Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2347 Ceratophyllum demersum HOM05D003914 ORTHO05D001189 0.0e+00 1889.8 936 100.0
TAR625G0765 Trochodendron aralioides HOM05D003914 ORTHO05D001189 0.0e+00 1112.8 941 59.1
Nn5g28958 Nelumbo nucifera HOM05D003914 ORTHO05D001189 0.0e+00 1098.2 940 59.6
PSO447G0077 Papaver somniferum HOM05D003914 ORTHO05D001189 0.0e+00 1091.6 939 59.7
PSO210G6726 Papaver somniferum HOM05D003914 ORTHO05D001189 0.0e+00 1081.2 939 59.0
Rhsim08G0208100 Rhododendron simsii HOM05D003914 ORTHO05D001189 6.4e-312 1074.7 944 58.4
Dinv21395 Davidia involucrata HOM05D003914 ORTHO05D001189 2.0e-308 1062.4 944 57.6
Aqoxy7G03430 Aquilegia oxysepala HOM05D003914 ORTHO05D001189 1.9e-306 1055.8 940 57.1
Duzib235G0729 Durio zibethinus HOM05D003914 ORTHO05D001189 1.9e-306 1055.8 940 57.2
vmacro19039 Vaccinium macrocarpon HOM05D003914 ORTHO05D001189 3.2e-306 1055.0 944 57.0
COL.COLO4_26660 Corchorus olitorius HOM05D003914 ORTHO05D001189 1.8e-304 1049.3 942 56.7
MD08G1215300 Malus domestica HOM05D003914 ORTHO05D001189 1.2e-303 1046.6 940 56.5
RcHm_v2.0_Chr1g0336931 Rosa chinensis HOM05D003914 ORTHO05D001189 1.5e-303 1046.2 945 56.4
CSS0032385 Camellia sinensis var. sinensis HOM05D003914 ORTHO05D001189 2.0e-303 1045.8 944 56.9
Gorai.011G089200 Gossypium raimondii HOM05D003914 ORTHO05D001189 7.5e-303 1043.9 944 57.3
Gohir.D10G082300 Gossypium hirsutum HOM05D003914 ORTHO05D001189 9.8e-303 1043.5 944 57.2
MD15G1399200 Malus domestica HOM05D003914 ORTHO05D001189 1.3e-302 1043.1 942 56.4
FvH4_5g27200 Fragaria vesca HOM05D003914 ORTHO05D001189 2.2e-302 1042.3 942 56.2
FAN08G1096 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.4e-301 1039.6 941 55.9
Gohir.A10G069101 Gossypium hirsutum HOM05D003914 ORTHO05D001189 1.8e-301 1039.3 944 57.0
FAN13G1654 Fragaria x ananassa HOM05D003914 ORTHO05D001189 3.1e-301 1038.5 942 56.2
Thecc.06G038600 Theobroma cacao HOM05D003914 ORTHO05D001189 4.1e-301 1038.1 944 56.7
Cc04_g04890 Coffea canephora HOM05D003914 ORTHO05D001189 5.4e-301 1037.7 941 56.3
FAN18G0022 Fragaria x ananassa HOM05D003914 ORTHO05D001189 2.7e-300 1035.4 942 55.9
MBI05_g01294_MAGBIO Magnolia biondii HOM05D003914 ORTHO05D001189 2.9e-299 1031.9 838 60.9
Prupe.2G099100 Prunus persica HOM05D003914 ORTHO05D001189 2.9e-299 1031.9 945 56.3
QL05p034889 Quercus lobata HOM05D003914 ORTHO05D001189 8.6e-299 1030.4 946 55.8
Lj5A78T80 Lonicera japonica HOM05D003914 ORTHO05D001189 3.3e-298 1028.5 942 56.5
Ciclev10024784m.g Citrus clementina HOM05D003914 ORTHO05D001189 8.0e-297 1023.8 943 56.1
Oeu010367.1 Olea europaea HOM05D003914 ORTHO05D001189 2.0e-295 1019.2 945 55.2
Manes.04G104700 Manihot esculenta HOM05D003914 ORTHO05D001189 7.5e-295 1017.3 942 55.9
Cfa001895 Carpinus fangiana HOM05D003914 ORTHO05D001189 9.8e-295 1016.9 943 55.5
Eucgr.F03948 Eucalyptus grandis HOM05D003914 ORTHO05D001189 2.3e-291 1005.7 942 53.8
CANSAT56G3222 Cannabis sativa HOM05D003914 ORTHO05D001189 3.9e-291 1005.0 943 54.4
Sc26g0002670 Simmondsia chinensis HOM05D003914 ORTHO05D001189 9.5e-290 1000.3 947 54.0
Potri.003G180100 Populus trichocarpa HOM05D003914 ORTHO05D001189 6.2e-289 997.7 944 55.2
Phvul.008G287100 Phaseolus vulgaris HOM05D003914 ORTHO05D001189 1.0e-288 996.9 940 54.4
SGA_v2.0_scaffold5G02755 Striga asiatica HOM05D003914 ORTHO05D001189 8.9e-288 993.8 941 53.9
TWI12G1414 Tripterygium wilfordii HOM05D003914 ORTHO05D001189 1.5e-287 993.0 944 54.8
Glyma.14G005800 Glycine max HOM05D003914 ORTHO05D001189 3.7e-286 988.4 940 54.1
PGSC0003DMG400014195 Solanum tuberosum HOM05D003914 ORTHO05D001189 4.9e-286 988.0 946 53.9
VMungo0647G1679 Vigna mungo HOM05D003914 ORTHO05D001189 8.3e-286 987.3 940 54.1
LjContig00081g0020682 Lotus japonicus HOM05D003914 ORTHO05D001189 1.9e-285 986.1 938 53.7
DCAR_025582 Daucus carota HOM05D003914 ORTHO05D001189 4.1e-285 984.9 943 54.2
ClCG02G022560 Citrullus lanatus HOM05D003914 ORTHO05D001189 1.2e-284 983.4 946 54.7
Sopen03g036030 Solanum pennellii HOM05D003914 ORTHO05D001189 1.6e-284 983.0 946 54.1
CAN.G407.47 Capsicum annuum HOM05D003914 ORTHO05D001189 2.0e-284 982.6 946 53.8
Haze_16646 Corylus avellana HOM05D003914 ORTHO05D001189 3.3e-282 975.3 1048 50.1
THA.LOC104812443 Tarenaya hassleriana HOM05D003914 ORTHO05D001189 5.6e-282 974.5 936 54.1
Migut.I00709 Erythranthe guttata HOM05D003914 ORTHO05D001189 3.6e-281 971.8 942 53.2
Thhalv10018057m.g Eutrema salsugineum HOM05D003914 ORTHO05D001189 6.2e-281 971.1 942 54.2
PGR102G3368 Punica granatum HOM05D003914 ORTHO05D001189 3.1e-280 968.8 940 53.0
CiPaw.01G252800 Carya illinoinensis HOM05D003914 ORTHO05D001189 4.0e-280 968.4 942 54.4
EL10Ac3g05211 Beta vulgaris HOM05D003914 ORTHO05D001189 1.5e-279 966.5 949 52.8
arahy.Tifrunner.gnm1.ann1.E1J0LN Arachis hypogaea HOM05D003914 ORTHO05D001189 3.4e-279 965.3 939 52.9
Lalb_Chr04g0247201 Lupinus albus HOM05D003914 ORTHO05D001189 4.4e-279 964.9 945 54.0
MELO3C014532.2 Cucumis melo HOM05D003914 ORTHO05D001189 1.7e-278 963.0 949 53.5
TAR381G0623 Trochodendron aralioides HOM05D003914 ORTHO05D001189 2.9e-278 962.2 757 61.3
ATR0048G029 Amborella trichopoda HOM05D003914 ORTHO05D001189 3.7e-278 961.8 974 51.8
Carub.0002s2688 Capsella rubella HOM05D003914 ORTHO05D001189 3.7e-278 961.8 945 53.3
AL2G40760 Arabidopsis lyrata HOM05D003914 ORTHO05D001189 8.3e-278 960.7 938 53.7
Ah.02g130190 Amaranthus hybridus HOM05D003914 ORTHO05D001189 1.4e-277 959.9 974 52.1
AT1G80680 Arabidopsis thaliana HOM05D003914 ORTHO05D001189 1.4e-277 959.9 937 53.8
SalBow5G0986 Salvia bowleyana HOM05D003914 ORTHO05D001189 1.4e-277 959.9 942 53.1
SalBow5G5560 Salvia bowleyana HOM05D003914 ORTHO05D001189 1.4e-277 959.9 942 53.1
TPR.G15053 Trifolium pratense HOM05D003914 ORTHO05D001189 1.4e-277 959.9 937 53.8
arahy.Tifrunner.gnm1.ann1.39XWEQ Arachis hypogaea HOM05D003914 ORTHO05D001189 1.9e-277 959.5 939 52.6
Peaxi162Scf00332g00329 Petunia axillaris HOM05D003914 ORTHO05D001189 1.9e-277 959.5 944 53.6
SalBow7G0967 Salvia bowleyana HOM05D003914 ORTHO05D001189 3.2e-277 958.7 942 53.2
Ca_06471_v3 Cicer arietinum L. HOM05D003914 ORTHO05D001189 4.1e-277 958.4 952 52.8
Solyc03g117120.4 Solanum lycopersicum HOM05D003914 ORTHO05D001189 7.1e-277 957.6 946 53.3
BcaB05g25235 Brassica carinata HOM05D003914 ORTHO05D001189 9.2e-277 957.2 937 53.7
CsaV3_6G038690 Cucumis sativus L. HOM05D005551 ORTHO05D001189 6.0e-276 954.5 941 53.0
Zm00001eb402160 Zea mays HOM05D003914 ORTHO05D001189 7.8e-276 954.1 935 52.7
Aa31LG7G450 Aethionema arabicum HOM05D003914 ORTHO05D001189 1.7e-275 953.0 940 52.7
Medtr5g097890 Medicago truncatula HOM05D003914 ORTHO05D001189 5.1e-275 951.4 940 52.7
BcaC08g45332 Brassica carinata HOM05D003914 ORTHO05D001189 1.5e-274 949.9 935 52.8
A07p26790 Brassica napus HOM05D003914 ORTHO05D001189 2.5e-274 949.1 935 52.7
BraA07t30322Z Brassica rapa HOM05D003914 ORTHO05D001189 2.5e-274 949.1 935 52.7
Os03g0172000 Oryza sativa ssp. japonica HOM05D003914 ORTHO05D001189 2.5e-274 949.1 944 52.4
Sed0002099 Sechium edule HOM05D003914 ORTHO05D001189 4.3e-274 948.3 944 52.6
Sp5g35080 Schrenkiella parvula HOM05D003914 ORTHO05D001189 1.2e-273 946.8 944 52.8
C06p29420 Brassica napus HOM05D003914 ORTHO05D001189 3.6e-273 945.3 935 52.5
BolC6t38107H Brassica oleracea HOM05D003914 ORTHO05D001189 4.7e-273 944.9 935 52.5
A02p23230 Brassica napus HOM05D003914 ORTHO05D001189 1.4e-272 943.3 936 53.0
Nitab4.5_0011117g0010 Nicotiana tabacum HOM05D003914 ORTHO05D001189 2.3e-272 942.6 944 53.4
BcaB02g07257 Brassica carinata HOM05D003914 ORTHO05D001189 4.4e-271 938.3 940 52.2
ECA247G0583 Erigeron canadensis HOM05D003914 ORTHO05D001189 8.4e-270 934.1 945 53.2
HanXRQChr03g0080251 Helianthus annuus HOM05D003914 ORTHO05D001189 7.1e-269 931.0 943 52.8
Lsat_1_v5_gn_1_32000 Lactuca sativa HOM05D003914 ORTHO05D001189 1.2e-268 930.2 937 52.5
Nitab4.5_0001454g0080 Nicotiana tabacum HOM05D003914 ORTHO05D001189 7.3e-266 921.0 973 51.6
C02p36990 Brassica napus HOM05D003914 ORTHO05D001189 3.6e-265 918.7 916 52.6
AUR62019191 Chenopodium quinoa HOM05D003914 ORTHO05D001189 1.2e-263 913.7 921 51.6
SalBow5G1255 Salvia bowleyana HOM05D003914 ORTHO05D001189 2.3e-259 899.4 942 50.4
CARHR073840 Cardamine hirsuta HOM05D003914 ORTHO05D001189 5.4e-253 878.2 854 53.5
HanXRQChr02g0034961 Helianthus annuus HOM05D003914 ORTHO05D001189 1.2e-252 877.1 872 53.7
HanXRQChr08g0217431 Helianthus annuus HOM05D003914 ORTHO05D001189 3.7e-249 865.5 868 53.1
SEGI_18885 Sequoiadendron giganteum HOM05D003914 ORTHO05D001189 2.1e-236 823.2 996 46.7
Psat2g003960 Pisum sativum HOM05D003914 ORTHO05D001189 5.1e-235 818.5 786 53.9
HPP92_024673 Vanilla planifolia HOM05D003914 ORTHO05D001189 3.3e-218 762.7 940 45.3
SalBow5G5111 Salvia bowleyana HOM05D003914 ORTHO05D001189 1.5e-210 737.3 797 50.7
Mapoly0028s0046 Marchantia polymorpha HOM05D003914 ORTHO05D001189 2.7e-183 646.7 1003 38.6
Pp3c26_7720 Physcomitrium patens HOM05D003914 ORTHO05D001189 7.3e-181 638.6 1015 37.9
BraA02t07320Z Brassica rapa HOM05D003914 ORTHO05D001189 2.1e-180 637.1 552 57.8
AagrBONN_evm.TU.Sc2ySwM_340.72 Anthoceros agrestis HOM05D003914 ORTHO05D001189 1.3e-169 601.3 998 37.2
SMO367G0807 Selaginella moellendorffii HOM05D003914 ORTHO05D001189 1.1e-168 598.2 960 37.2
Oeu008404.1 Olea europaea HOM05D003914 ORTHO05D001189 4.1e-168 596.3 749 45.0
MD16G1257100 Malus domestica HOM05D003914 ORTHO05D001189 6.8e-155 552.4 675 45.3
Cpa.g.sc2.93 Carica papaya HOM05D003914 ORTHO05D001189 2.0e-154 550.8 469 58.0
AUR62026733 Chenopodium quinoa HOM05D003914 ORTHO05D001189 2.2e-137 494.2 499 49.9
unitig_61.g26230 Utricularia gibba HOM05D003914 ORTHO05D001189 1.4e-136 491.5 554 49.1
CBR_g34675 Chara braunii HOM05D003914 ORTHO05D001189 1.1e-123 448.7 1020 31.4
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.5e-117 428.3 464 51.7
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.1e-115 422.2 464 51.1
Actinidia28303 Actinidia chinensis HOM05D003914 ORTHO05D001189 3.9e-110 403.7 750 35.1
ATR0564G275 Amborella trichopoda HOM05D003914 ORTHO05D001189 8.8e-110 402.5 459 49.0
Zm00001eb242170 Zea mays HOM05D003914 ORTHO05D001189 1.0e-105 389.0 376 50.8
FAN15G1664 Fragaria x ananassa HOM05D003914 ORTHO05D001189 2.7e-103 380.9 400 51.2
Actinidia18235 Actinidia chinensis HOM05D003914 ORTHO05D001189 4.7e-103 380.2 377 51.5
AUR62013548 Chenopodium quinoa HOM05D003914 ORTHO05D001189 7.9e-103 379.4 624 35.7
FAN02G0445 Fragaria x ananassa HOM05D003914 ORTHO05D001189 3.0e-102 377.5 402 50.7
arahy.Tifrunner.gnm1.ann1.448EM4 Arachis hypogaea HOM05D003914 ORTHO05D001189 2.0e-101 374.8 321 56.7
FAN25G0399 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.4e-94 352.1 402 48.5
unitig_61.g26229 Utricularia gibba HOM05D003914 ORTHO05D001189 4.8e-92 343.6 322 51.6
FAN12G2419 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.7e-84 318.5 402 46.3
Actinidia25447 Actinidia chinensis HOM05D003914 ORTHO05D001189 8.5e-81 306.2 240 59.6
arahy.Tifrunner.gnm1.ann1.AIB04B Arachis hypogaea HOM05D003914 ORTHO05D001189 2.6e-69 268.1 359 40.9
Atru.chr10.2395 Acer truncatum HOM05D003914 ORTHO05D001189 1.3e-65 255.8 225 59.6
Zm00001eb206280 Zea mays HOM05D003914 ORTHO05D001189 3.9e-65 254.2 270 47.8
GSVIVG01017553001 Vitis vinifera HOM05D003914 ORTHO05D001189 1.0e-62 246.1 206 54.4
Zm00001eb072150 Zea mays HOM05D003914 ORTHO05D001189 5.6e-56 223.8 228 46.9
Zm00001eb037140 Zea mays HOM05D003914 ORTHO05D001189 9.5e-56 223.0 228 46.9
Zm00001eb104230 Zea mays HOM05D003914 ORTHO05D001189 1.2e-55 222.6 220 48.2
Zm00001eb336550 Zea mays HOM05D003914 ORTHO05D001189 1.3e-49 202.6 193 49.7
Zm00001eb075600 Zea mays HOM05D003914 ORTHO05D001189 8.6e-49 199.9 193 49.2
FAN15G0820 Fragaria x ananassa HOM05D000208 ORTHO05D000130 1.9e-43 182.2 254 44.9
Atru.chr10.2394 Acer truncatum HOM05D003914 ORTHO05D001189 7.3e-40 170.2 129 58.1
HPP92_024664 Vanilla planifolia HOM05D003914 ORTHO05D001189 2.8e-39 168.3 140 56.4
HanXRQChr02g0034921 Helianthus annuus HOM05D003914 ORTHO05D001189 7.8e-34 150.2 124 56.5
arahy.Tifrunner.gnm1.ann1.W0G0JC Arachis hypogaea HOM05D000229 ORTHO05D001189 1.1e-32 146.4 232 37.5
Zm00001eb386800 Zea mays HOM05D003914 ORTHO05D001189 3.3e-32 144.8 104 64.4
Nn1g04288 Nelumbo nucifera HOM05D003914 ORTHO05D001189 2.4e-30 138.7 113 54.9
SHI11253 Sapria himalayana HOM05D003914 ORTHO05D001189 9.0e-30 136.7 146 49.3
arahy.Tifrunner.gnm1.ann1.UV7GDF Arachis hypogaea HOM05D003914 ORTHO05D001189 7.6e-29 133.7 206 38.3
Zm00001eb052930 Zea mays HOM05D003914 ORTHO05D006988 6.4e-28 130.6 140 46.4
Zm00001eb059520 Zea mays HOM05D003914 ORTHO05D001189 1.4e-27 129.4 136 46.3
Zm00001eb421450 Zea mays HOM05D003914 ORTHO05D001189 1.4e-27 129.4 136 46.3
PRCOL_00003883 Prasinoderma coloniale HOM05D003914 ORTHO05D001189 1.9e-27 129.0 1065 22.5
TAR381G0103 Trochodendron aralioides HOM05D003914 ORTHO05D001189 7.8e-26 123.6 137 54.0
Cre02.g086887 Chlamydomonas reinhardtii HOM05D003914 ORTHO05D001189 1.5e-24 119.4 401 27.2
Atru.chr10.2396 Acer truncatum HOM05D003914 ORTHO05D001189 3.6e-23 114.8 92 57.6
Pp3c26_7670 Physcomitrium patens HOM05D003914 ORTHO05D001189 1.1e-22 113.2 150 37.3
Zm00001eb236280 Zea mays HOM05D003914 ORTHO05D001189 2.0e-21 109.0 136 41.9
VMungo0384G0001 Vigna mungo HOM05D003914 ORTHO05D001189 1.6e-18 99.4 126 45.2
ATR0564G390 Amborella trichopoda HOM05D003914 ORTHO05D001189 2.5e-16 92.0 147 40.1
CARHR073830 Cardamine hirsuta HOM05D003914 ORTHO05D001189 3.7e-15 88.2 101 46.5
Zm00001eb154890 Zea mays HOM05D003914 ORTHO05D001189 6.9e-14 84.0 108 39.8
Cfa026841 Carpinus fangiana HOM05D002142 ORTHO05D126159 3.4e-13 81.6 466 23.2
Zm00001eb386790 Zea mays HOM05D003914 ORTHO05D001189 5.8e-13 80.9 108 39.8
HanXRQChr02g0034941 Helianthus annuus HOM05D003914 ORTHO05D001189 2.2e-12 79.0 79 54.4
SalBow5G3025 Salvia bowleyana HOM05D003914 ORTHO05D001189 4.9e-12 77.8 109 39.4
Pp3c26_7680 Physcomitrium patens HOM05D002142 ORTHO05D001189 3.9e-09 68.2 182 33.0
Atru.chr10.2393 Acer truncatum HOM05D003914 ORTHO05D001189 6.2e-07 60.8 89 42.7


User provided reference genes

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