Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 2.4e-147 525.4 256 100.0
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.4e-78 297.0 246 59.3
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 2.4e-78 296.2 242 59.9
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 4.1e-78 295.4 234 62.4
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 5.4e-78 295.0 235 58.7
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 1.9e-75 286.6 243 58.4
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 2.5e-75 286.2 234 59.4
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 9.5e-75 284.3 231 60.6
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 1.2e-74 283.9 228 58.8
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 1.2e-74 283.9 230 60.0
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 1.6e-74 283.5 231 60.6
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 2.8e-74 282.7 243 58.8
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 8.0e-74 281.2 227 59.9
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 3.4e-72 275.8 227 58.1
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 5.8e-72 275.0 249 55.8
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 5.8e-72 275.0 244 57.0
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 5.8e-72 275.0 230 57.8
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 6.4e-71 271.6 244 56.6
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 8.3e-71 271.2 232 58.2
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 8.3e-71 271.2 227 58.6
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 1.4e-70 270.4 232 57.8
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 1.9e-70 270.0 246 56.1
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 3.2e-70 269.2 242 55.8
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 4.1e-70 268.9 243 56.8
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 9.2e-70 267.7 242 56.6
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 9.2e-70 267.7 235 56.6
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.2e-69 267.3 232 56.9
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 1.6e-69 266.9 245 52.2
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 3.5e-69 265.8 244 55.3
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 1.0e-68 264.2 229 56.8
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 3.0e-68 262.7 214 61.7
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 2.5e-67 259.6 244 53.3
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 3.3e-67 259.2 245 55.9
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 7.3e-67 258.1 233 53.6
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 2.1e-66 256.5 234 55.1
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 2.1e-66 256.5 233 54.1
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 2.1e-66 256.5 254 53.9
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 3.6e-66 255.8 233 53.6
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 3.6e-66 255.8 243 55.1
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 1.8e-65 253.4 233 53.2
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 8.9e-65 251.1 253 52.2
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 8.9e-65 251.1 224 57.6
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 1.5e-64 250.4 226 56.6
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 1.5e-64 250.4 233 51.9
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 2.6e-64 249.6 243 54.3
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 2.6e-64 249.6 242 52.9
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 2.6e-64 249.6 243 54.3
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 4.4e-64 248.8 233 52.8
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 9.9e-64 247.7 224 52.2
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 1.3e-63 247.3 226 54.9
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.7e-63 246.9 251 51.0
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 2.9e-63 246.1 226 54.4
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 3.2e-62 242.7 218 54.1
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 4.1e-62 242.3 230 52.6
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 7.1e-62 241.5 231 53.2
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 9.2e-62 241.1 209 57.4
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.2e-61 240.7 231 53.2
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 1.6e-61 240.4 236 53.4
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 2.1e-61 240.0 230 52.2
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 3.5e-61 239.2 225 54.7
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 4.6e-61 238.8 230 55.7
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 6.0e-61 238.4 233 53.2
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 7.8e-61 238.0 228 52.2
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 7.8e-61 238.0 204 57.8
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 1.0e-60 237.7 223 52.5
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 3.0e-60 236.1 227 50.7
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 5.1e-60 235.3 224 51.3
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 6.6e-60 235.0 229 52.4
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 2.5e-59 233.0 251 48.6
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 4.3e-59 232.3 234 52.1
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 3.6e-58 229.2 222 52.7
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 8.1e-58 228.0 206 54.4
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 1.8e-57 226.9 206 55.3
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 3.1e-57 226.1 229 49.8
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 4.0e-57 225.7 224 50.9
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 6.8e-57 224.9 224 50.9
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 1.5e-56 223.8 220 50.5
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 2.0e-56 223.4 225 49.8
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 2.0e-56 223.4 225 49.8
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 2.0e-56 223.4 233 47.2
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 5.8e-56 221.9 220 49.5
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 1.3e-55 220.7 242 47.9
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 8.4e-55 218.0 238 49.6
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 5.4e-54 215.3 199 56.8
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 5.4e-54 215.3 225 49.3
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 2.7e-53 213.0 213 53.5
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 1.3e-52 210.7 229 49.3
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 1.7e-52 210.3 199 55.8
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 3.9e-52 209.1 195 50.8
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 1.5e-51 207.2 249 43.8
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 1.9e-51 206.8 221 48.4
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 3.4e-48 196.1 198 51.0
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 3.4e-48 196.1 204 51.0
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 4.4e-48 195.7 254 42.5
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 9.9e-48 194.5 189 51.3
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 1.1e-46 191.0 227 45.4
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 6.0e-45 185.3 170 53.5
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 1.9e-43 180.3 171 53.2
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 7.3e-43 178.3 187 49.2
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 6.9e-41 171.8 197 46.7
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 6.9e-41 171.8 214 44.4
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 5.8e-40 168.7 163 50.9
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 2.2e-39 166.8 191 49.2
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 8.4e-39 164.9 142 54.9
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 5.4e-38 162.2 251 36.3
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 6.0e-37 158.7 140 57.9
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 6.0e-37 158.7 214 44.9
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 1.8e-36 157.1 160 50.6
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 1.5e-35 154.1 168 47.6
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 1.3e-34 151.0 255 36.5
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 3.8e-31 139.4 234 34.2
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 4.6e-29 132.5 213 40.4
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 4.6e-29 132.5 114 57.0
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 2.5e-27 126.7 111 56.8
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 1.1e-25 121.3 106 55.7
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 1.5e-24 117.5 120 47.5
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 3.4e-24 116.3 223 34.5
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 4.9e-23 112.5 113 49.6
TPR.G5312 Trifolium pratense HOM05D005876 ORTHO05D007326 4.9e-23 112.5 138 44.9
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 5.5e-22 109.0 109 50.5
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 8.7e-20 101.7 64 70.3
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 8.7e-20 101.7 64 70.3
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 5.7e-19 99.0 223 31.4
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 2.8e-18 96.7 81 56.8
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 6.9e-17 92.0 64 59.4
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 4.8e-10 69.3 141 32.6
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 6.3e-10 68.9 175 26.9


User provided reference genes

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