Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3616 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 7.0e-273 943.3 473 100.0
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 7.3e-97 358.6 392 49.5
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 7.3e-97 358.6 386 52.3
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 2.4e-87 327.0 388 48.5
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 2.4e-87 327.0 385 48.6
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 3.1e-87 326.6 380 48.7
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 3.1e-87 326.6 385 46.0
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 4.5e-86 322.8 387 48.1
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 3.8e-85 319.7 398 45.2
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 3.2e-84 316.6 385 45.2
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 1.2e-83 314.7 385 46.8
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 2.1e-83 313.9 390 46.2
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 4.6e-83 312.8 390 47.2
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 7.9e-83 312.0 389 46.0
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 6.7e-82 308.9 388 46.1
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 6.7e-82 308.9 388 46.4
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 1.1e-81 308.1 385 44.7
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 9.6e-81 305.1 391 44.0
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 2.1e-80 303.9 385 45.2
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 2.8e-80 303.5 385 45.2
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 3.7e-80 303.1 388 45.1
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 3.7e-80 303.1 384 46.1
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 4.8e-80 302.8 388 45.1
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 8.1e-80 302.0 384 45.3
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 1.4e-79 301.2 387 44.4
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.4e-79 300.4 384 45.3
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.4e-79 300.4 384 45.3
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 3.1e-79 300.1 385 44.7
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 4.0e-79 299.7 390 45.1
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 4.0e-79 299.7 388 42.5
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 5.3e-79 299.3 384 45.1
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 1.2e-78 298.1 388 46.1
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.5e-78 297.7 394 43.7
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 4.5e-78 296.2 385 43.1
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.8e-78 295.8 379 43.8
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.3e-77 294.7 379 44.1
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.3e-77 294.7 379 44.9
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 2.9e-77 293.5 387 44.7
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.9e-77 293.5 379 43.5
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 3.8e-77 293.1 391 43.7
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 3.8e-77 293.1 397 44.6
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 6.4e-77 292.4 379 43.8
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 1.1e-76 291.6 383 41.8
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 1.4e-76 291.2 384 42.7
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 1.4e-76 291.2 384 43.8
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 1.9e-76 290.8 387 43.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 1.9e-76 290.8 385 42.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 2.4e-76 290.4 395 42.3
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 4.2e-76 289.7 389 43.4
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.1e-76 288.9 377 43.5
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 9.3e-76 288.5 379 43.0
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 9.3e-76 288.5 387 44.7
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 1.2e-75 288.1 386 43.5
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.6e-75 287.7 388 44.3
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.6e-75 287.7 388 44.6
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 4.6e-75 286.2 386 43.0
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 6.0e-75 285.8 386 41.7
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 1.0e-74 285.0 379 44.3
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 1.3e-74 284.6 385 41.6
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 5.1e-74 282.7 385 40.3
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 1.1e-73 281.6 385 40.3
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 5.6e-73 279.3 426 40.6
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 7.4e-73 278.9 383 41.5
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 7.4e-73 278.9 384 41.7
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 9.6e-73 278.5 390 41.8
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.3e-72 278.1 382 41.4
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 1.3e-72 278.1 382 41.4
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 3.7e-72 276.6 386 43.5
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 8.2e-72 275.4 383 40.7
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 1.4e-71 274.6 387 41.1
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 2.4e-71 273.9 379 41.4
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 4.0e-71 273.1 387 41.1
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 5.3e-71 272.7 378 41.0
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 9.0e-71 271.9 383 41.0
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 9.0e-71 271.9 382 38.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.5e-70 271.2 385 40.3
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 1.5e-70 271.2 390 43.3
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 2.0e-70 270.8 383 41.3
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 7.6e-70 268.9 385 40.8
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.0e-69 268.5 383 39.9
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 1.7e-69 267.7 382 38.5
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.2e-69 267.3 382 39.3
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 2.2e-69 267.3 385 40.3
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 3.8e-69 266.5 384 39.6
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 4.9e-69 266.2 387 39.8
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 1.1e-68 265.0 385 39.7
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 3.2e-68 263.5 385 40.0
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.0e-66 258.5 381 40.2
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.3e-64 251.5 386 41.5
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.8e-64 250.4 382 36.4
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 5.9e-62 242.7 383 37.9
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 1.4e-58 231.5 380 39.2
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 1.5e-57 228.0 348 41.4
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 8.2e-56 222.2 276 44.9
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.8e-55 221.1 272 44.1
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 3.6e-51 206.8 365 36.7
Psat0s2215g0200 Pisum sativum HOM05D004426 ORTHO05D005417 1.8e-50 204.5 332 37.7
Psat6g150080 Pisum sativum HOM05D004426 ORTHO05D005417 2.0e-46 191.0 326 37.7
MBI03_g28305_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 3.6e-35 153.7 188 47.3
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 1.2e-33 148.7 331 31.7
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.3e-29 135.2 400 26.0
Psat0s2215g0120 Pisum sativum HOM05D004426 ORTHO05D005417 6.5e-29 132.9 115 55.7
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 5.2e-26 123.2 172 40.1
CDE07G0146 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.0e-21 109.0 61 83.6
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 3.8e-21 107.1 189 36.5
Actinidia03882 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.3e-13 82.0 72 58.3
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 6.1e-11 73.2 64 60.9
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 1.9e-07 61.6 157 28.0


User provided reference genes

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