Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G2039 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 5.5e-78 294.3 153 100.0
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 1.7e-26 123.2 70 95.7
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 4.0e-20 102.1 70 78.6
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 6.8e-20 101.3 83 68.7
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 2.6e-19 99.4 83 68.7
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 4.4e-19 98.6 70 78.6
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 7.5e-19 97.8 68 77.9
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 3.7e-18 95.5 70 74.3
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 4.9e-18 95.1 70 70.0
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 4.9e-18 95.1 70 70.0
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 6.4e-18 94.7 70 71.4
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 1.1e-17 94.0 83 62.7
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 1.1e-17 94.0 70 71.4
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 1.9e-17 93.2 70 68.6
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 2.4e-17 92.8 68 72.1
FAN05G3175 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.1e-17 92.0 68 72.1
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.1e-17 92.0 68 72.1
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 4.1e-17 92.0 70 68.6
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 4.1e-17 92.0 70 67.1
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 4.1e-17 92.0 68 70.6
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 4.1e-17 92.0 68 69.1
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 5.4e-17 91.7 68 73.5
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 5.4e-17 91.7 70 68.6
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 7.1e-17 91.3 70 70.0
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 9.2e-17 90.9 68 69.1
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 1.2e-16 90.5 68 72.1
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 1.2e-16 90.5 70 67.1
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 1.6e-16 90.1 70 67.1
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 1.6e-16 90.1 68 69.1
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 2.7e-16 89.4 70 67.1
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 3.5e-16 89.0 68 72.1
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 4.6e-16 88.6 70 68.6
Zm00001eb048500 Zea mays HOM05D005507 ORTHO05D007316 6.0e-16 88.2 73 61.6
Ah.13g075900 Amaranthus hybridus HOM05D005507 ORTHO05D007316 7.8e-16 87.8 88 59.1
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 7.8e-16 87.8 70 67.1
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 7.8e-16 87.8 70 64.3
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 7.8e-16 87.8 70 62.9
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 1.0e-15 87.4 70 67.1
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 1.0e-15 87.4 68 69.1
Zm00001eb371310 Zea mays HOM05D000282 ORTHO05D007316 1.0e-15 87.4 73 61.6
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 1.7e-15 86.7 68 67.6
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 1.7e-15 86.7 73 61.6
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 1.7e-15 86.7 68 67.6
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 2.3e-15 86.3 73 60.3
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 3.0e-15 85.9 70 67.1
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 3.0e-15 85.9 70 67.1
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 3.0e-15 85.9 68 63.2
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 3.9e-15 85.5 66 69.7
Nitab4.5_0011443g0030 Nicotiana tabacum HOM05D005507 ORTHO05D007316 3.9e-15 85.5 68 66.2
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 3.9e-15 85.5 70 61.4
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 5.1e-15 85.1 68 64.7
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 6.6e-15 84.7 70 64.3
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 6.6e-15 84.7 68 64.7
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 8.6e-15 84.3 66 66.7
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 8.6e-15 84.3 68 64.7
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 1.1e-14 84.0 68 64.7
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 1.1e-14 84.0 68 64.7
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 1.1e-14 84.0 68 66.2
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 1.1e-14 84.0 68 66.2
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 1.1e-14 84.0 68 63.2
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 1.5e-14 83.6 68 61.8
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 1.9e-14 83.2 73 57.5
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 1.9e-14 83.2 66 63.6
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 1.9e-14 83.2 68 63.2
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 2.5e-14 82.8 70 61.4
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 4.3e-14 82.0 68 64.7
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 5.6e-14 81.6 66 63.6
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 5.6e-14 81.6 68 61.8
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 7.3e-14 81.3 66 62.1
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 7.3e-14 81.3 68 58.8
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 7.3e-14 81.3 68 58.8
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 7.3e-14 81.3 68 61.8
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 1.2e-13 80.5 66 62.1
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 1.2e-13 80.5 68 60.3
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 1.6e-13 80.1 68 61.8
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 2.1e-13 79.7 66 59.1
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 2.8e-13 79.3 68 58.8
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 2.8e-13 79.3 68 58.8
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 3.6e-13 79.0 66 59.1
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 6.2e-13 78.2 66 59.1
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 6.2e-13 78.2 66 59.1
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 6.2e-13 78.2 66 59.1
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 6.2e-13 78.2 66 59.1
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 6.2e-13 78.2 66 60.6
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 8.1e-13 77.8 64 62.5
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 8.1e-13 77.8 66 57.6
COL.COLO4_18270 Corchorus olitorius HOM05D005507 ORTHO05D007316 1.1e-12 77.4 68 64.7
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 1.1e-12 77.4 66 57.6
SEGI_11448 Sequoiadendron giganteum HOM05D005507 ORTHO05D007316 1.4e-12 77.0 65 56.9
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 1.8e-12 76.6 68 61.8
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 2.3e-12 76.3 68 57.4
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 3.1e-12 75.9 66 56.1
SGA_v2.0_scaffold43G16363 Striga asiatica HOM05D005507 ORTHO05D007316 3.1e-12 75.9 64 60.9
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 4.0e-12 75.5 66 57.6
EL10As1g23036 Beta vulgaris HOM05D005507 ORTHO05D007316 5.2e-12 75.1 56 69.6
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 8.9e-12 74.3 57 71.9
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 1.5e-11 73.6 54 70.4
Nitab4.5_0000705g0220 Nicotiana tabacum HOM05D005507 ORTHO05D007316 2.2e-10 69.7 54 66.7
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 2.2e-10 69.7 55 63.6
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 6.4e-10 68.2 66 53.0


User provided reference genes

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