Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 0.0e+00 1721.8 901 100.0
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 2.6e-244 849.4 995 51.8
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.4e-234 817.0 985 51.1
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.8e-232 810.1 985 50.7
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 3.1e-229 799.3 988 50.9
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 1.5e-220 770.4 995 49.0
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 2.9e-219 766.1 1005 48.3
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 1.8e-213 746.9 1006 47.4
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 4.2e-202 709.1 973 45.9
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 1.4e-200 704.1 970 46.5
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.8e-200 703.7 973 46.8
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 5.7e-199 698.7 968 47.2
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 3.1e-197 693.0 978 46.1
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 4.1e-197 692.6 953 45.8
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.0e-195 688.0 978 44.9
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 2.9e-195 686.4 974 45.7
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.4e-194 684.1 950 46.6
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 1.4e-194 684.1 974 46.7
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 1.6e-193 680.6 986 45.0
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.7e-193 679.9 969 46.3
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 3.6e-193 679.5 959 46.5
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 4.7e-193 679.1 983 45.1
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.3e-192 676.8 977 46.2
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.4e-189 667.5 999 44.8
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 1.6e-188 664.1 975 44.8
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.5e-188 662.5 989 44.9
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 7.7e-188 661.8 975 44.7
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 1.7e-187 660.6 954 46.0
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 8.5e-187 658.3 952 46.5
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.5e-186 657.5 975 44.3
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.2e-186 656.4 1019 43.8
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 4.2e-186 656.0 979 44.4
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 2.1e-185 653.7 906 46.6
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.3e-184 650.2 969 45.3
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 7.5e-183 645.2 1003 43.8
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 6.3e-182 642.1 960 44.7
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 3.1e-181 639.8 951 44.2
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 4.1e-181 639.4 960 44.4
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 1.2e-180 637.9 958 44.7
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 7.7e-180 635.2 956 44.4
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.7e-179 634.0 1013 43.7
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 2.9e-179 633.3 971 43.8
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 1.5e-178 630.9 975 43.4
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 1.9e-178 630.6 1019 42.4
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.6e-177 627.5 983 44.3
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 2.3e-176 623.6 954 43.4
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 3.0e-176 623.2 969 44.8
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 2.0e-175 620.5 954 43.1
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 2.0e-175 620.5 959 44.1
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 3.4e-175 619.8 960 42.7
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 8.3e-174 615.1 960 42.7
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 1.8e-173 614.0 963 42.8
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 1.2e-172 611.3 972 42.6
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 1.6e-172 610.9 960 42.4
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.6e-172 610.9 930 43.4
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 2.0e-172 610.5 962 42.9
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 2.9e-171 606.7 973 42.4
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 6.6e-171 605.5 975 42.4
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 1.1e-170 604.7 959 42.8
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 1.9e-170 604.0 974 42.8
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 4.2e-170 602.8 960 42.4
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 5.5e-170 602.4 932 43.8
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 2.3e-168 597.0 980 41.7
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 2.6e-167 593.6 1013 40.1
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 4.4e-167 592.8 969 42.2
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 5.7e-167 592.4 954 42.9
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 7.5e-167 592.0 978 41.4
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.1e-165 588.2 968 41.8
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 1.3e-163 581.3 968 41.3
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 5.0e-163 579.3 985 40.6
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 4.3e-162 576.2 965 41.2
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 1.2e-161 574.7 969 41.8
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 1.2e-161 574.7 947 42.2
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 1.6e-161 574.3 970 40.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.6e-161 574.3 971 41.1
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 2.8e-161 573.5 946 42.1
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 2.0e-159 567.4 950 42.0
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.4e-159 566.2 965 41.0
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.3e-158 564.7 951 41.0
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 4.9e-158 562.8 1003 40.0
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 8.3e-158 562.0 963 41.1
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 1.9e-157 560.8 969 41.1
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 4.1e-157 559.7 965 40.8
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 4.1e-157 559.7 979 39.9
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 2.3e-155 553.9 926 41.5
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 5.0e-155 552.7 968 40.0
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 1.1e-154 551.6 932 42.0
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 1.5e-154 551.2 986 40.0
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.6e-153 547.7 981 40.2
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 6.2e-153 545.8 922 41.9
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.8e-151 539.3 931 41.7
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 7.6e-135 485.7 504 53.4
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 7.1e-133 479.2 516 52.5
CDE04G0059 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 2.7e-132 477.2 333 79.9
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 3.9e-131 473.4 516 52.3
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 3.1e-128 463.8 810 40.6
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 5.3e-128 463.0 802 40.0
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 9.0e-128 462.2 945 37.8
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.2e-117 426.8 233 95.3
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 1.2e-111 408.7 494 48.0
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 1.6e-108 398.3 842 38.2
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 6.1e-100 369.8 518 45.8
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 1.9e-98 364.8 969 32.2
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 2.3e-83 314.7 517 41.2
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 9.7e-74 282.7 381 44.1
CDE04G2111 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.8e-73 280.4 217 72.4
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 7.7e-63 246.5 620 35.5
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.3e-57 229.2 384 42.7
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.3e-57 229.2 384 42.7
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 2.9e-54 218.0 864 26.6
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 1.2e-50 206.1 375 42.7
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 1.6e-47 195.7 512 33.6
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 4.3e-45 187.6 825 26.4
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 8.9e-43 179.9 826 24.9
Psat2g147520 Pisum sativum HOM05D001362 ORTHO05D001310 5.0e-38 164.1 137 57.7
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 1.1e-37 162.9 145 55.2
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 1.4e-35 156.0 138 59.4
Os03g0554900 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 4.0e-35 154.5 254 46.5
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 6.6e-30 137.1 109 62.4
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 2.1e-28 132.1 178 55.6
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 7.3e-21 107.1 90 61.1
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 1.1e-11 76.6 288 27.4
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 1.1e-11 76.6 60 61.7
Psat2g116240 Pisum sativum HOM05D004426 ORTHO05D005417 5.3e-11 74.3 169 35.5
Actinidia03883 Actinidia chinensis HOM05D004426 ORTHO05D005417 2.2e-09 68.9 88 46.6
Hund10805 Selenicereus undatus HOM05D001165 ORTHO05D000006 5.4e-08 64.3 67 52.2
Psat2g116200 Pisum sativum HOM05D004426 ORTHO05D005417 7.9e-07 60.5 90 45.6


User provided reference genes

Program Settings