Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 0.0e+00 1149.0 603 100.0
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 3.9e-196 688.7 486 72.8
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 6.7e-196 688.0 486 72.4
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.1e-195 687.2 486 72.2
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 9.7e-195 684.1 490 71.6
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 1.1e-193 680.6 486 71.8
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 1.5e-187 660.2 486 70.4
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 2.1e-181 639.8 486 68.5
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 1.8e-180 636.7 486 67.3
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 2.8e-178 629.4 490 66.7
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 4.8e-178 628.6 486 66.9
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 3.1e-177 625.9 487 67.8
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 7.0e-177 624.8 487 67.8
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.6e-176 623.6 486 66.3
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 2.7e-176 622.9 487 67.8
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 4.5e-176 622.1 486 66.3
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 1.0e-175 620.9 487 66.5
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.0e-175 620.9 486 65.4
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 1.7e-175 620.2 487 67.8
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 8.5e-175 617.8 486 67.5
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 1.5e-174 617.1 486 65.8
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 3.2e-174 615.9 485 66.2
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.2e-174 615.9 494 64.6
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.2e-174 615.9 494 64.6
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 4.2e-174 615.5 482 68.0
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-173 614.0 494 64.2
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.6e-173 613.6 486 65.4
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.6e-173 613.6 486 65.4
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 2.1e-173 613.2 486 65.8
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 6.1e-173 611.7 486 65.2
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 8.0e-173 611.3 490 66.9
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.0e-172 610.9 494 63.8
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 1.4e-172 610.5 486 64.8
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 1.8e-172 610.1 485 65.2
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 6.8e-172 608.2 486 65.2
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 8.8e-172 607.8 490 65.5
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 1.3e-170 604.0 486 64.4
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 1.3e-170 604.0 486 64.4
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 4.8e-170 602.1 486 64.2
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 8.3e-170 601.3 486 64.2
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.4e-169 600.5 488 65.4
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.4e-169 600.5 486 63.8
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 3.5e-168 595.9 494 61.9
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 5.9e-168 595.1 486 63.6
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 7.7e-168 594.7 506 62.5
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 5.0e-167 592.0 490 62.4
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 5.0e-167 592.0 490 62.9
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 2.5e-166 589.7 486 63.2
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 3.3e-166 589.3 486 61.5
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 7.2e-166 588.2 498 62.2
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 1.0e-164 584.3 486 63.8
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 2.3e-164 583.2 486 61.9
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 4.0e-164 582.4 486 61.7
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 4.0e-164 582.4 486 62.1
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 5.2e-164 582.0 486 61.9
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 5.2e-164 582.0 486 61.7
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 5.2e-164 582.0 486 61.1
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 6.8e-164 581.6 486 61.5
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 6.8e-164 581.6 486 61.9
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.5e-163 580.5 486 60.5
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 2.6e-163 579.7 490 61.6
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 2.6e-163 579.7 486 61.5
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.7e-162 577.0 486 61.3
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 3.7e-162 575.9 494 60.3
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 3.7e-162 575.9 486 61.1
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 1.1e-161 574.3 486 60.9
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 7.0e-161 571.6 485 61.2
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 9.2e-161 571.2 486 60.7
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 2.7e-160 569.7 515 58.3
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 5.9e-160 568.5 486 60.9
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 8.6e-159 564.7 486 60.5
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 1.1e-158 564.3 462 62.6
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 1.9e-158 563.5 486 60.3
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.1e-157 560.1 486 59.9
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 4.7e-157 558.9 483 62.1
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.2e-155 554.3 480 60.4
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 2.9e-154 549.7 485 59.0
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 1.9e-153 547.0 474 61.8
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 9.2e-153 544.7 491 59.7
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 6.0e-152 542.0 491 59.7
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.3e-151 540.0 487 59.5
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 8.6e-151 538.1 491 58.5
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 4.3e-150 535.8 491 58.5
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 8.0e-149 531.6 491 58.0
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 5.2e-148 528.9 487 57.9
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.2e-147 527.7 491 57.8
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.4e-147 525.8 491 58.0
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 4.4e-147 525.8 491 57.0
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 4.9e-146 522.3 491 57.8
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 4.9e-146 522.3 491 57.8
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 8.6e-143 511.5 497 56.7
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 2.1e-141 506.9 496 56.7
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 3.6e-141 506.1 352 75.6
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 2.2e-138 496.9 481 55.7
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 1.3e-122 444.5 400 56.5
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 1.6e-117 427.6 416 53.6
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.1e-117 425.2 233 95.3
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 9.9e-115 418.3 509 48.9
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 2.2e-106 390.6 343 62.1
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 3.8e-106 389.8 313 62.3
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.5e-102 377.1 283 68.6
PGSC0003DMG400015284 Solanum tuberosum HOM05D004426 ORTHO05D005417 1.1e-81 308.5 280 55.4
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 1.6e-72 278.1 222 64.4
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 7.5e-70 269.2 391 43.0
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 2.0e-67 261.2 482 38.6
RcHm_v2.0_Chr3g0476171 Rosa chinensis HOM05D004426 ORTHO05D005417 5.0e-66 256.5 215 60.5
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.1e-65 255.4 496 33.5
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 2.3e-63 247.7 623 31.3
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.5e-49 201.1 141 72.3
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 1.6e-48 198.4 486 32.9
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 1.7e-45 188.3 173 59.5
Psat2g147520 Pisum sativum HOM05D001362 ORTHO05D001310 2.6e-38 164.5 137 57.7
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 1.2e-32 145.6 506 25.9
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 3.7e-21 107.5 85 64.7
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 9.2e-20 102.8 97 57.7
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 2.7e-19 101.3 85 61.2
Os03g0554950 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 2.9e-13 81.3 80 52.5
Actinidia03883 Actinidia chinensis HOM05D004426 ORTHO05D005417 6.0e-11 73.6 88 47.7
Hund10805 Selenicereus undatus HOM05D001165 ORTHO05D000006 2.4e-07 61.6 67 50.7


User provided reference genes

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