Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0378 Ceratophyllum demersum HOM05D001529 ORTHO05D024706 2.4e-66 255.4 128 100.0
MBI19_g06153_MAGBIO Magnolia biondii HOM05D001529 ORTHO05D007595 8.8e-37 157.1 117 70.1
Duzib138G1061 Durio zibethinus HOM05D001529 ORTHO05D007595 2.5e-36 155.6 117 71.8
Gohir.A07G167800 Gossypium hirsutum HOM05D001529 ORTHO05D007595 7.4e-36 154.1 114 71.9
Gorai.001G193700 Gossypium raimondii HOM05D001529 ORTHO05D007595 1.7e-35 152.9 114 71.1
TAR626G0907 Trochodendron aralioides HOM05D001529 ORTHO05D007595 2.2e-35 152.5 117 68.4
Medtr3g083180 Medicago truncatula HOM05D001529 ORTHO05D007595 3.7e-35 151.8 117 68.4
Psat5g104480 Pisum sativum HOM05D001529 ORTHO05D007595 6.3e-35 151.0 117 68.4
TPR.G19324 Trifolium pratense HOM05D001529 ORTHO05D007595 6.3e-35 151.0 117 67.5
Gohir.D07G173400 Gossypium hirsutum HOM05D001529 ORTHO05D007595 8.2e-35 150.6 113 70.8
Potri.014G162200 Populus trichocarpa HOM05D001529 ORTHO05D007595 8.2e-35 150.6 117 67.5
Ciclev10018290m.g Citrus clementina HOM05D001529 ORTHO05D007595 1.1e-34 150.2 117 66.7
DCAR_021112 Daucus carota HOM05D001529 ORTHO05D007595 1.4e-34 149.8 117 67.5
Nn1g03283 Nelumbo nucifera HOM05D001529 ORTHO05D007595 2.4e-34 149.1 117 68.4
Sabra14G0123900 Salix brachista HOM05D001529 ORTHO05D007595 3.1e-34 148.7 117 66.7
GSVIVG01030033001 Vitis vinifera HOM05D001529 ORTHO05D007595 3.1e-34 148.7 117 66.7
CiPaw.03G277800 Carya illinoinensis HOM05D001529 ORTHO05D007595 4.1e-34 148.3 117 67.5
Aa31sc53G50 Aethionema arabicum HOM05D001529 ORTHO05D007595 9.1e-34 147.1 117 64.1
Cpa.g.sc136.10 Carica papaya HOM05D001529 ORTHO05D007595 9.1e-34 147.1 117 67.5
Manes.12G062800 Manihot esculenta HOM05D001529 ORTHO05D007595 1.2e-33 146.7 117 64.1
Thecc.01G188800 Theobroma cacao HOM05D001529 ORTHO05D007595 1.2e-33 146.7 116 67.2
Eucgr.A01064 Eucalyptus grandis HOM05D001529 ORTHO05D007595 1.5e-33 146.4 117 68.4
Hma1.2p1_0405F.1_g145710 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 1.5e-33 146.4 117 67.5
Hma1.2p1_0405F.1_g145720 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 1.5e-33 146.4 117 67.5
Eucgr.A01066 Eucalyptus grandis HOM05D001529 ORTHO05D007595 2.0e-33 146.0 117 68.4
QL93p0116_0063 Quercus lobata HOM05D001529 ORTHO05D007595 2.0e-33 146.0 115 67.0
Hund24142 Selenicereus undatus HOM05D001529 ORTHO05D007595 2.0e-33 146.0 117 65.0
Sc20g0003910 Simmondsia chinensis HOM05D001529 ORTHO05D007595 2.0e-33 146.0 117 65.0
EL10Ac4g09205 Beta vulgaris HOM05D001529 ORTHO05D007595 2.6e-33 145.6 117 65.0
Haze_12706 Corylus avellana HOM05D001529 ORTHO05D007595 2.6e-33 145.6 114 67.5
Rhsim04G0043200 Rhododendron simsii HOM05D001529 ORTHO05D007595 2.6e-33 145.6 117 65.8
THA.LOC104815352 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 2.6e-33 145.6 117 66.7
A03p44470 Brassica napus HOM05D001529 ORTHO05D007595 3.4e-33 145.2 117 65.8
C03p55280 Brassica napus HOM05D001529 ORTHO05D007595 3.4e-33 145.2 117 65.8
BolC3t17800H Brassica oleracea HOM05D001529 ORTHO05D007595 3.4e-33 145.2 117 65.8
BraA03t13580Z Brassica rapa HOM05D001529 ORTHO05D007595 3.4e-33 145.2 117 65.8
Actinidia21451 Actinidia chinensis HOM05D001529 ORTHO05D007595 4.5e-33 144.8 117 66.7
Aqoxy4G02192 Aquilegia oxysepala HOM05D001529 ORTHO05D007595 4.5e-33 144.8 117 65.8
Lj1C790T8 Lonicera japonica HOM05D001529 ORTHO05D007595 5.9e-33 144.4 117 65.0
Phvul.009G238000 Phaseolus vulgaris HOM05D001529 ORTHO05D007595 5.9e-33 144.4 117 66.7
AL3G42430 Arabidopsis lyrata HOM05D001529 ORTHO05D007595 7.7e-33 144.1 117 65.0
Carub.0003s2643 Capsella rubella HOM05D001529 ORTHO05D007595 7.7e-33 144.1 117 65.0
CSS0013229 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 1.3e-32 143.3 117 64.1
Thhalv10002438m.g Eutrema salsugineum HOM05D001529 ORTHO05D007595 1.7e-32 142.9 117 64.1
Sp3g23420 Schrenkiella parvula HOM05D001529 ORTHO05D007595 1.7e-32 142.9 117 64.1
vmacro09386 Vaccinium macrocarpon HOM05D001529 ORTHO05D007595 1.7e-32 142.9 117 65.8
HanXRQChr10g0306381 Helianthus annuus HOM05D001529 ORTHO05D007595 2.2e-32 142.5 117 62.4
BcaB08g34492 Brassica carinata HOM05D001529 ORTHO05D007595 2.9e-32 142.1 117 65.0
Prupe.3G203100 Prunus persica HOM05D001529 ORTHO05D007595 2.9e-32 142.1 117 64.1
VMungo1080G0307 Vigna mungo HOM05D001529 ORTHO05D007595 2.9e-32 142.1 117 65.8
AT2G04842 Arabidopsis thaliana HOM05D001529 ORTHO05D007595 3.8e-32 141.7 117 64.1
Lj6g0006977 Lotus japonicus HOM05D001529 ORTHO05D007595 3.8e-32 141.7 117 65.0
AUR62000956 Chenopodium quinoa HOM05D001529 ORTHO05D007595 5.0e-32 141.4 117 64.1
Lalb_Chr14g0362561 Lupinus albus HOM05D001529 ORTHO05D007595 5.0e-32 141.4 117 64.1
TWI36G1606 Tripterygium wilfordii HOM05D001529 ORTHO05D007595 5.0e-32 141.4 117 65.8
AUR62005012 Chenopodium quinoa HOM05D001529 ORTHO05D007595 6.5e-32 141.0 117 64.1
Cc00_g04140 Coffea canephora HOM05D001529 ORTHO05D007595 6.5e-32 141.0 117 63.2
Migut.H01288 Erythranthe guttata HOM05D001529 ORTHO05D007595 6.5e-32 141.0 117 62.4
HPP92_022799 Vanilla planifolia HOM05D001529 ORTHO05D007595 6.5e-32 141.0 117 65.0
CARHR102830 Cardamine hirsuta HOM05D001529 ORTHO05D007595 1.1e-31 140.2 116 62.9
THA.LOC104826614 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 1.1e-31 140.2 117 64.1
Glyma.19G191200 Glycine max HOM05D001529 ORTHO05D007595 1.4e-31 139.8 117 65.8
MD09G1120400 Malus domestica HOM05D001529 ORTHO05D007595 1.4e-31 139.8 117 62.4
PGR042G1774 Punica granatum HOM05D001529 ORTHO05D007595 2.5e-31 139.0 117 64.1
Lsat_1_v5_gn_5_123180 Lactuca sativa HOM05D001529 ORTHO05D007595 3.2e-31 138.7 114 64.0
Ah.06g192740 Amaranthus hybridus HOM05D001529 ORTHO05D007595 5.5e-31 137.9 117 60.7
MSTRG.12244 Avicennia marina HOM05D001529 ORTHO05D007595 5.5e-31 137.9 114 64.0
arahy.Tifrunner.gnm1.ann1.TVN328 Arachis hypogaea HOM05D001529 ORTHO05D007595 7.2e-31 137.5 116 61.2
CsaV3_7G002750 Cucumis sativus L. HOM05D001529 ORTHO05D007595 7.2e-31 137.5 114 64.0
ECA234G3620 Erigeron canadensis HOM05D001529 ORTHO05D007595 7.2e-31 137.5 114 63.2
Os02g0538000 Oryza sativa ssp. japonica HOM05D001529 ORTHO05D007595 7.2e-31 137.5 115 59.1
PSO675G8054 Papaver somniferum HOM05D001529 ORTHO05D007595 7.2e-31 137.5 106 67.9
CANSAT64G0296 Cannabis sativa HOM05D001529 ORTHO05D007595 9.4e-31 137.1 117 60.7
Sed0023062 Sechium edule HOM05D001529 ORTHO05D007595 9.4e-31 137.1 117 62.4
Nitab4.5_0004215g0030 Nicotiana tabacum HOM05D001529 ORTHO05D007595 1.2e-30 136.7 117 65.0
Oeu064362.2 Olea europaea HOM05D001529 ORTHO05D007595 1.2e-30 136.7 114 64.9
Solyc07g048080.4 Solanum lycopersicum HOM05D001529 ORTHO05D007595 1.2e-30 136.7 117 63.2
Sopen07g024500 Solanum pennellii HOM05D001529 ORTHO05D007595 1.2e-30 136.7 117 63.2
PSO541G2760 Papaver somniferum HOM05D001529 ORTHO05D007595 1.6e-30 136.3 106 67.0
unitig_62.g23257 Utricularia gibba HOM05D001529 ORTHO05D007595 1.6e-30 136.3 117 64.1
arahy.Tifrunner.gnm1.ann1.6FNM9R Arachis hypogaea HOM05D001529 ORTHO05D007595 2.1e-30 136.0 116 61.2
arahy.Tifrunner.gnm1.ann1.9BA4YH Arachis hypogaea HOM05D001529 ORTHO05D007595 2.1e-30 136.0 116 61.2
Zm00001eb325920 Zea mays HOM05D001529 ORTHO05D007595 2.1e-30 136.0 117 57.3
RcHm_v2.0_Chr2g0156891 Rosa chinensis HOM05D001529 ORTHO05D007595 6.1e-30 134.4 117 62.4
ATR0712G164 Amborella trichopoda HOM05D001529 ORTHO05D007595 1.4e-29 133.3 117 60.7
FAN02G4258 Fragaria x ananassa HOM05D001529 ORTHO05D007595 1.8e-29 132.9 117 61.5
FAN09G3924 Fragaria x ananassa HOM05D001529 ORTHO05D024706 1.8e-29 132.9 117 61.5
ClCG02G002590 Citrullus lanatus HOM05D001529 ORTHO05D007595 6.7e-29 131.0 114 62.3
FvH4_6g41340 Fragaria vesca HOM05D001529 ORTHO05D007595 8.8e-29 130.6 117 60.7
FAN05G0710 Fragaria x ananassa HOM05D001529 ORTHO05D007595 2.0e-28 129.4 117 60.7
FAN14G1621 Fragaria x ananassa HOM05D001529 ORTHO05D007595 2.0e-28 129.4 117 60.7
CAN.G897.4 Capsicum annuum HOM05D001529 ORTHO05D007595 3.3e-28 128.6 117 62.4
CSS0024750 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D024706 1.3e-27 126.7 88 70.5
Rhsim04G0043300 Rhododendron simsii HOM05D001529 ORTHO05D024706 6.3e-27 124.4 85 72.9
Pp3c14_20630 Physcomitrium patens HOM05D001529 ORTHO05D007595 3.1e-26 122.1 109 60.6
PGSC0003DMG400006139 Solanum tuberosum HOM05D001529 ORTHO05D007595 1.2e-25 120.2 117 59.8
SGA_v2.0_scaffold49G18408 Striga asiatica HOM05D001529 ORTHO05D007595 5.9e-25 117.9 98 64.3
Mapoly0096s0034 Marchantia polymorpha HOM05D001529 ORTHO05D007595 1.7e-24 116.3 117 54.7
SEGI_09505 Sequoiadendron giganteum HOM05D001529 ORTHO05D007595 6.5e-24 114.4 114 53.5
COL.COLO4_10294 Corchorus olitorius HOM05D001529 ORTHO05D024706 1.9e-23 112.8 93 63.4
Pp3c2_11130 Physcomitrium patens HOM05D001529 ORTHO05D007595 5.5e-23 111.3 117 56.4
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 4.7e-22 108.2 100 57.0
Dinv07847 Davidia involucrata HOM05D001529 ORTHO05D007595 6.1e-22 107.8 86 68.6
CBR_g3851 Chara braunii HOM05D001529 ORTHO05D007595 2.6e-20 102.4 106 53.8
CDE04G2767 Ceratophyllum demersum HOM05D001529 ORTHO05D007595 5.7e-20 101.3 73 67.1
Peaxi162Scf02035g00017 Petunia axillaris HOM05D001529 ORTHO05D007595 1.2e-17 93.6 78 65.4
MD17G1111100 Malus domestica HOM05D001529 ORTHO05D007595 5.5e-15 84.7 73 61.6
PRCOL_00005026 Prasinoderma coloniale HOM05D001529 ORTHO05D007595 1.4e-13 80.1 109 41.3
CSS0037422 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 4.0e-13 78.6 114 49.1
CSS0041772 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 4.0e-13 78.6 114 49.1
MCO11G246 Micromonas commoda HOM05D001529 ORTHO05D007595 6.8e-13 77.8 109 41.3
Cre10.g421600 Chlamydomonas reinhardtii HOM05D001529 ORTHO05D007595 2.8e-11 72.4 117 38.5


User provided reference genes

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