Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 3.7e-123 444.9 225 100.0
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 9.1e-106 387.1 220 90.9
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 5.4e-74 281.6 180 77.8
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 3.5e-73 278.9 228 64.0
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 2.8e-70 269.2 214 65.0
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 1.1e-69 267.3 168 78.0
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 3.1e-69 265.8 168 77.4
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 5.2e-69 265.0 176 73.9
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 5.2e-69 265.0 169 76.9
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 8.9e-69 264.2 171 74.9
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 2.0e-68 263.1 156 80.1
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 2.0e-68 263.1 156 80.1
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 2.6e-68 262.7 168 76.8
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 2.6e-68 262.7 156 80.1
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 4.4e-68 261.9 170 75.9
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 9.9e-68 260.8 156 80.8
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 1.3e-67 260.4 156 80.1
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.3e-67 260.4 156 80.1
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 1.7e-67 260.0 172 73.8
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 3.8e-67 258.8 156 81.4
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 3.8e-67 258.8 153 82.4
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 4.9e-67 258.5 158 79.1
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 6.4e-67 258.1 149 83.9
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 8.4e-67 257.7 156 78.8
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 1.4e-66 256.9 177 71.8
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.4e-66 256.9 155 78.7
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 2.4e-66 256.1 156 78.8
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 3.2e-66 255.8 161 76.4
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 4.2e-66 255.4 156 77.6
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 5.4e-66 255.0 167 74.3
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 7.1e-66 254.6 162 75.9
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 7.1e-66 254.6 161 75.8
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 9.3e-66 254.2 189 67.2
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 1.2e-65 253.8 155 78.7
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 1.6e-65 253.4 191 67.0
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 2.1e-65 253.1 158 77.2
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 4.6e-65 251.9 207 63.3
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 6.0e-65 251.5 155 77.4
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 6.0e-65 251.5 187 66.8
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 7.8e-65 251.1 183 68.3
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 1.0e-64 250.8 174 70.7
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 1.3e-64 250.4 154 77.3
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 1.3e-64 250.4 148 80.4
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 1.7e-64 250.0 187 66.3
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 1.7e-64 250.0 189 66.7
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 1.7e-64 250.0 152 78.9
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 2.3e-64 249.6 156 76.3
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.3e-64 249.6 156 75.6
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 2.3e-64 249.6 168 73.8
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 3.0e-64 249.2 224 60.3
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 3.9e-64 248.8 156 75.0
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.9e-64 248.8 156 75.0
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.9e-64 248.8 156 75.0
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 5.1e-64 248.4 165 75.8
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 5.1e-64 248.4 169 72.8
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 6.6e-64 248.1 163 73.6
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 1.1e-63 247.3 149 79.9
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.1e-63 247.3 150 79.3
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 1.1e-63 247.3 156 76.9
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 1.5e-63 246.9 149 79.9
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 1.5e-63 246.9 181 68.0
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 1.9e-63 246.5 154 76.0
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 1.9e-63 246.5 154 76.0
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 1.9e-63 246.5 154 76.0
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 4.3e-63 245.4 172 69.2
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 4.3e-63 245.4 153 75.2
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 7.3e-63 244.6 156 75.0
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 7.3e-63 244.6 144 81.9
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 9.6e-63 244.2 154 75.3
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 1.3e-62 243.8 177 67.2
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 1.3e-62 243.8 177 67.2
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 1.3e-62 243.8 177 67.2
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 1.3e-62 243.8 163 73.6
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 1.6e-62 243.4 165 70.9
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 1.6e-62 243.4 177 67.2
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 1.6e-62 243.4 156 74.4
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.1e-62 243.0 156 73.7
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 2.1e-62 243.0 186 65.6
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 2.1e-62 243.0 150 76.7
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 3.6e-62 242.3 158 72.2
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 3.6e-62 242.3 187 64.2
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 6.2e-62 241.5 149 80.5
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 1.1e-61 240.7 177 67.2
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 1.4e-61 240.4 177 66.7
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.4e-61 240.4 150 78.7
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 1.8e-61 240.0 156 73.7
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 2.4e-61 239.6 177 66.7
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 2.4e-61 239.6 177 66.7
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 3.1e-61 239.2 189 65.1
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 3.1e-61 239.2 153 73.2
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 4.0e-61 238.8 150 75.3
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 4.0e-61 238.8 169 69.2
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 1.2e-60 237.3 153 71.9
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 3.4e-60 235.7 159 73.0
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 1.7e-59 233.4 192 63.5
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 2.9e-59 232.6 151 72.8
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 3.8e-59 232.3 199 61.8
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 1.4e-58 230.3 227 55.5
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 9.3e-58 227.6 202 58.9
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 6.0e-57 224.9 198 59.6
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 1.7e-56 223.4 182 62.6
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 8.7e-56 221.1 155 68.4
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 2.5e-55 219.5 159 66.0
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 3.3e-55 219.2 145 71.7
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 4.8e-54 215.3 262 47.7
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 9.0e-53 211.1 141 73.0
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.1e-50 204.1 170 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 3.5e-49 199.1 145 62.1
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 8.7e-48 194.5 117 79.5
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.3e-46 190.7 117 79.5
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 2.5e-42 176.4 149 60.4
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 2.7e-41 172.9 144 61.8
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 1.1e-39 167.5 156 53.8
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 4.1e-37 159.1 138 60.1
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 4.1e-37 159.1 138 60.1
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 4.5e-36 155.6 87 82.8
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.3e-29 132.1 85 77.6
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 8.5e-27 124.8 114 49.1
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 2.5e-23 113.2 124 51.6
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 2.2e-22 110.2 114 45.6
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 4.8e-22 109.0 91 62.6
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 1.4e-21 107.5 131 41.2
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 5.9e-20 102.1 114 38.6
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 2.3e-16 90.1 89 56.2
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 2.7e-09 66.6 38 76.3
Cpa.g.sc10.49 Carica papaya HOM05D006308 ORTHO05D007820 3.0e-08 63.2 64 56.2
Zm00001eb317050 Zea mays HOM05D006308 ORTHO05D007820 4.0e-08 62.8 57 50.9
Actinidia07353 Actinidia chinensis HOM05D006308 ORTHO05D007820 4.4e-07 59.3 39 69.2
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 3.7e-06 56.2 130 27.7
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 8.2e-06 55.1 125 28.8
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 8.2e-06 55.1 103 33.0


User provided reference genes

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