Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0342 Ceratophyllum demersum HOM05D004755 ORTHO05D006137 3.1e-58 228.4 129 100.0
Nitab4.5_0004280g0140 Nicotiana tabacum HOM05D004755 ORTHO05D006137 1.7e-35 152.9 123 57.7
Nitab4.5_0004287g0030 Nicotiana tabacum HOM05D004755 ORTHO05D006137 1.7e-35 152.9 123 57.7
Hund06220 Selenicereus undatus HOM05D004755 ORTHO05D006137 5.4e-34 147.9 123 57.7
QL11p042321 Quercus lobata HOM05D004755 ORTHO05D006137 9.1e-34 147.1 123 56.1
Sabra04G0100200 Salix brachista HOM05D004755 ORTHO05D006137 2.7e-33 145.6 123 55.3
BcaC01g03670 Brassica carinata HOM05D004755 ORTHO05D006137 1.0e-32 143.7 123 53.7
ClCG02G005310 Citrullus lanatus HOM05D004755 ORTHO05D006137 1.7e-32 142.9 123 55.3
SalBow6G2421 Salvia bowleyana HOM05D004755 ORTHO05D006137 2.9e-32 142.1 123 54.5
MBI16_g13149_MAGBIO Magnolia biondii HOM05D004755 ORTHO05D006137 1.4e-29 133.3 104 59.6
Actinidia00497 Actinidia chinensis HOM05D004755 ORTHO05D006137 8.8e-29 130.6 104 57.7
Cc02_g17900 Coffea canephora HOM05D004755 ORTHO05D006137 4.4e-28 128.3 104 58.7
Dinv23556 Davidia involucrata HOM05D004755 ORTHO05D006137 7.5e-28 127.5 104 56.7
TAR628G0908 Trochodendron aralioides HOM05D004755 ORTHO05D006137 7.5e-28 127.5 104 57.7
Lj5A201G28 Lonicera japonica HOM05D004755 ORTHO05D006137 2.2e-27 125.9 104 55.8
Nn5g29490 Nelumbo nucifera HOM05D004755 ORTHO05D006137 2.2e-27 125.9 104 58.7
Oeu010556.1 Olea europaea HOM05D004755 ORTHO05D006137 3.7e-27 125.2 105 55.2
Rhsim11G0173300 Rhododendron simsii HOM05D004755 ORTHO05D006137 6.3e-27 124.4 104 56.7
CSS0003833 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.4e-26 123.2 104 55.8
CSS0019785 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.4e-26 123.2 104 55.8
GSVIVG01031913001 Vitis vinifera HOM05D004755 ORTHO05D006137 1.4e-26 123.2 104 55.8
DCAR_022097 Daucus carota HOM05D004755 ORTHO05D006137 1.8e-26 122.9 104 56.7
Hma1.2p1_0066F.1_g036750 Hydrangea macrophylla HOM05D004755 ORTHO05D006137 1.8e-26 122.9 104 54.8
THA.LOC104798811 Tarenaya hassleriana HOM05D004755 ORTHO05D006137 3.1e-26 122.1 104 53.8
Manes.17G099000 Manihot esculenta HOM05D004755 ORTHO05D006137 4.1e-26 121.7 104 55.8
Aqoxy5G01708 Aquilegia oxysepala HOM05D004755 ORTHO05D006137 5.4e-26 121.3 104 55.8
Ciclev10027868m.g Citrus clementina HOM05D004755 ORTHO05D006137 5.4e-26 121.3 104 54.8
RcHm_v2.0_Chr6g0262551 Rosa chinensis HOM05D004755 ORTHO05D006137 5.4e-26 121.3 104 54.8
vmacro02143 Vaccinium macrocarpon HOM05D004755 ORTHO05D006137 5.4e-26 121.3 105 54.3
TPR.G28052 Trifolium pratense HOM05D004755 ORTHO05D006137 7.0e-26 120.9 103 54.4
MD10G1082200 Malus domestica HOM05D004755 ORTHO05D006137 9.2e-26 120.6 104 54.8
CAN.G322.107 Capsicum annuum HOM05D004755 ORTHO05D006137 1.2e-25 120.2 104 53.8
Cfa004975 Carpinus fangiana HOM05D004755 ORTHO05D006137 1.2e-25 120.2 104 53.8
CiPaw.05G060900 Carya illinoinensis HOM05D004755 ORTHO05D006137 1.2e-25 120.2 104 52.9
FAN15G3513 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.2e-25 120.2 104 53.8
FAN20G2502 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.2e-25 120.2 104 53.8
FvH4_2g08030 Fragaria vesca HOM05D004755 ORTHO05D006137 1.6e-25 119.8 104 53.8
Lj3g0013592 Lotus japonicus HOM05D004755 ORTHO05D006137 2.7e-25 119.0 104 52.9
Lalb_Chr03g0025821 Lupinus albus HOM05D004755 ORTHO05D006137 2.7e-25 119.0 104 52.9
Psat7g185120 Pisum sativum HOM05D004755 ORTHO05D006137 2.7e-25 119.0 104 51.9
Atru.chr5.2935 Acer truncatum HOM05D004755 ORTHO05D006137 3.5e-25 118.6 104 55.8
Ca_20846_v3 Cicer arietinum L. HOM05D004755 ORTHO05D006137 3.5e-25 118.6 104 52.9
Haze_02419 Corylus avellana HOM05D004755 ORTHO05D006137 3.5e-25 118.6 104 52.9
Glyma.12G045800 Glycine max HOM05D004755 ORTHO05D006137 3.5e-25 118.6 104 52.9
Potri.004G150700 Populus trichocarpa HOM05D004755 ORTHO05D006137 3.5e-25 118.6 104 53.8
AL3G32250 Arabidopsis lyrata HOM05D004755 ORTHO05D006137 4.5e-25 118.2 104 52.9
Thhalv10020129m.g Eutrema salsugineum HOM05D004755 ORTHO05D006137 4.5e-25 118.2 104 51.0
FAN24G1877 Fragaria x ananassa HOM05D004755 ORTHO05D006137 4.5e-25 118.2 104 52.9
Thecc.02G121800 Theobroma cacao HOM05D004755 ORTHO05D006137 4.5e-25 118.2 103 54.4
Aa31LG8G5700 Aethionema arabicum HOM05D004755 ORTHO05D006137 5.9e-25 117.9 104 52.9
Medtr4g069090 Medicago truncatula HOM05D004755 ORTHO05D006137 5.9e-25 117.9 104 52.9
BcaB06g25940 Brassica carinata HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 51.9
A05p30690 Brassica napus HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 51.9
C05p46570 Brassica napus HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 51.9
BraA05t21911Z Brassica rapa HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 51.9
Migut.B00268 Erythranthe guttata HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 54.8
Lalb_Chr01g0002741 Lupinus albus HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 51.9
Peaxi162Scf00016g01034 Petunia axillaris HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 52.9
Prupe.8G104600 Prunus persica HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 52.9
Solyc01g109350.3 Solanum lycopersicum HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 53.8
Sopen01g051540 Solanum pennellii HOM05D004755 ORTHO05D006137 7.8e-25 117.5 104 53.8
BolC5t33386H Brassica oleracea HOM05D004755 ORTHO05D006137 1.0e-24 117.1 104 51.9
CARHR094310 Cardamine hirsuta HOM05D004755 ORTHO05D006137 1.0e-24 117.1 104 52.9
Carub.0003s1870 Capsella rubella HOM05D004755 ORTHO05D006137 1.3e-24 116.7 104 51.0
Glyma.11G120700 Glycine max HOM05D004755 ORTHO05D006137 1.3e-24 116.7 104 51.0
PSO700G0113 Papaver somniferum HOM05D004755 ORTHO05D006137 1.3e-24 116.7 104 62.5
unitig_746.g26712 Utricularia gibba HOM05D004755 ORTHO05D006137 1.3e-24 116.7 104 51.9
Potri.T125104 Populus trichocarpa HOM05D004755 ORTHO05D006137 1.7e-24 116.3 104 52.9
PGR142G0564 Punica granatum HOM05D004755 ORTHO05D006137 1.7e-24 116.3 104 51.9
Sabra09G0085600 Salix brachista HOM05D004755 ORTHO05D006137 1.7e-24 116.3 105 52.4
Gohir.D04G159300 Gossypium hirsutum HOM05D004755 ORTHO05D006137 2.3e-24 115.9 103 54.4
Potri.009G112184 Populus trichocarpa HOM05D004755 ORTHO05D006137 2.3e-24 115.9 104 52.9
Sp3g16960 Schrenkiella parvula HOM05D004755 ORTHO05D006137 2.3e-24 115.9 104 51.9
AT3G18860 Arabidopsis thaliana HOM05D004755 ORTHO05D006137 2.9e-24 115.5 104 51.0
Phvul.011G047700 Phaseolus vulgaris HOM05D004755 ORTHO05D006137 2.9e-24 115.5 104 50.0
Sc18g0004710 Simmondsia chinensis HOM05D004755 ORTHO05D006137 2.9e-24 115.5 104 52.9
COL.COLO4_32463 Corchorus olitorius HOM05D004755 ORTHO05D006137 3.8e-24 115.2 103 54.4
Eucgr.I01243 Eucalyptus grandis HOM05D004755 ORTHO05D006137 3.8e-24 115.2 104 52.9
arahy.Tifrunner.gnm1.ann1.A0G0F1 Arachis hypogaea HOM05D004755 ORTHO05D006137 5.0e-24 114.8 104 51.9
arahy.Tifrunner.gnm1.ann1.CRQ4KQ Arachis hypogaea HOM05D004755 ORTHO05D006137 5.0e-24 114.8 104 51.9
Gorai.012G146700 Gossypium raimondii HOM05D004755 ORTHO05D006137 6.6e-24 114.4 103 53.4
Sed0014712 Sechium edule HOM05D004755 ORTHO05D006137 6.6e-24 114.4 104 52.9
TWI75G0180 Tripterygium wilfordii HOM05D004755 ORTHO05D006137 6.6e-24 114.4 103 53.4
C03p49850 Brassica napus HOM05D004755 ORTHO05D006137 8.6e-24 114.0 104 50.0
BolC3t17278H Brassica oleracea HOM05D004755 ORTHO05D006137 8.6e-24 114.0 104 50.0
Gohir.A04G117600 Gossypium hirsutum HOM05D004755 ORTHO05D006137 1.1e-23 113.6 103 53.4
SMO146G0209 Selaginella moellendorffii HOM05D004755 ORTHO05D006137 1.1e-23 113.6 76 59.2
VMungo1127G1904 Vigna mungo HOM05D004755 ORTHO05D006137 1.1e-23 113.6 104 50.0
EL10Ac9g21762 Beta vulgaris HOM05D004755 ORTHO05D006137 2.5e-23 112.5 105 52.4
Duzib132G0528 Durio zibethinus HOM05D004755 ORTHO05D006137 2.5e-23 112.5 103 52.4
A03p40880 Brassica napus HOM05D004755 ORTHO05D006137 3.3e-23 112.1 103 48.5
BraA03t13246Z Brassica rapa HOM05D004755 ORTHO05D006137 3.3e-23 112.1 103 48.5
Cpa.g.sc62.108 Carica papaya HOM05D004755 ORTHO05D006137 2.1e-22 109.4 98 54.1
Os07g0123700 Oryza sativa ssp. japonica HOM05D004755 ORTHO05D006137 3.6e-22 108.6 104 51.0
Ah.01g006160 Amaranthus hybridus HOM05D004755 ORTHO05D006137 4.7e-22 108.2 104 51.9
AUR62016701 Chenopodium quinoa HOM05D004755 ORTHO05D006137 1.0e-21 107.1 104 50.0
AUR62011360 Chenopodium quinoa HOM05D004755 ORTHO05D006137 2.3e-21 105.9 104 49.0
Zm00001eb299230 Zea mays HOM05D004755 ORTHO05D006137 3.0e-21 105.5 104 47.1
AagrBONN_evm.TU.Sc2ySwM_368.805 Anthoceros agrestis HOM05D004755 ORTHO05D006137 1.4e-18 96.7 59 67.8
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-18 95.9 59 76.3
AagrBONN_evm.TU.Sc2ySwM_368.721 Anthoceros agrestis HOM05D004755 ORTHO05D006137 4.6e-17 91.7 99 42.4
Lsat_1_v5_gn_9_109321 Lactuca sativa HOM05D004755 ORTHO05D006137 2.3e-16 89.4 104 59.6
SHI05426 Sapria himalayana HOM05D004755 ORTHO05D006137 3.9e-16 88.6 105 44.8
HanXRQChr08g0216571 Helianthus annuus HOM05D004755 ORTHO05D006137 9.5e-15 84.0 104 59.6
PSO170G5490 Papaver somniferum HOM05D004755 ORTHO05D006137 4.7e-14 81.6 104 58.7
CsaV3_2G000030 Cucumis sativus L. HOM05D004755 ORTHO05D006137 6.2e-14 81.3 51 74.5
ECA240G4701 Erigeron canadensis HOM05D004755 ORTHO05D006137 8.0e-14 80.9 104 57.7
SGA_v2.0_scaffold58G20570 Striga asiatica HOM05D004755 ORTHO05D006137 1.1e-13 80.5 104 38.5
CARHR099950 Cardamine hirsuta HOM05D004755 ORTHO05D006137 3.1e-13 79.0 59 62.7
Gorai.007G229200 Gossypium raimondii HOM05D004755 ORTHO05D036105 5.2e-13 78.2 57 66.7
Gohir.A11G209850 Gossypium hirsutum HOM05D004755 ORTHO05D036105 1.5e-12 76.6 57 64.9
Pp3c13_21390 Physcomitrium patens HOM05D004755 ORTHO05D006137 2.0e-12 76.3 49 67.3
Gohir.D11G213250 Gossypium hirsutum HOM05D004755 ORTHO05D036105 5.8e-12 74.7 57 64.9
Cfa023312 Carpinus fangiana HOM05D004755 ORTHO05D006137 1.3e-11 73.6 73 47.9
Mapoly0131s0025 Marchantia polymorpha HOM05D004755 ORTHO05D006137 1.2e-09 67.0 44 63.6
ATR0733G059 Amborella trichopoda HOM05D004755 ORTHO05D006137 2.0e-09 66.2 99 33.3
MELO3C018404.2 Cucumis melo HOM05D004755 ORTHO05D006137 4.6e-09 65.1 104 33.7
Rhsim12G0078300 Rhododendron simsii HOM05D004755 ORTHO05D006137 1.3e-08 63.5 110 37.3
CsaV3_7G010210 Cucumis sativus L. HOM05D004755 ORTHO05D006137 5.0e-08 61.6 104 32.7
SEGI_27412 Sequoiadendron giganteum HOM05D004755 ORTHO05D006137 1.1e-07 60.5 64 43.8
SEGI_07035 Sequoiadendron giganteum HOM05D004755 ORTHO05D014145 1.9e-07 59.7 40 62.5
Cre09.g389912 Chlamydomonas reinhardtii HOM05D004755 ORTHO05D006137 3.3e-07 58.9 63 46.0


User provided reference genes

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