Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.3e-215 751.9 368 100.0
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 6.3e-96 355.1 426 47.9
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.0e-94 350.1 425 46.8
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 2.6e-94 349.7 415 48.2
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 5.0e-93 345.5 416 47.8
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 5.5e-92 342.0 414 47.1
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 5.5e-92 342.0 360 51.4
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 1.2e-91 340.9 421 45.4
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 1.2e-91 340.9 409 47.9
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 2.7e-91 339.7 437 45.8
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 1.0e-90 337.8 410 48.0
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 3.0e-90 336.3 415 47.0
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 6.7e-90 335.1 444 45.5
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 8.8e-90 334.7 418 45.9
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 2.6e-89 333.2 413 45.3
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 7.5e-89 331.6 365 50.1
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 2.4e-87 326.6 408 44.4
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 2.4e-87 326.6 435 44.8
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 2.4e-87 326.6 432 44.9
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 5.3e-87 325.5 411 46.0
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 5.3e-87 325.5 411 46.7
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.2e-86 324.3 411 47.0
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 1.2e-86 324.3 401 44.4
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 1.6e-86 323.9 428 43.9
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.6e-86 323.9 429 44.3
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.0e-86 323.6 408 45.1
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 5.9e-86 322.0 440 43.4
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 7.7e-86 321.6 413 45.0
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.0e-85 321.2 421 43.9
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.9e-85 319.7 414 45.2
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 2.9e-85 319.7 428 43.0
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 3.8e-85 319.3 412 45.1
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 5.0e-85 318.9 398 45.2
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 5.0e-85 318.9 399 44.6
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 6.5e-85 318.5 399 44.9
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 6.5e-85 318.5 425 44.7
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.9e-84 317.0 408 43.6
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 2.5e-84 316.6 428 42.3
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 7.2e-84 315.1 415 43.6
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.1e-83 313.5 407 43.0
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.7e-83 313.2 411 44.8
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.6e-83 312.8 399 43.6
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 1.4e-82 310.8 428 42.8
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.8e-82 310.5 431 42.9
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 3.0e-82 309.7 408 45.3
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 5.2e-82 308.9 415 43.4
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 1.2e-81 307.8 462 41.8
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 1.5e-81 307.4 418 42.3
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 3.4e-81 306.2 417 42.4
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 4.4e-81 305.8 411 42.1
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.7e-81 305.4 412 44.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 9.8e-81 304.7 443 44.5
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 6.3e-80 302.0 412 44.2
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 1.8e-79 300.4 397 44.1
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 2.4e-79 300.1 416 42.5
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 5.4e-79 298.9 411 43.8
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 9.1e-79 298.1 423 41.6
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 1.2e-78 297.7 407 44.5
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.2e-78 297.7 412 43.9
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 2.0e-78 297.0 419 43.2
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 2.7e-78 296.6 396 43.9
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.5e-78 295.8 409 43.3
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 5.9e-78 295.4 361 46.5
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 7.7e-78 295.0 432 41.9
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 1.3e-77 294.3 414 41.3
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 1.7e-77 293.9 447 38.7
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.8e-77 292.7 409 42.3
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 3.8e-77 292.7 425 41.6
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.1e-76 291.2 441 40.8
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.9e-76 290.4 346 46.0
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.5e-76 290.0 378 45.0
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 3.3e-76 289.7 424 41.0
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.3e-76 289.7 417 42.0
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 9.5e-76 288.1 411 42.3
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 1.2e-75 287.7 362 44.8
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.4e-74 284.3 432 39.8
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 4.0e-74 282.7 390 42.6
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.2e-73 281.2 423 40.0
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 5.7e-73 278.9 348 46.8
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 1.3e-72 277.7 367 43.6
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.3e-72 277.7 389 41.4
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 2.8e-72 276.6 361 44.0
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 2.8e-72 276.6 346 46.2
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 6.3e-72 275.4 438 38.6
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 5.6e-68 262.3 339 43.1
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 3.1e-66 256.5 350 42.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 5.2e-66 255.8 416 38.2
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 6.8e-66 255.4 357 44.3
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.2e-62 244.6 349 43.3
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 3.5e-62 243.0 433 38.1
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.7e-61 240.7 396 37.4
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 1.9e-60 237.3 337 43.6
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 2.1e-59 233.8 527 30.4
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.1e-58 231.5 320 41.9
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.1e-58 231.5 335 41.5
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 2.3e-58 230.3 374 39.8
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 2.3e-50 203.8 230 47.4
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 8.9e-50 201.8 308 39.9
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 1.2e-49 201.4 262 43.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 2.1e-46 190.7 264 43.9
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 2.1e-46 190.7 219 47.9
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 4.6e-46 189.5 221 47.1
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 4.6e-46 189.5 311 38.3
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 3.3e-44 183.3 258 39.9
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 5.6e-44 182.6 515 29.7
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 4.0e-42 176.4 317 39.1
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 9.9e-41 171.8 321 37.1
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 6.0e-38 162.5 243 41.6
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 6.0e-38 162.5 258 37.2
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.3e-36 156.4 230 43.9
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 9.6e-36 155.2 281 37.4
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.8e-35 153.7 179 48.6
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.4e-31 141.4 190 45.8
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 9.3e-31 138.7 402 29.1
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 6.0e-30 136.0 388 30.7
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 1.0e-29 135.2 149 47.7
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 3.0e-29 133.7 144 48.6
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 8.7e-29 132.1 145 47.6
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 3.3e-28 130.2 167 43.1
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 6.2e-27 125.9 238 38.7
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.5e-25 121.3 257 31.5
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 1.9e-23 114.4 104 54.8
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 5.4e-23 112.8 367 26.2
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 2.3e-21 107.5 428 26.6
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 1.1e-20 105.1 428 23.8
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 2.4e-18 97.4 109 49.5
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 9.0e-18 95.5 148 41.2
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 8.4e-16 89.0 81 56.8
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.2e-15 86.7 66 63.6
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 9.3e-15 85.5 85 55.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 6.0e-14 82.8 95 47.4
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 6.0e-14 82.8 97 42.3
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 4.0e-10 70.1 108 38.9
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 6.5e-08 62.8 110 37.3
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 8.4e-08 62.4 221 27.6
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 9.3e-07 58.9 32 75.0
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 1.6e-06 58.2 110 32.7


User provided reference genes

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