Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1881 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 6.0e-77 290.8 151 100.0
CDE04G0840 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 6.0e-61 237.7 134 91.8
PSO478G2034 Papaver somniferum HOM05D000793 ORTHO05D000783 2.3e-28 129.4 133 56.4
GSVIVG01032542001 Vitis vinifera HOM05D000793 ORTHO05D000783 1.1e-27 127.1 137 53.3
Nn3g17015 Nelumbo nucifera HOM05D000793 ORTHO05D000783 1.5e-27 126.7 136 55.1
TAR629G1707 Trochodendron aralioides HOM05D000793 ORTHO05D000783 2.0e-27 126.3 136 55.9
SGA_v2.0_scaffold135G34834 Striga asiatica HOM05D000793 ORTHO05D000783 7.4e-27 124.4 121 56.2
BolC5t35144H Brassica oleracea HOM05D000793 ORTHO05D000783 2.2e-26 122.9 106 57.5
ATR0624G084 Amborella trichopoda HOM05D000793 ORTHO05D000783 6.3e-26 121.3 96 65.6
Haze_14624 Corylus avellana HOM05D000793 ORTHO05D000783 8.2e-26 120.9 126 52.4
BraA05t23195Z Brassica rapa HOM05D000793 ORTHO05D000783 1.1e-25 120.6 106 56.6
C09p75200 Brassica napus HOM05D000793 ORTHO05D000783 1.4e-25 120.2 106 56.6
MD17G1040600 Malus domestica HOM05D000793 ORTHO05D000783 3.1e-25 119.0 131 51.9
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 9.1e-25 117.5 159 45.3
A05p44610 Brassica napus HOM05D000793 ORTHO05D000783 1.2e-24 117.1 106 54.7
Carub.0003s0072 Capsella rubella HOM05D000793 ORTHO05D000783 1.2e-24 117.1 128 50.8
QL02p078191 Quercus lobata HOM05D000793 ORTHO05D000783 1.2e-24 117.1 126 50.0
Aa31LG5G10490 Aethionema arabicum HOM05D000793 ORTHO05D000783 1.5e-24 116.7 126 54.8
THA.LOC104821060 Tarenaya hassleriana HOM05D000793 ORTHO05D000783 1.5e-24 116.7 133 50.4
Hma1.2p1_0697F.1_g205060 Hydrangea macrophylla HOM05D000793 ORTHO05D000783 2.0e-24 116.3 144 50.0
Hma1.2p1_1975F.1_g309710 Hydrangea macrophylla HOM05D000793 ORTHO05D000783 2.0e-24 116.3 144 50.0
Lsat_1_v5_gn_0_16540 Lactuca sativa HOM05D000793 ORTHO05D000783 2.0e-24 116.3 113 53.1
CARHR075610 Cardamine hirsuta HOM05D000793 ORTHO05D000783 3.4e-24 115.5 131 51.1
SalBow1G7326 Salvia bowleyana HOM05D000793 ORTHO05D000783 3.4e-24 115.5 149 49.0
Thhalv10019986m.g Eutrema salsugineum HOM05D000793 ORTHO05D000783 4.5e-24 115.2 126 50.8
HanXRQChr15g0474401 Helianthus annuus HOM05D000793 ORTHO05D000783 4.5e-24 115.2 109 53.2
ClCG10G014560 Citrullus lanatus HOM05D000793 ORTHO05D000783 5.9e-24 114.8 143 50.3
FAN05G3418 Fragaria x ananassa HOM05D000793 ORTHO05D000783 5.9e-24 114.8 141 48.2
QL93p0205_0125 Quercus lobata HOM05D000793 ORTHO05D000783 7.7e-24 114.4 137 49.6
Prupe.3G278400 Prunus persica HOM05D000793 ORTHO05D000783 1.0e-23 114.0 121 55.4
BcaC05g30464 Brassica carinata HOM05D000793 ORTHO05D000783 1.3e-23 113.6 110 55.5
Cfa007473 Carpinus fangiana HOM05D000793 ORTHO05D000783 1.7e-23 113.2 128 50.0
PGSC0003DMG400001391 Solanum tuberosum HOM05D000793 ORTHO05D000783 2.9e-23 112.5 159 43.4
CSS0044382 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.8e-23 112.1 135 48.9
RcHm_v2.0_Chr2g0170301 Rosa chinensis HOM05D000793 ORTHO05D000783 3.8e-23 112.1 121 47.9
unitig_744.g24347 Utricularia gibba HOM05D000793 ORTHO05D000783 5.0e-23 111.7 121 49.6
FAN14G1704 Fragaria x ananassa HOM05D000793 ORTHO05D000783 6.5e-23 111.3 134 48.5
Aqoxy3G00884 Aquilegia oxysepala HOM05D000793 ORTHO05D000783 8.5e-23 110.9 138 51.4
CSS0007180 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 8.5e-23 110.9 135 48.1
Cpa.g.sc14.81 Carica papaya HOM05D000793 ORTHO05D000783 8.5e-23 110.9 136 50.0
Sed0002278 Sechium edule HOM05D000793 ORTHO05D000783 8.5e-23 110.9 111 55.0
Migut.H00160 Erythranthe guttata HOM05D000793 ORTHO05D000783 1.1e-22 110.5 147 47.6
AT3G01370 Arabidopsis thaliana HOM05D000793 ORTHO05D000783 1.9e-22 109.8 111 53.2
Cc07_g02650 Coffea canephora HOM05D000793 ORTHO05D000783 1.9e-22 109.8 149 45.6
AL3G10840 Arabidopsis lyrata HOM05D000793 ORTHO05D000783 2.5e-22 109.4 130 46.9
Sopen02g031990 Solanum pennellii HOM05D000793 ORTHO05D000783 2.5e-22 109.4 155 42.6
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 4.2e-22 108.6 103 58.3
Dinv33675 Davidia involucrata HOM05D000793 ORTHO05D000783 4.2e-22 108.6 153 48.4
Potri.001G350801 Populus trichocarpa HOM05D000793 ORTHO05D000783 4.2e-22 108.6 139 47.5
MELO3C009922.2 Cucumis melo HOM05D000793 ORTHO05D000783 7.2e-22 107.8 154 47.4
FAN09G4437 Fragaria x ananassa HOM05D000793 ORTHO05D000783 7.2e-22 107.8 127 47.2
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 9.4e-22 107.5 149 42.3
Gorai.006G027700 Gossypium raimondii HOM05D000793 ORTHO05D000783 9.4e-22 107.5 111 52.3
Gohir.A09G024400 Gossypium hirsutum HOM05D000793 ORTHO05D000783 2.1e-21 106.3 111 51.4
Gohir.D09G023600 Gossypium hirsutum HOM05D000793 ORTHO05D000783 2.1e-21 106.3 111 51.4
FvH4_6g50050 Fragaria vesca HOM05D000793 ORTHO05D000783 2.7e-21 105.9 137 46.0
PGR142G1623 Punica granatum HOM05D000793 ORTHO05D000783 4.7e-21 105.1 139 48.2
TWI12G1092 Tripterygium wilfordii HOM05D000793 ORTHO05D000783 6.1e-21 104.8 125 51.2
CsaV3_3G042020 Cucumis sativus L. HOM05D000793 ORTHO05D000783 7.9e-21 104.4 145 46.9
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 1.0e-20 104.0 141 45.4
Sc18g0000520 Simmondsia chinensis HOM05D000793 ORTHO05D000783 1.4e-20 103.6 154 44.8
EL10Ac8g18678 Beta vulgaris HOM05D000793 ORTHO05D000783 1.8e-20 103.2 101 48.5
CAN.G206.62 Capsicum annuum HOM05D000793 ORTHO05D000783 1.8e-20 103.2 148 43.9
Eucgr.I01877 Eucalyptus grandis HOM05D000793 ORTHO05D000783 1.8e-20 103.2 121 49.6
Ciclev10013715m.g Citrus clementina HOM05D000793 ORTHO05D000783 3.0e-20 102.4 150 42.7
AUR62011146 Chenopodium quinoa HOM05D000793 ORTHO05D000783 3.9e-20 102.1 110 50.9
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 3.9e-20 102.1 111 51.4
Nitab4.5_0007185g0050 Nicotiana tabacum HOM05D000793 ORTHO05D000783 6.7e-20 101.3 164 43.3
DCAR_001431 Daucus carota HOM05D000793 ORTHO05D000783 2.6e-19 99.4 98 48.0
Lj2g0022012 Lotus japonicus HOM05D000793 ORTHO05D000783 2.6e-19 99.4 124 46.0
AUR62013340 Chenopodium quinoa HOM05D000793 ORTHO05D000783 4.4e-19 98.6 105 49.5
Thecc.04G002900 Theobroma cacao HOM05D000793 ORTHO05D000783 4.4e-19 98.6 121 47.1
Ah.09g226400 Amaranthus hybridus HOM05D000793 ORTHO05D000783 7.4e-19 97.8 109 50.5
Hund26520 Selenicereus undatus HOM05D000793 ORTHO05D000783 2.8e-18 95.9 121 44.6
MBI14_g15140_MAGBIO Magnolia biondii HOM05D000793 ORTHO05D000783 1.8e-17 93.2 117 49.6
Actinidia06043 Actinidia chinensis HOM05D000793 ORTHO05D000783 3.1e-17 92.4 93 57.0
arahy.Tifrunner.gnm1.ann1.WN4T5U Arachis hypogaea HOM05D000793 ORTHO05D000783 4.5e-16 88.6 126 45.2
arahy.Tifrunner.gnm1.ann1.JVCB1P Arachis hypogaea HOM05D000793 ORTHO05D000783 1.0e-15 87.4 125 44.8
Lalb_Chr06g0176481 Lupinus albus HOM05D000793 ORTHO05D000783 1.0e-15 87.4 141 42.6
Psat1g079880 Pisum sativum HOM05D000793 ORTHO05D000783 2.9e-15 85.9 139 45.3
TPR.G31462 Trifolium pratense HOM05D000793 ORTHO05D000783 3.8e-15 85.5 141 44.0
RhsimUnG0168000 Rhododendron simsii HOM05D000793 ORTHO05D000783 5.5e-14 81.6 115 43.5
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 2.1e-13 79.7 53 77.4
VMungo0464G2076 Vigna mungo HOM05D000793 ORTHO05D000783 1.8e-12 76.6 112 47.3
Glyma.19G014100 Glycine max HOM05D000793 ORTHO05D000783 5.2e-12 75.1 136 43.4
Medtr6g008410 Medicago truncatula HOM05D000793 ORTHO05D000783 5.7e-11 71.6 145 40.0
Phvul.004G020800 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 1.4e-09 67.0 114 43.0
Ca_04228_v3 Cicer arietinum L. HOM05D000793 ORTHO05D000783 1.8e-09 66.6 64 54.7
Zm00001eb424430 Zea mays HOM05D000793 ORTHO05D000783 3.1e-09 65.9 104 37.5
Zm00001eb424440 Zea mays HOM05D000793 ORTHO05D000783 3.1e-09 65.9 104 37.5
vmacro05788 Vaccinium macrocarpon HOM05D000793 ORTHO05D000783 7.0e-09 64.7 96 42.7
Glyma.19G014000 Glycine max HOM05D000793 ORTHO05D000783 2.7e-08 62.8 79 48.1
Os04g0464800 Oryza sativa ssp. japonica HOM05D000793 ORTHO05D000783 1.0e-07 60.8 83 41.0


User provided reference genes

Program Settings