Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 7.1e-83 310.8 192 100.0
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.9e-51 206.5 255 60.0
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 2.2e-28 129.8 106 66.0
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 8.0e-26 121.3 125 57.6
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 4.0e-25 119.0 106 61.3
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 6.8e-25 118.2 103 64.1
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 1.2e-24 117.5 103 65.0
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.2e-24 117.5 103 65.0
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 3.4e-24 115.9 106 60.4
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 4.4e-24 115.5 106 59.4
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.7e-24 115.2 103 64.1
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.7e-24 115.2 103 64.1
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 7.5e-24 114.8 122 54.1
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 9.8e-24 114.4 103 65.0
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 9.8e-24 114.4 106 61.3
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.3e-23 114.0 96 64.6
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 1.3e-23 114.0 106 61.3
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.3e-23 114.0 111 58.6
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 3.7e-23 112.5 110 61.8
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 3.7e-23 112.5 128 53.9
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 3.7e-23 112.5 106 59.4
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.7e-23 112.5 103 63.1
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 3.7e-23 112.5 106 61.3
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 6.3e-23 111.7 123 58.5
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 6.3e-23 111.7 114 58.8
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 6.3e-23 111.7 108 59.3
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 8.3e-23 111.3 128 52.3
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 8.3e-23 111.3 103 64.1
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 8.3e-23 111.3 118 55.1
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 8.3e-23 111.3 105 63.8
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 8.3e-23 111.3 105 63.8
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 1.1e-22 110.9 106 61.3
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.4e-22 110.5 103 63.1
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 1.4e-22 110.5 153 49.0
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 1.8e-22 110.2 141 53.9
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 2.4e-22 109.8 102 62.7
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 2.4e-22 109.8 103 63.1
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 2.4e-22 109.8 106 59.4
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 3.1e-22 109.4 113 56.6
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 7.0e-22 108.2 125 53.6
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 7.0e-22 108.2 103 61.2
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 7.0e-22 108.2 113 57.5
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 9.1e-22 107.8 152 49.3
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 9.1e-22 107.8 108 58.3
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.2e-21 107.5 152 49.3
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 1.2e-21 107.5 104 58.7
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 1.2e-21 107.5 96 64.6
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 1.2e-21 107.5 104 58.7
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 1.6e-21 107.1 102 62.7
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.6e-21 107.1 105 59.0
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 1.6e-21 107.1 105 58.1
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 2.0e-21 106.7 120 56.7
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.7e-21 106.3 150 48.7
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 2.7e-21 106.3 96 63.5
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 3.5e-21 105.9 96 63.5
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 4.5e-21 105.5 103 61.2
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 4.5e-21 105.5 103 61.2
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 4.5e-21 105.5 103 61.2
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 4.5e-21 105.5 103 61.2
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 4.5e-21 105.5 134 49.3
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 4.5e-21 105.5 150 46.7
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 5.9e-21 105.1 112 58.9
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.0e-20 104.4 103 61.2
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.0e-20 104.4 103 61.2
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.0e-20 104.4 103 61.2
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.0e-20 104.4 108 57.4
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.0e-20 104.4 108 57.4
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 1.0e-20 104.4 105 60.0
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.3e-20 104.0 105 60.0
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 1.3e-20 104.0 107 57.9
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.7e-20 103.6 103 60.2
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.3e-20 103.2 157 46.5
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 2.3e-20 103.2 155 47.7
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 2.3e-20 103.2 153 47.1
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 2.9e-20 102.8 153 47.1
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 2.9e-20 102.8 153 47.1
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 6.6e-20 101.7 102 60.8
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 6.6e-20 101.7 102 59.8
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 1.1e-19 100.9 152 42.8
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.5e-19 100.5 154 44.2
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 5.5e-19 98.6 118 52.5
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 9.5e-19 97.8 120 52.5
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.6e-18 97.1 106 53.8
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 1.6e-18 97.1 105 57.1
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 2.1e-18 96.7 93 61.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 2.1e-18 96.7 104 55.8
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.8e-18 96.3 152 45.4
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 4.7e-18 95.5 112 52.7
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 1.8e-17 93.6 124 48.4
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.8e-17 93.6 96 56.2
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 4.0e-17 92.4 149 45.6
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.2e-16 90.9 92 54.3
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 2.6e-16 89.7 105 52.4
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 4.4e-16 89.0 106 51.9
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.7e-15 87.0 151 44.4
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 2.2e-15 86.7 96 52.1
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 2.2e-15 86.7 206 35.0
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 4.9e-15 85.5 113 47.8
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.8e-14 83.6 103 55.3
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.4e-14 83.2 108 50.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.1e-14 82.8 95 43.2
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.1e-14 82.8 104 42.3
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 5.4e-14 82.0 102 53.9
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.4e-14 82.0 123 39.8
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.5e-13 79.0 122 39.3
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 1.3e-12 77.4 122 40.2
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 1.2e-10 70.9 108 43.5
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 1.2e-10 70.9 83 49.4
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.8e-10 69.7 92 39.1
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.8e-09 67.0 58 60.3
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.8e-09 65.1 77 39.0
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 2.2e-07 60.1 90 43.3
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 1.1e-06 57.8 106 40.6
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 7.0e-06 55.1 58 55.2


User provided reference genes

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