Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3347 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 1.1e-113 413.3 210 100.0
CDE02G0088 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 1.6e-96 356.3 185 96.2
TAR628G1576 Trochodendron aralioides HOM05D006781 ORTHO05D008500 2.5e-65 252.7 195 69.2
TAR628G1642 Trochodendron aralioides HOM05D006781 ORTHO05D008500 2.5e-65 252.7 195 69.2
ECA232G4265 Erigeron canadensis HOM05D000595 ORTHO05D001274 4.3e-65 251.9 191 70.2
Migut.H01003 Erythranthe guttata HOM05D006781 ORTHO05D008500 2.8e-64 249.2 192 70.8
MBI16_g37743_MAGBIO Magnolia biondii HOM05D006781 ORTHO05D008500 2.8e-64 249.2 203 66.0
Lsat_1_v5_gn_4_150821 Lactuca sativa HOM05D006781 ORTHO05D008500 4.7e-64 248.4 204 66.2
MSTRG.23537 Avicennia marina HOM05D006781 ORTHO05D008500 8.1e-64 247.7 192 69.3
SGA_v2.0_scaffold276G46640 Striga asiatica HOM05D006781 ORTHO05D008500 8.1e-64 247.7 193 69.4
SalBow1G4613 Salvia bowleyana HOM05D006781 ORTHO05D008500 1.1e-63 247.3 191 69.6
HanXRQChr02g0054021 Helianthus annuus HOM05D006781 ORTHO05D008500 2.4e-63 246.1 193 68.4
Cc07_g09330 Coffea canephora HOM05D006781 ORTHO05D008500 8.9e-63 244.2 200 66.5
HPP92_024892 Vanilla planifolia HOM05D006781 ORTHO05D008500 2.0e-62 243.0 188 68.1
Lj4A199T79 Lonicera japonica HOM05D006781 ORTHO05D008500 5.8e-62 241.5 189 69.8
Sp7g34310 Schrenkiella parvula HOM05D006781 ORTHO05D008500 7.6e-62 241.1 192 69.3
Thhalv10024972m.g Eutrema salsugineum HOM05D006781 ORTHO05D008500 9.9e-62 240.7 192 69.8
AL7G14360 Arabidopsis lyrata HOM05D006781 ORTHO05D008500 1.3e-61 240.4 192 68.8
AT4G36650 Arabidopsis thaliana HOM05D006781 ORTHO05D008500 2.2e-61 239.6 192 68.8
CARHR244990 Cardamine hirsuta HOM05D006781 ORTHO05D008500 3.8e-61 238.8 193 68.9
Duzib187G0625 Durio zibethinus HOM05D006781 ORTHO05D008500 8.4e-61 237.7 193 68.4
A03p64390 Brassica napus HOM05D006781 ORTHO05D008500 1.4e-60 236.9 190 68.9
BraA03t15504Z Brassica rapa HOM05D006781 ORTHO05D008500 1.4e-60 236.9 190 68.9
COL.COLO4_22101 Corchorus olitorius HOM05D006781 ORTHO05D008500 1.4e-60 236.9 192 67.2
Gohir.D11G191800 Gossypium hirsutum HOM05D006781 ORTHO05D008500 1.4e-60 236.9 193 67.4
unitig_52.g17586 Utricularia gibba HOM05D006781 ORTHO05D008500 1.4e-60 236.9 192 68.2
BcaNung04429 Brassica carinata HOM05D006781 ORTHO05D008500 1.9e-60 236.5 200 67.5
Carub.0007s0367 Capsella rubella HOM05D006781 ORTHO05D008500 1.9e-60 236.5 192 68.2
BolC7t46605H Brassica oleracea HOM05D006781 ORTHO05D008500 2.4e-60 236.1 190 68.9
DCAR_017258 Daucus carota HOM05D006781 ORTHO05D008500 4.2e-60 235.3 187 68.4
Oeu024876.1 Olea europaea HOM05D006781 ORTHO05D008500 4.2e-60 235.3 192 66.7
Thecc.01G038000 Theobroma cacao HOM05D006781 ORTHO05D008500 4.2e-60 235.3 192 66.7
Aa31LG6G13450 Aethionema arabicum HOM05D006781 ORTHO05D008500 5.4e-60 235.0 192 68.2
Potri.007G027600 Populus trichocarpa HOM05D006781 ORTHO05D008500 7.1e-60 234.6 190 67.4
Dinv26821 Davidia involucrata HOM05D006781 ORTHO05D008500 9.3e-60 234.2 199 64.3
Gorai.007G204500 Gossypium raimondii HOM05D006781 ORTHO05D008500 9.3e-60 234.2 193 66.8
Manes.02G092200 Manihot esculenta HOM05D006781 ORTHO05D008500 9.3e-60 234.2 189 67.2
RcHm_v2.0_Chr2g0101921 Rosa chinensis HOM05D006781 ORTHO05D008500 1.2e-59 233.8 192 67.2
THA.LOC104807446 Tarenaya hassleriana HOM05D006781 ORTHO05D008500 1.2e-59 233.8 194 66.5
C07p61830 Brassica napus HOM05D006781 ORTHO05D008500 1.6e-59 233.4 191 68.1
Medtr5g019910 Medicago truncatula HOM05D006781 ORTHO05D008500 1.6e-59 233.4 196 63.8
Nn1g08488 Nelumbo nucifera HOM05D006781 ORTHO05D008500 2.7e-59 232.6 197 66.5
Aqoxy6G01071 Aquilegia oxysepala HOM05D006781 ORTHO05D008500 3.5e-59 232.3 209 62.2
AUR62003169 Chenopodium quinoa HOM05D006781 ORTHO05D008500 3.5e-59 232.3 191 65.4
Prupe.7G152500 Prunus persica HOM05D006781 ORTHO05D008500 3.5e-59 232.3 195 66.7
CSS0005063 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 4.6e-59 231.9 205 63.4
CSS0044143 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 4.6e-59 231.9 205 63.4
Haze_15109 Corylus avellana HOM05D006781 ORTHO05D008500 4.6e-59 231.9 191 66.5
Cfa004291 Carpinus fangiana HOM05D006781 ORTHO05D008500 6.0e-59 231.5 191 66.5
Gohir.A11G185300 Gossypium hirsutum HOM05D006781 ORTHO05D008500 7.8e-59 231.1 193 65.8
AUR62007987 Chenopodium quinoa HOM05D006781 ORTHO05D008500 1.7e-58 229.9 193 65.3
FAN23G0683 Fragaria x ananassa HOM05D006781 ORTHO05D008500 1.7e-58 229.9 198 66.7
Lj2g0016513 Lotus japonicus HOM05D006781 ORTHO05D008500 1.7e-58 229.9 195 63.6
TWI73G0565 Tripterygium wilfordii HOM05D006781 ORTHO05D008500 3.9e-58 228.8 192 65.1
CANSAT01G0093 Cannabis sativa HOM05D006781 ORTHO05D008500 6.6e-58 228.0 192 65.1
FvH4_1g13530 Fragaria vesca HOM05D006781 ORTHO05D008500 6.6e-58 228.0 198 65.7
Lalb_Chr09g0322521 Lupinus albus HOM05D006781 ORTHO05D008500 6.6e-58 228.0 196 63.8
arahy.Tifrunner.gnm1.ann1.WUH8B9 Arachis hypogaea HOM05D006781 ORTHO05D008500 8.7e-58 227.6 192 64.6
MD15G1265100 Malus domestica HOM05D006781 ORTHO05D008500 8.7e-58 227.6 195 65.1
Solyc02g085470.3 Solanum lycopersicum HOM05D006781 ORTHO05D008500 8.7e-58 227.6 192 65.6
Sopen02g030150 Solanum pennellii HOM05D006781 ORTHO05D008500 8.7e-58 227.6 192 65.6
PGSC0003DMG400014907 Solanum tuberosum HOM05D006781 ORTHO05D008500 8.7e-58 227.6 192 65.6
Phvul.002G028900 Phaseolus vulgaris HOM05D006781 ORTHO05D008500 1.5e-57 226.9 191 64.9
arahy.Tifrunner.gnm1.ann1.IS0T5T Arachis hypogaea HOM05D006781 ORTHO05D008500 1.9e-57 226.5 191 64.4
VMungo1215G2776 Vigna mungo HOM05D006781 ORTHO05D008500 3.3e-57 225.7 191 64.4
Nitab4.5_0000434g0010 Nicotiana tabacum HOM05D006781 ORTHO05D008500 4.3e-57 225.3 192 65.1
SHI22874 Sapria himalayana HOM05D006781 ORTHO05D008500 4.3e-57 225.3 191 63.4
ClCG01G019450 Citrullus lanatus HOM05D006781 ORTHO05D008500 5.6e-57 224.9 193 65.3
MELO3C007819.2 Cucumis melo HOM05D006781 ORTHO05D008500 5.6e-57 224.9 193 65.3
CsaV3_6G046160 Cucumis sativus L. HOM05D006781 ORTHO05D008500 5.6e-57 224.9 193 65.3
Psat2g160720 Pisum sativum HOM05D006781 ORTHO05D008500 5.6e-57 224.9 202 62.4
Ciclev10025402m.g Citrus clementina HOM05D006781 ORTHO05D008500 7.3e-57 224.6 195 64.6
Glyma.11G066900 Glycine max HOM05D006781 ORTHO05D008500 7.3e-57 224.6 192 64.1
CAN.G358.110 Capsicum annuum HOM05D006781 ORTHO05D008500 9.6e-57 224.2 192 64.6
FAN19G3094 Fragaria x ananassa HOM05D006781 ORTHO05D008500 1.3e-56 223.8 198 65.2
Nitab4.5_0001827g0050 Nicotiana tabacum HOM05D006781 ORTHO05D008500 1.3e-56 223.8 192 64.6
Sed0022670 Sechium edule HOM05D006781 ORTHO05D008500 1.3e-56 223.8 193 65.3
Glyma.01G174900 Glycine max HOM05D006781 ORTHO05D008500 1.6e-56 223.4 192 63.0
PSO541G3113 Papaver somniferum HOM05D006781 ORTHO05D008500 1.6e-56 223.4 218 59.2
GSVIVG01018985001 Vitis vinifera HOM05D006781 ORTHO05D008500 2.1e-56 223.0 198 63.1
CiPaw.02G016000 Carya illinoinensis HOM05D006781 ORTHO05D008500 2.8e-56 222.6 194 62.4
QL06p045633 Quercus lobata HOM05D006781 ORTHO05D008500 2.8e-56 222.6 191 62.8
PGR102G0302 Punica granatum HOM05D006781 ORTHO05D008500 6.2e-56 221.5 201 62.2
FAN28G1912 Fragaria x ananassa HOM05D006781 ORTHO05D008500 8.1e-56 221.1 198 65.2
EL10Ac6g14931 Beta vulgaris HOM05D006781 ORTHO05D008500 1.1e-55 220.7 193 64.2
Atru.chr3.553 Acer truncatum HOM05D006781 ORTHO05D008500 1.8e-55 219.9 198 63.6
Cpa.g.sc544.3 Carica papaya HOM05D006781 ORTHO05D008500 1.8e-55 219.9 192 63.5
Eucgr.H01265 Eucalyptus grandis HOM05D006781 ORTHO05D008500 2.0e-54 216.5 200 62.0
Hund14146 Selenicereus undatus HOM05D006781 ORTHO05D008500 2.0e-54 216.5 192 63.0
TPR.G28685 Trifolium pratense HOM05D006781 ORTHO05D008500 3.4e-54 215.7 203 62.1
Sc18g0003010 Simmondsia chinensis HOM05D006781 ORTHO05D008500 4.9e-53 211.8 190 62.6
Ah.03g139450 Amaranthus hybridus HOM05D006781 ORTHO05D008500 3.5e-51 205.7 187 63.1
Peaxi162Scf00515g00425 Petunia axillaris HOM05D006781 ORTHO05D008500 3.9e-50 202.2 171 64.9
SMO351G0206 Selaginella moellendorffii HOM05D006781 ORTHO05D008500 3.9e-50 202.2 195 54.4
SEGI_35841 Sequoiadendron giganteum HOM05D006781 ORTHO05D008500 1.1e-49 200.7 195 57.4
Rhsim08G0114100 Rhododendron simsii HOM05D006781 ORTHO05D008500 3.1e-47 192.6 182 61.0
Zm00001eb401050 Zea mays HOM05D006781 ORTHO05D008500 4.0e-47 192.2 190 56.8
ATR0733G081 Amborella trichopoda HOM05D006781 ORTHO05D008500 2.6e-46 189.5 188 57.4
Sabra07G0024100 Salix brachista HOM05D006781 ORTHO05D008500 2.6e-46 189.5 158 67.7
AagrBONN_evm.TU.Sc2ySwM_228.123 Anthoceros agrestis HOM05D006781 ORTHO05D008500 3.4e-46 189.1 198 55.1
Mapoly0029s0042 Marchantia polymorpha HOM05D006781 ORTHO05D008500 2.3e-42 176.4 192 51.6
Zm00001eb093700 Zea mays HOM05D006781 ORTHO05D008500 2.3e-42 176.4 217 50.2
C01p02440 Brassica napus HOM05D006781 ORTHO05D008500 2.5e-41 172.9 131 71.0
Zm00001eb025920 Zea mays HOM05D006781 ORTHO05D008500 1.6e-40 170.2 207 50.7
Actinidia19175 Actinidia chinensis HOM05D006781 ORTHO05D008500 6.2e-40 168.3 196 50.5
Zm00001eb221630 Zea mays HOM05D006781 ORTHO05D008500 1.6e-35 153.7 151 59.6
vmacro17849 Vaccinium macrocarpon HOM05D006781 ORTHO05D008500 2.5e-33 146.4 184 49.5
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.1e-31 141.0 123 63.4
Dinv39967 Davidia involucrata HOM05D006781 ORTHO05D008500 7.7e-22 108.2 101 61.4
BcaC08g43565 Brassica carinata HOM05D000551 ORTHO05D001750 5.0e-21 105.5 78 70.5
Zm00001eb203540 Zea mays HOM05D006781 ORTHO05D008500 3.3e-17 92.8 57 78.9


User provided reference genes

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