Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 0.0e+00 1186.8 603 100.0
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 4.8e-303 1043.9 612 88.1
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 5.4e-270 934.1 600 77.2
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 6.2e-266 920.6 599 75.1
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.9e-263 911.8 599 74.5
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 5.6e-259 897.5 604 73.3
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 2.1e-253 879.0 599 72.6
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 3.0e-252 875.2 600 71.8
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 1.3e-247 859.8 602 70.6
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 7.1e-246 854.0 599 71.1
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.7e-244 849.4 603 70.3
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 2.3e-244 849.0 599 69.1
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 1.5e-243 846.3 600 70.0
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 2.1e-242 842.4 598 70.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 6.2e-242 840.9 602 70.1
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 8.1e-242 840.5 601 68.7
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 8.1e-242 840.5 604 69.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 5.8e-240 834.3 619 67.9
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 1.4e-238 829.7 604 68.2
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 3.2e-238 828.6 609 67.7
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 2.7e-237 825.5 601 67.4
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 3.5e-237 825.1 597 68.0
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 4.6e-237 824.7 598 68.4
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 1.7e-236 822.8 634 66.4
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.1e-235 820.1 608 67.8
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 4.3e-235 818.1 601 67.7
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 5.6e-235 817.8 606 68.2
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.1e-234 815.8 614 66.9
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 6.2e-234 814.3 605 67.1
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.8e-233 812.8 603 67.8
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 2.6e-232 808.9 608 66.8
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.2e-230 802.0 630 64.4
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 7.1e-230 800.8 608 66.6
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.6e-229 799.7 614 64.8
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 2.1e-229 799.3 600 66.0
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 2.3e-228 795.8 601 65.4
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 6.7e-228 794.3 599 65.8
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.1e-227 793.5 602 65.6
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 3.3e-227 792.0 607 64.6
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 4.3e-227 791.6 600 65.7
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 5.6e-227 791.2 597 65.5
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.3e-226 790.0 602 65.6
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.6e-226 789.6 597 65.5
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 3.1e-225 785.4 597 64.5
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.1e-225 785.4 597 65.2
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 6.9e-225 784.3 602 63.1
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.6e-224 782.3 599 64.6
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 4.5e-224 781.6 601 64.1
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 4.5e-224 781.6 597 64.8
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 5.8e-224 781.2 606 65.2
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 5.8e-224 781.2 601 65.1
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 2.9e-223 778.9 598 63.2
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 3.8e-223 778.5 598 64.0
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 4.9e-223 778.1 606 65.2
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 1.4e-222 776.5 539 72.0
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 1.9e-222 776.2 590 64.9
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.9e-222 776.2 597 64.0
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.5e-222 775.8 604 64.6
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 2.5e-222 775.8 607 64.6
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 4.2e-222 775.0 599 63.3
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 4.2e-222 775.0 606 65.0
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 7.1e-222 774.2 599 63.1
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 7.1e-222 774.2 599 64.3
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 7.9e-221 770.8 603 63.2
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.8e-220 769.6 600 64.7
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.3e-220 769.2 603 65.0
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 8.7e-220 767.3 598 65.1
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.5e-219 766.5 607 63.8
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.5e-219 765.8 576 64.4
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 2.5e-219 765.8 584 64.9
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 3.3e-219 765.4 599 62.6
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 3.3e-219 765.4 599 63.6
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 5.6e-219 764.6 603 63.5
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 7.4e-219 764.2 595 64.9
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 1.3e-218 763.5 599 62.4
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.1e-218 762.7 602 64.0
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 2.8e-218 762.3 598 63.5
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 3.1e-217 758.8 604 63.1
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 4.5e-216 755.0 603 62.4
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.3e-215 753.4 602 62.8
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 2.2e-215 752.7 606 63.4
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.9e-214 749.6 604 62.4
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.9e-214 749.6 607 61.4
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 6.0e-213 744.6 600 63.7
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.3e-212 743.4 606 62.0
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.5e-211 740.0 607 62.4
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 7.4e-211 737.6 602 62.0
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 9.7e-211 737.3 603 60.4
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 2.2e-210 736.1 603 60.5
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 4.8e-210 734.9 564 64.0
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 4.1e-209 731.9 602 61.5
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 5.3e-209 731.5 603 59.9
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 9.0e-209 730.7 602 61.3
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 1.5e-208 729.9 605 60.3
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 4.5e-208 728.4 609 61.4
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.7e-207 726.5 612 61.3
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 3.8e-207 725.3 603 60.9
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 4.2e-206 721.8 526 67.1
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.1e-205 719.5 598 62.5
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.4e-204 716.8 599 63.9
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.1e-203 713.8 607 60.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.3e-202 710.3 603 60.4
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 4.8e-202 708.4 597 60.3
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 8.2e-202 707.6 523 68.1
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 8.5e-199 697.6 602 58.8
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 1.1e-198 697.2 602 58.8
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 2.3e-196 689.5 600 58.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 9.7e-195 684.1 602 58.0
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 2.2e-194 682.9 602 57.8
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.2e-194 682.9 602 57.8
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.3e-193 678.3 602 57.8
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 7.0e-193 677.9 606 59.1
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 2.0e-192 676.4 589 59.3
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 8.5e-191 671.0 602 57.5
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.6e-189 665.6 602 57.5
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 5.9e-184 648.3 600 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 2.0e-179 633.3 622 53.9
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 3.4e-179 632.5 600 55.5
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 4.1e-177 625.5 602 53.8
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 2.5e-174 616.3 602 54.3
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 1.2e-173 614.0 597 54.3
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.7e-167 593.6 598 54.7
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 1.1e-161 574.3 470 62.1
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 7.8e-160 568.2 599 50.3
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 3.1e-148 529.6 733 43.9
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.1e-143 512.3 445 57.8
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 5.4e-129 465.7 396 62.9
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 7.6e-123 445.3 627 41.0
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 4.9e-122 442.6 457 48.8
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 4.3e-118 429.5 514 46.9
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.3e-117 427.9 318 66.4
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 1.4e-116 424.5 611 42.4
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-115 421.0 321 66.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.2e-113 413.3 359 61.3
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.3e-100 369.4 358 56.1
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 1.3e-93 348.2 324 58.6
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 2.5e-81 307.4 470 38.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.0e-74 285.4 493 38.3
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 5.2e-71 273.1 198 67.2
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 3.2e-65 253.8 184 68.5
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 9.4e-65 252.3 222 53.6
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.2e-58 231.1 162 67.3
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 6.1e-56 223.0 135 76.3
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 3.6e-48 197.2 380 37.1
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.3e-41 174.1 119 67.2
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 3.2e-36 157.5 122 63.1
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.7e-34 151.8 113 62.8
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 2.3e-34 151.4 113 62.8
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 6.6e-34 149.8 191 49.2
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.6e-32 145.2 101 72.3
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.7e-32 143.7 101 71.3
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 9.8e-30 136.0 76 78.9
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 3.2e-28 131.0 80 75.0
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.6e-27 128.6 191 42.9
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 6.0e-27 126.7 134 52.2
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 1.1e-23 115.9 188 43.1
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 2.3e-23 114.8 131 48.9
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 8.9e-23 112.8 83 67.5
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.1e-17 95.9 105 49.5
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 4.7e-16 90.5 82 54.9
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.8e-15 88.6 65 61.5
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 1.5e-14 85.5 56 69.6
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 7.6e-14 83.2 65 61.5
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 2.5e-09 68.2 41 75.6
Sc03g0007490 Simmondsia chinensis HOM05D004159 ORTHO05D388831 8.1e-08 63.2 97 39.2
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 2.4e-07 61.6 34 82.4
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.5e-06 58.9 35 68.6
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 9.9e-06 56.2 152 28.3


User provided reference genes

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