Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 0.0e+00 1454.1 790 100.0
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 2.5e-235 819.3 817 56.8
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 4.8e-226 788.5 814 54.5
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.2e-221 773.9 820 55.1
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 1.3e-218 763.8 824 52.1
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 5.3e-217 758.4 821 54.6
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 2.0e-216 756.5 825 53.8
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 5.9e-216 755.0 812 52.5
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 7.7e-216 754.6 814 52.2
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 1.0e-215 754.2 816 53.1
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 1.7e-215 753.4 817 51.0
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 3.2e-214 749.2 828 51.4
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 4.2e-214 748.8 830 51.0
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 7.2e-214 748.0 813 52.6
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 2.0e-211 740.0 816 50.4
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 4.3e-211 738.8 825 51.8
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 9.7e-211 737.6 812 51.2
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 9.7e-211 737.6 829 53.0
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 9.7e-211 737.6 832 50.1
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.7e-210 736.9 813 51.9
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 1.1e-209 734.2 826 50.5
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 9.1e-209 731.1 806 51.4
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 7.7e-208 728.0 808 53.1
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 7.7e-208 728.0 829 50.2
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-207 727.2 820 50.9
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 2.2e-207 726.5 816 51.3
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 3.8e-207 725.7 818 51.0
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 6.5e-207 724.9 831 49.8
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.5e-206 723.0 812 52.3
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 4.2e-206 722.2 812 50.5
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 9.4e-206 721.1 819 50.7
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 6.7e-204 714.9 818 50.7
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 6.7e-204 714.9 819 50.2
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 8.8e-204 714.5 784 52.3
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 2.0e-203 713.4 822 50.9
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 7.4e-203 711.4 826 49.6
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 9.7e-203 711.1 807 50.3
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 2.8e-202 709.5 820 50.9
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 3.1e-201 706.1 593 66.9
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.2e-200 704.1 806 52.9
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 1.2e-200 704.1 818 50.1
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 1.6e-200 703.7 817 49.4
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 1.6e-200 703.7 835 49.3
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.2e-199 699.9 849 49.5
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 3.8e-199 699.1 724 53.0
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 9.4e-198 694.5 817 50.1
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 8.0e-197 691.4 838 50.4
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 1.4e-196 690.6 817 48.5
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 6.7e-196 688.3 817 48.3
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 2.0e-195 686.8 812 48.0
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 2.6e-195 686.4 817 48.6
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.7e-192 676.4 807 49.1
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 1.7e-191 673.7 819 52.6
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 2.2e-191 673.3 856 47.7
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 6.5e-191 671.8 828 48.2
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 2.7e-189 666.4 864 44.7
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 6.1e-189 665.2 822 47.0
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 3.7e-186 656.0 897 46.0
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 4.8e-186 655.6 834 47.8
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 1.1e-185 654.4 810 47.4
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 1.3e-183 647.5 513 65.9
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 2.2e-183 646.7 868 45.5
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 3.8e-183 646.0 468 69.7
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 6.5e-183 645.2 717 50.8
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 1.1e-182 644.4 834 47.7
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 1.5e-182 644.0 813 47.1
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 1.5e-182 644.0 808 48.1
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 7.2e-182 641.7 803 47.7
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 6.1e-181 638.6 799 49.2
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 1.0e-180 637.9 809 47.5
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 1.2e-179 634.4 825 46.2
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 3.4e-179 632.9 968 42.8
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 4.4e-179 632.5 846 45.6
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 7.5e-179 631.7 905 49.1
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 1.7e-178 630.6 494 64.2
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 4.1e-177 625.9 905 48.8
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 1.6e-176 624.0 499 63.7
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.7e-176 623.2 825 47.2
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 2.9e-175 619.8 819 45.9
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.5e-174 617.5 811 47.6
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 3.3e-174 616.3 821 46.2
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.3e-174 615.9 821 45.1
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.6e-173 614.0 799 51.6
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 1.0e-172 611.3 751 47.8
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.8e-172 610.5 737 46.7
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 1.5e-171 607.4 717 49.8
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.6e-171 606.7 830 46.5
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 5.7e-171 605.5 914 43.3
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 5.7e-171 605.5 811 48.1
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 2.9e-170 603.2 783 46.6
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 3.5e-168 596.3 824 46.4
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 6.6e-167 592.0 810 45.8
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.1e-166 591.3 776 46.9
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 1.1e-166 591.3 795 45.0
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 1.1e-166 591.3 774 45.2
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 5.6e-166 589.0 819 44.9
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 6.2e-165 585.5 816 46.2
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 8.0e-165 585.1 415 70.4
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 2.9e-162 576.6 823 44.8
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 3.7e-162 576.2 816 45.6
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 3.7e-162 576.2 822 44.5
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 4.9e-162 575.9 787 51.6
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 1.9e-161 573.9 811 45.7
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 2.4e-161 573.5 901 42.7
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 7.3e-158 562.0 356 75.0
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 5.2e-156 555.8 777 49.5
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 1.5e-155 554.3 814 43.5
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 4.9e-154 549.3 358 74.0
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 3.0e-151 540.0 358 73.2
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.5e-150 537.7 343 74.6
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 1.9e-150 537.3 1042 37.3
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 5.1e-143 512.7 448 60.3
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 3.3e-142 510.0 406 63.3
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 3.4e-139 500.0 360 68.3
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 1.3e-138 498.0 384 65.4
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 3.8e-138 496.5 561 49.0
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.3e-135 488.0 349 66.2
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 7.3e-134 482.3 416 62.0
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 3.6e-133 479.9 344 67.2
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 3.1e-132 476.9 662 47.4
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 2.7e-128 463.8 387 61.0
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-125 454.9 631 46.9
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.6e-125 454.5 502 48.8
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 2.4e-124 450.7 385 57.4
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 1.3e-122 444.9 276 75.7
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 1.1e-121 441.8 299 70.2
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 2.7e-120 437.2 378 60.3
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 2.7e-120 437.2 321 67.6
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 3.5e-120 436.8 428 54.2
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 7.9e-120 435.6 440 50.9
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 3.3e-118 430.3 437 51.5
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 9.6e-118 428.7 631 43.6
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.2e-115 421.8 442 50.5
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 9.6e-110 402.1 440 48.2
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 1.2e-107 395.2 806 36.4
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 6.7e-103 379.4 523 42.4
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 7.4e-102 375.9 182 98.4
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 1.1e-100 372.1 594 41.4
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 3.1e-100 370.5 449 45.7
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.5e-97 360.9 242 73.6
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 8.2e-85 319.3 443 44.0
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 6.3e-77 293.1 322 46.6
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.7e-72 277.7 188 73.4
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 4.1e-68 263.8 196 65.8
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.7e-66 258.5 270 50.4
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 5.5e-65 253.4 431 37.1
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 4.1e-60 237.3 153 72.5
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 5.4e-60 236.9 313 39.6
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 4.0e-55 220.7 195 58.5
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 1.7e-53 215.3 567 42.3
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 4.9e-53 213.8 455 35.6
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 2.4e-52 211.5 187 58.3
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 1.4e-44 185.7 101 84.2
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 1.4e-44 185.7 460 32.4
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 1.9e-44 185.3 397 33.2
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 6.0e-43 180.3 467 31.9
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 1.9e-41 175.3 457 31.7
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 9.9e-38 162.9 147 55.8
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 4.9e-37 160.6 365 34.2
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 1.4e-36 159.1 465 29.2
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 2.4e-36 158.3 85 82.4
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 4.0e-31 141.0 469 32.4
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.1e-28 132.9 461 32.3
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 5.2e-23 114.0 63 84.1
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 9.0e-23 113.2 408 28.2
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 3.4e-22 111.3 141 47.5
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 2.2e-21 108.6 65 78.5
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 2.9e-21 108.2 472 26.5
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.4e-20 105.9 470 28.3
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.9e-20 105.5 53 92.5
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.2e-20 104.8 260 32.3
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 1.6e-19 102.4 65 72.3
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 5.1e-18 97.4 127 46.5
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 2.0e-14 85.5 60 70.0
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 4.6e-11 74.3 52 69.2
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 5.1e-10 70.9 63 58.7
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 6.7e-10 70.5 39 89.7
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 8.1e-08 63.5 47 66.0
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 1.1e-07 63.2 32 75.0
arahy.Tifrunner.gnm1.ann1.0536J9 Arachis hypogaea HOM05D000340 ORTHO05D000677 7.6e-06 57.0 38 71.1


User provided reference genes

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