Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 3.8e-96 354.8 172 100.0
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 8.9e-77 290.4 172 76.7
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 2.4e-74 282.3 172 74.4
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 2.4e-74 282.3 169 75.7
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 9.2e-74 280.4 168 75.0
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 9.2e-74 280.4 168 73.8
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 2.7e-73 278.9 172 74.4
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 4.6e-73 278.1 168 74.4
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 2.3e-72 275.8 168 74.4
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 3.0e-72 275.4 167 73.1
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 3.0e-72 275.4 167 73.1
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 3.0e-72 275.4 169 72.8
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 1.1e-71 273.5 168 72.0
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 1.1e-71 273.5 168 70.8
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.5e-71 273.1 168 70.8
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 1.5e-71 273.1 168 71.4
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 1.5e-71 273.1 168 72.6
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 1.5e-71 273.1 167 71.9
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.9e-71 272.7 168 72.0
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 2.5e-71 272.3 168 70.2
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 4.3e-71 271.6 168 71.4
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 4.3e-71 271.6 168 69.6
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 7.3e-71 270.8 168 70.8
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 1.2e-70 270.0 172 68.6
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 2.1e-70 269.2 168 68.5
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 2.1e-70 269.2 168 69.6
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 2.8e-70 268.9 168 71.4
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 3.6e-70 268.5 168 70.2
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 4.7e-70 268.1 168 73.8
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 4.7e-70 268.1 168 71.4
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 1.1e-69 266.9 172 69.8
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 1.1e-69 266.9 168 71.4
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 1.4e-69 266.5 168 70.8
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 1.8e-69 266.2 168 73.2
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.3e-69 265.8 168 70.8
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 2.3e-69 265.8 168 69.0
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 5.2e-69 264.6 168 71.4
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 6.8e-69 264.2 168 70.2
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 1.5e-68 263.1 169 70.4
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 2.0e-68 262.7 168 68.5
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.6e-68 262.3 168 69.6
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 2.6e-68 262.3 168 69.6
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 3.4e-68 261.9 169 70.4
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 3.4e-68 261.9 168 69.6
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 3.4e-68 261.9 168 69.6
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 5.8e-68 261.2 167 69.5
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 9.9e-68 260.4 172 68.6
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.7e-67 259.6 178 66.9
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 2.2e-67 259.2 172 69.2
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 2.9e-67 258.8 168 67.9
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 6.4e-67 257.7 168 69.0
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 8.4e-67 257.3 168 63.7
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.1e-66 256.9 175 67.4
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.1e-66 256.9 175 67.4
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 1.9e-66 256.1 168 67.3
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 1.9e-66 256.1 168 67.3
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 4.1e-66 255.0 168 67.3
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 4.1e-66 255.0 166 71.7
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 5.4e-66 254.6 168 69.6
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 9.2e-66 253.8 171 66.1
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 1.2e-65 253.4 167 67.1
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 2.1e-65 252.7 166 68.7
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.0e-64 250.4 167 67.7
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 1.3e-64 250.0 167 67.7
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.3e-64 250.0 168 66.7
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 1.7e-64 249.6 167 67.1
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 1.7e-64 249.6 167 68.9
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 2.3e-64 249.2 167 67.7
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 3.9e-64 248.4 168 66.7
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 8.6e-64 247.3 167 67.7
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 8.6e-64 247.3 167 66.5
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 1.1e-63 246.9 164 66.5
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 1.9e-63 246.1 167 66.5
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 3.3e-63 245.4 167 65.9
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 5.6e-63 244.6 167 65.3
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 5.6e-63 244.6 167 65.3
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 2.8e-62 242.3 195 58.5
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 6.2e-62 241.1 235 51.5
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 2.4e-61 239.2 150 68.7
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 4.0e-61 238.4 168 64.3
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 6.9e-61 237.7 168 63.7
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 9.0e-61 237.3 168 61.3
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 1.2e-60 236.9 243 50.6
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 2.0e-60 236.1 169 62.7
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 2.6e-60 235.7 167 64.1
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 1.3e-59 233.4 148 72.3
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 1.3e-59 233.4 167 59.9
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 1.4e-58 229.9 147 67.3
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 7.8e-57 224.2 141 67.4
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 9.6e-55 217.2 136 71.3
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 3.1e-53 212.2 137 69.3
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 4.5e-52 208.4 279 41.9
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 2.3e-48 196.1 137 62.0
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 3.0e-48 195.7 167 55.7
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 6.2e-46 188.0 120 70.8
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 6.9e-45 184.5 117 69.2
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 3.4e-44 182.2 119 68.1
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 5.8e-44 181.4 170 47.1
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.6e-41 173.3 112 66.1
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 6.2e-38 161.4 166 47.6
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 8.2e-38 161.0 171 45.0
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 8.2e-38 161.0 117 64.1
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 1.5e-36 156.8 116 58.6
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 4.5e-36 155.2 167 44.9
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.9e-34 149.8 146 51.4
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 3.5e-33 145.6 88 71.6
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 4.6e-33 145.2 88 73.9
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 7.9e-33 144.4 152 48.7
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 8.7e-32 141.0 178 44.4
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 3.1e-21 105.9 66 69.7
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 1.0e-19 100.9 190 31.6
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 5.5e-18 95.1 78 59.0
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 7.2e-18 94.7 53 75.5
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 2.1e-17 93.2 53 77.4
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 1.4e-16 90.5 103 45.6
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 3.0e-16 89.4 55 65.5
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 8.8e-16 87.8 61 62.3
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 5.9e-12 75.1 159 34.0
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 4.2e-10 68.9 171 31.0
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 1.0e-08 64.3 229 27.9
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 3.0e-08 62.8 39 69.2
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 2.0e-07 60.1 38 78.9


User provided reference genes

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