Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.1e-38 161.8 113 100.0
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 2.3e-20 102.4 63 76.2
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 2.3e-20 102.4 63 79.4
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 2.5e-19 99.0 64 73.4
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 9.5e-19 97.1 63 76.2
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.2e-18 96.7 63 74.6
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 1.2e-18 96.7 65 70.8
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 1.2e-18 96.7 65 70.8
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 2.1e-18 95.9 63 73.0
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 2.8e-18 95.5 63 71.4
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 2.8e-18 95.5 63 71.4
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 3.6e-18 95.1 63 71.4
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 3.6e-18 95.1 64 70.3
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 3.6e-18 95.1 64 70.3
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 3.6e-18 95.1 60 75.0
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 3.6e-18 95.1 64 71.9
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 4.7e-18 94.7 64 67.2
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 6.2e-18 94.4 63 69.8
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 6.2e-18 94.4 63 71.4
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 6.2e-18 94.4 63 69.8
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 6.2e-18 94.4 63 69.8
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 6.2e-18 94.4 63 69.8
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 8.0e-18 94.0 63 69.8
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 8.0e-18 94.0 60 76.7
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.1e-17 93.6 63 69.8
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 1.1e-17 93.6 61 72.1
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 1.1e-17 93.6 63 71.4
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 1.4e-17 93.2 63 69.8
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 1.4e-17 93.2 63 69.8
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 1.4e-17 93.2 63 69.8
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 1.4e-17 93.2 63 71.4
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 1.8e-17 92.8 64 68.8
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 1.8e-17 92.8 63 69.8
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 1.8e-17 92.8 63 73.0
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 2.3e-17 92.4 63 69.8
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 2.3e-17 92.4 63 68.3
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 3.1e-17 92.0 64 71.9
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 3.1e-17 92.0 60 71.7
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-17 92.0 60 71.7
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-17 92.0 60 71.7
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-17 92.0 60 71.7
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 3.1e-17 92.0 60 71.7
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-17 92.0 60 71.7
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.1e-17 92.0 63 69.8
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.1e-17 92.0 63 69.8
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 3.1e-17 92.0 63 69.8
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.1e-17 92.0 60 73.3
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 3.1e-17 92.0 63 68.3
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 4.0e-17 91.7 63 71.4
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 5.2e-17 91.3 60 71.7
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 6.8e-17 90.9 60 70.0
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 8.9e-17 90.5 63 68.3
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 8.9e-17 90.5 63 71.4
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 1.5e-16 89.7 60 70.0
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 2.0e-16 89.4 63 68.3
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 2.0e-16 89.4 63 68.3
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.6e-16 89.0 63 68.3
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.6e-16 89.0 63 68.3
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 2.6e-16 89.0 60 66.7
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.6e-16 89.0 63 71.4
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 3.4e-16 88.6 60 71.7
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 4.4e-16 88.2 60 71.7
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 7.5e-16 87.4 64 65.6
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 7.5e-16 87.4 63 65.1
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 9.8e-16 87.0 63 63.5
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 9.8e-16 87.0 64 64.1
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 9.8e-16 87.0 57 71.9
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 9.8e-16 87.0 57 71.9
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 9.8e-16 87.0 60 71.7
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 1.3e-15 86.7 64 64.1
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 1.7e-15 86.3 55 74.5
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 2.2e-15 85.9 63 71.4
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 2.2e-15 85.9 63 65.1
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 2.2e-15 85.9 64 68.8
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 2.2e-15 85.9 62 66.1
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 2.2e-15 85.9 60 70.0
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.9e-15 85.5 60 65.0
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 2.9e-15 85.5 60 70.0
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 3.7e-15 85.1 64 65.6
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 3.7e-15 85.1 63 63.5
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 3.7e-15 85.1 61 67.2
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 8.3e-15 84.0 60 68.3
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.1e-14 83.6 60 65.0
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 1.1e-14 83.6 63 66.7
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 1.1e-14 83.6 60 63.3
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 9.2e-14 80.5 56 67.9
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 1.2e-13 80.1 63 66.7
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 1.6e-13 79.7 63 65.1
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 1.6e-13 79.7 54 72.2
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 2.7e-13 79.0 61 57.4
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 3.5e-13 78.6 49 77.6
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 7.8e-13 77.4 52 69.2
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 1.0e-12 77.0 61 55.7
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 2.3e-12 75.9 60 63.3
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 5.0e-12 74.7 63 61.9
TPR.G31597 Trifolium pratense HOM05D002281 ORTHO05D006774 1.8e-09 66.2 39 76.9
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 6.8e-09 64.3 62 53.2
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 5.8e-08 61.2 60 45.0
FvH4_6g01352 Fragaria vesca HOM05D002281 ORTHO05D006774 1.3e-07 60.1 39 69.2
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.9e-07 58.9 63 54.0
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 6.4e-07 57.8 60 46.7
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 4.1e-06 55.1 60 43.3


User provided reference genes

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