3
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 2.1e-166 590.1 712 50.8
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 2.8e-166 589.7 710 51.3
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 2.8e-166 589.7 726 49.4
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 3.1e-165 586.3 712 50.6
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 4.0e-165 585.9 711 50.9
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 5.3e-165 585.5 718 50.0
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 5.3e-165 585.5 707 50.1
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 1.2e-164 584.3 724 51.4
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 3.4e-164 582.8 732 50.3
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 1.7e-163 580.5 708 49.7
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 3.8e-163 579.3 708 50.6
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 4.9e-163 578.9 707 49.5
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 4.9e-163 578.9 708 49.9
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 1.4e-162 577.4 708 49.3
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 4.2e-162 575.9 719 48.7
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 7.1e-162 575.1 710 50.1
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 1.2e-161 574.3 708 49.7
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 1.6e-161 573.9 710 49.2
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 2.1e-161 573.5 705 51.1
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 2.7e-161 573.2 717 49.0
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 4.6e-161 572.4 707 49.9
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 6.0e-161 572.0 707 49.1
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 7.9e-161 571.6 714 48.3
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 7.9e-161 571.6 714 48.3
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 1.0e-160 571.2 718 48.1
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 1.3e-160 570.9 704 50.3
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.3e-160 570.9 716 49.7
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 2.3e-160 570.1 714 49.6
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 3.0e-160 569.7 710 48.5
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 5.1e-160 568.9 701 49.2
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 1.5e-159 567.4 704 49.6
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 2.5e-159 566.6 717 51.0
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 3.3e-159 566.2 717 49.8
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 3.3e-159 566.2 717 50.8
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 5.6e-159 565.5 711 49.6
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 1.6e-158 563.9 712 49.0
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.8e-158 563.1 713 49.6
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 3.6e-158 562.8 713 49.6
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 1.4e-157 560.8 705 49.1
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 2.4e-157 560.1 709 49.2
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 9.0e-157 558.1 705 49.2
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 1.7e-155 553.9 726 48.1
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 7.1e-154 548.5 705 48.5
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 6.0e-153 545.4 714 48.9
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 7.9e-153 545.0 717 47.8
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.0e-152 544.7 715 47.4
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 2.3e-152 543.5 705 49.9
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 5.6e-151 538.9 716 48.2
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 8.1e-150 535.0 874 42.9
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 9.0e-149 531.6 711 48.8
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 9.0e-149 531.6 719 46.9
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.6e-140 503.4 719 46.6
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.3e-139 501.1 709 46.7
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 7.2e-138 495.4 731 45.0
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 8.7e-136 488.4 702 44.2
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 7.4e-135 485.3 679 45.7
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 1.3e-134 484.6 697 46.8
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 4.8e-134 482.6 731 43.6
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 2.0e-132 477.2 386 65.5
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.0e-128 464.9 651 45.2
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 7.2e-122 442.2 374 61.0
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 7.2e-122 442.2 374 61.0
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.4e-120 438.0 373 64.1
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.3e-120 437.2 697 43.3
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 1.6e-108 397.9 321 65.7
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 7.7e-108 395.6 319 67.4
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 7.2e-98 362.5 711 38.0
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 3.0e-96 357.1 750 37.6
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 6.6e-91 339.3 553 43.4
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 2.1e-89 334.3 775 34.6
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 6.8e-88 329.3 737 36.5
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 2.7e-84 317.4 608 37.3
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.2e-81 308.5 600 39.3
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.6e-65 255.0 492 39.6
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 5.8e-63 246.5 615 32.8
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 1.2e-57 228.8 501 34.5
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.2e-55 222.2 351 43.3
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 1.2e-55 222.2 398 38.7
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 3.0e-51 207.6 392 39.0
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 4.3e-50 203.8 390 38.7
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 7.3e-50 203.0 151 68.9
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 3.7e-41 174.1 158 57.0
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 6.4e-38 163.3 240 42.9
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 8.7e-35 152.9 162 53.1
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 2.9e-30 137.9 165 50.3
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 4.9e-30 137.1 323 36.8
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 4.6e-28 130.6 356 32.3
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.3e-25 122.5 330 35.5
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.6e-25 122.1 390 28.7
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.2e-23 115.9 69 81.2
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 2.6e-23 114.8 69 79.7
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 3.4e-23 114.4 375 28.5
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 6.7e-19 100.1 62 79.0
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 1.5e-18 99.0 538 24.5
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.8e-17 94.7 57 80.7
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 4.1e-16 90.9 76 60.5
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 1.2e-15 89.4 244 35.2
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 2.6e-15 88.2 51 84.3
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 2.6e-15 88.2 61 70.5
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 2.2e-14 85.1 51 82.4
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 5.1e-11 73.9 88 47.7
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.1e-10 72.8 88 47.7
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.4e-08 65.1 59 57.6
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 1.7e-06 58.9 90 44.4


User provided reference genes

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