Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0903 Ceratophyllum demersum HOM05D005018 ORTHO05D006786 6.3e-52 207.2 109 100.0
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.2e-32 141.4 97 71.1
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.2e-32 141.4 97 71.1
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 6.1e-31 137.5 90 74.4
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 8.0e-31 137.1 98 73.5
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 2.3e-30 135.6 90 75.6
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 3.0e-30 135.2 90 73.3
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 3.0e-30 135.2 93 75.3
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 1.2e-29 133.3 82 81.7
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 1.5e-29 132.9 90 74.4
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 1.5e-29 132.9 90 74.4
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 2.6e-29 132.1 95 70.5
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 2.6e-29 132.1 93 75.3
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 2.6e-29 132.1 98 70.4
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 3.4e-29 131.7 94 71.3
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 3.4e-29 131.7 85 76.5
Cpa.g.sc1441.2 Carica papaya HOM05D005018 ORTHO05D006786 5.7e-29 131.0 82 81.7
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 5.7e-29 131.0 96 74.0
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 7.5e-29 130.6 90 73.3
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 1.3e-28 129.8 84 76.2
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 1.3e-28 129.8 95 70.5
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 1.7e-28 129.4 88 76.1
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 2.8e-28 128.6 85 76.5
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 2.8e-28 128.6 90 72.2
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.8e-28 128.6 90 72.2
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 3.7e-28 128.3 95 70.5
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 3.7e-28 128.3 90 72.2
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 4.8e-28 127.9 90 71.1
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 4.8e-28 127.9 88 73.9
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 6.3e-28 127.5 90 71.1
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 6.3e-28 127.5 85 75.3
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 8.3e-28 127.1 94 69.1
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 8.3e-28 127.1 95 70.5
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 8.3e-28 127.1 95 70.5
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 8.3e-28 127.1 94 70.2
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 8.3e-28 127.1 89 75.3
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 8.3e-28 127.1 86 73.3
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 1.1e-27 126.7 88 68.2
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 1.4e-27 126.3 82 78.0
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 1.8e-27 125.9 78 82.1
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 3.1e-27 125.2 78 80.8
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 3.1e-27 125.2 86 70.9
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 4.1e-27 124.8 88 70.5
Ah.06g190940 Amaranthus hybridus HOM05D005018 ORTHO05D006786 5.4e-27 124.4 93 64.5
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 7.0e-27 124.0 88 71.6
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 7.0e-27 124.0 88 71.6
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 7.0e-27 124.0 88 71.6
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 9.1e-27 123.6 78 80.8
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 1.2e-26 123.2 78 76.9
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 1.2e-26 123.2 78 76.9
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.6e-26 122.9 88 70.5
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 1.6e-26 122.9 86 70.9
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 1.6e-26 122.9 86 72.1
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 1.6e-26 122.9 90 71.1
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.0e-26 122.5 80 77.5
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 2.7e-26 122.1 95 66.3
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 5.9e-26 120.9 80 77.5
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 5.9e-26 120.9 82 72.0
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 5.9e-26 120.9 78 76.9
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 5.9e-26 120.9 76 80.3
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 1.0e-25 120.2 76 78.9
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 1.0e-25 120.2 76 78.9
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 1.0e-25 120.2 87 69.0
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.0e-25 120.2 85 71.8
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 1.3e-25 119.8 72 79.2
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 1.3e-25 119.8 76 78.9
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 1.7e-25 119.4 81 74.1
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 2.9e-25 118.6 82 70.7
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 6.5e-25 117.5 94 67.0
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 6.5e-25 117.5 90 64.4
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 8.6e-25 117.1 89 65.2
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 8.6e-25 117.1 67 85.1
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 8.6e-25 117.1 82 70.7
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 1.1e-24 116.7 91 63.7
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 1.1e-24 116.7 86 70.9
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.9e-24 115.9 75 77.3
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 1.9e-24 115.9 76 78.9
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 1.9e-24 115.9 93 67.7
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 2.5e-24 115.5 84 69.0
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 2.5e-24 115.5 91 69.2
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 4.2e-24 114.8 94 68.1
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 9.5e-24 113.6 64 87.5
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.6e-23 112.8 80 71.2
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 2.1e-23 112.5 66 81.8
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 2.8e-23 112.1 84 65.5
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 3.6e-23 111.7 84 66.7
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 8.0e-23 110.5 84 64.3
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.3e-22 109.0 86 68.6
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 3.0e-22 108.6 85 64.7
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 6.8e-22 107.5 95 61.1
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 8.9e-22 107.1 80 67.5
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 8.9e-22 107.1 80 67.5
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 1.2e-21 106.7 80 67.5
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 1.2e-21 106.7 80 67.5
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 2.0e-21 105.9 84 63.1
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 3.4e-21 105.1 80 67.5
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 3.4e-21 105.1 80 67.5
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 3.4e-21 105.1 83 62.7
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 5.7e-21 104.4 67 77.6
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 1.4e-19 99.8 69 69.6
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 4.1e-19 98.2 66 66.7
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 7.8e-18 94.0 66 65.2
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.2e-15 86.7 59 67.8
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 3.4e-13 78.6 65 53.8
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 7.8e-10 67.4 62 62.9
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.1e-08 63.5 51 70.6
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.5e-08 63.2 67 52.2
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 2.1e-07 59.3 34 76.5
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 8.0e-07 57.4 33 78.8
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 2.3e-06 55.8 47 51.1
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 3.1e-06 55.5 67 41.8


User provided reference genes

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