Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2890 Ceratophyllum demersum HOM05D006586 ORTHO05D008254 2.8e-218 761.5 356 100.0
Atru.chr9.2534_Atru.chr9.2535 Acer truncatum HOM05D006586 ORTHO05D008254 1.1e-118 430.6 420 51.7
TAR371G0860 Trochodendron aralioides HOM05D006586 ORTHO05D008254 2.2e-117 426.4 423 53.2
Nn4g22672 Nelumbo nucifera HOM05D006586 ORTHO05D008254 3.4e-115 419.1 390 54.1
QL10p008791 Quercus lobata HOM05D006586 ORTHO05D008254 3.4e-115 419.1 423 51.1
Cfa019173 Carpinus fangiana HOM05D006586 ORTHO05D008254 2.9e-114 416.0 422 50.2
Thecc.03G024500 Theobroma cacao HOM05D006586 ORTHO05D008254 1.1e-113 414.1 427 51.3
GSVIVG01007692001 Vitis vinifera HOM05D006586 ORTHO05D008254 1.1e-113 414.1 427 51.5
FAN18G2086 Fragaria x ananassa HOM05D006586 ORTHO05D008254 7.2e-113 411.4 383 53.8
Aqoxy3G02831 Aquilegia oxysepala HOM05D006586 ORTHO05D008254 9.4e-113 411.0 424 51.9
Gohir.A12G272800 Gossypium hirsutum HOM05D006586 ORTHO05D008254 1.2e-112 410.6 425 50.8
PSO063G4773 Papaver somniferum HOM05D006586 ORTHO05D008254 1.2e-112 410.6 423 51.1
Gohir.D12G273500 Gossypium hirsutum HOM05D006586 ORTHO05D008254 7.9e-112 407.9 417 51.1
MSTRG.23151 Avicennia marina HOM05D006586 ORTHO05D008254 1.4e-111 407.1 423 50.6
Gorai.008G293900 Gossypium raimondii HOM05D006586 ORTHO05D008254 1.4e-111 407.1 427 50.6
Haze_07550 Corylus avellana HOM05D006586 ORTHO05D008254 1.8e-111 406.8 416 50.5
Lsat_1_v5_gn_4_75921 Lactuca sativa HOM05D006586 ORTHO05D008254 5.1e-111 405.2 423 49.9
PGR083G0458 Punica granatum HOM05D006586 ORTHO05D008254 1.5e-110 403.7 418 52.6
Ciclev10019926m.g Citrus clementina HOM05D006586 ORTHO05D008254 2.0e-110 403.3 414 49.8
COL.COLO4_30118 Corchorus olitorius HOM05D006586 ORTHO05D008254 2.0e-110 403.3 424 49.3
MD14G1175900 Malus domestica HOM05D006586 ORTHO05D008254 4.3e-110 402.1 424 49.1
Actinidia19342 Actinidia chinensis HOM05D006586 ORTHO05D008254 6.3e-109 398.3 422 50.9
Oeu036011.1 Olea europaea HOM05D006586 ORTHO05D008254 8.2e-109 397.9 419 49.6
PSO832G2003 Papaver somniferum HOM05D006586 ORTHO05D008254 1.1e-108 397.5 439 47.8
SGA_v2.0_scaffold25G10812 Striga asiatica HOM05D006586 ORTHO05D008254 1.1e-108 397.5 424 49.8
CiPaw.11G023000 Carya illinoinensis HOM05D006586 ORTHO05D008254 1.4e-108 397.1 423 48.5
Manes.14G062950 Manihot esculenta HOM05D006586 ORTHO05D008254 1.4e-108 397.1 424 49.1
Prupe.5G169900 Prunus persica HOM05D006586 ORTHO05D008254 5.3e-108 395.2 425 47.5
Migut.O00130 Erythranthe guttata HOM05D006586 ORTHO05D008254 4.5e-107 392.1 424 49.1
Potri.015G080400 Populus trichocarpa HOM05D006586 ORTHO05D008254 5.9e-107 391.7 426 48.6
Eucgr.B00243 Eucalyptus grandis HOM05D006586 ORTHO05D008254 2.9e-106 389.4 423 48.7
SalBow5G1744 Salvia bowleyana HOM05D006586 ORTHO05D008254 2.9e-106 389.4 423 49.2
SalBow5G1232 Salvia bowleyana HOM05D006586 ORTHO05D008254 1.1e-105 387.5 423 49.4
RcHm_v2.0_Chr7g0193061 Rosa chinensis HOM05D006586 ORTHO05D008254 3.2e-105 386.0 425 47.3
FvH4_5g05750 Fragaria vesca HOM05D006586 ORTHO05D008254 4.2e-105 385.6 426 47.9
Duzib205G0761 Durio zibethinus HOM05D006586 ORTHO05D008254 5.5e-105 385.2 423 48.5
CSS0037952 Camellia sinensis var. sinensis HOM05D006586 ORTHO05D008254 2.1e-104 383.3 343 56.9
CAN.G1166.29 Capsicum annuum HOM05D006586 ORTHO05D008254 2.1e-104 383.3 425 48.5
Sopen03g031690 Solanum pennellii HOM05D006586 ORTHO05D008254 2.1e-104 383.3 385 51.9
CsaV3_1G001320 Cucumis sativus L. HOM05D006586 ORTHO05D008254 4.7e-104 382.1 431 46.9
Solyc03g112600.4 Solanum lycopersicum HOM05D006586 ORTHO05D008254 1.4e-103 380.6 385 51.7
Lj1g0001085 Lotus japonicus HOM05D006586 ORTHO05D008254 2.3e-103 379.8 428 48.6
Nitab4.5_0001284g0040 Nicotiana tabacum HOM05D006586 ORTHO05D008254 2.3e-103 379.8 390 51.0
ClCG06G017160 Citrullus lanatus HOM05D006586 ORTHO05D008254 3.0e-103 379.4 451 45.9
ATR1152G085 Amborella trichopoda HOM05D006586 ORTHO05D008254 6.7e-103 378.3 425 46.4
Nitab4.5_0006452g0010 Nicotiana tabacum HOM05D006586 ORTHO05D008254 8.8e-103 377.9 390 50.8
Phvul.009G175900 Phaseolus vulgaris HOM05D006586 ORTHO05D008254 8.8e-103 377.9 430 48.1
Lj9C445T6 Lonicera japonica HOM05D006586 ORTHO05D008254 1.1e-102 377.5 443 46.7
Rhsim08G0174900 Rhododendron simsii HOM05D006586 ORTHO05D008254 9.7e-102 374.4 424 48.3
Medtr3g077420 Medicago truncatula HOM05D006586 ORTHO05D008254 3.7e-101 372.5 422 49.1
HanXRQChr11g0348321 Helianthus annuus HOM05D006586 ORTHO05D008254 4.8e-101 372.1 385 50.6
Cc04_g12530 Coffea canephora HOM05D006586 ORTHO05D008254 8.2e-101 371.3 386 49.5
SEGI_41391 Sequoiadendron giganteum HOM05D006586 ORTHO05D008254 8.2e-101 371.3 400 48.8
Sp2g26210 Schrenkiella parvula HOM05D006586 ORTHO05D008254 1.1e-100 370.9 423 45.9
Sc10g0010150 Simmondsia chinensis HOM05D006586 ORTHO05D008254 2.4e-100 369.8 381 50.4
TPR.G28722 Trifolium pratense HOM05D006586 ORTHO05D008254 4.1e-100 369.0 428 47.4
DCAR_016036 Daucus carota HOM05D006586 ORTHO05D008254 5.3e-100 368.6 425 47.3
Hund09455 Selenicereus undatus HOM05D006586 ORTHO05D008254 7.0e-100 368.2 432 46.5
BcaC04g23364 Brassica carinata HOM05D006586 ORTHO05D008254 2.6e-99 366.3 424 45.5
Ah.02g110650 Amaranthus hybridus HOM05D006586 ORTHO05D008254 2.2e-98 363.2 408 49.3
arahy.Tifrunner.gnm1.ann1.Y9SFAP Arachis hypogaea HOM05D006586 ORTHO05D008254 2.2e-98 363.2 419 47.5
arahy.Tifrunner.gnm1.ann1.BDIM58 Arachis hypogaea HOM05D006586 ORTHO05D008254 2.9e-98 362.8 419 47.5
BolC9t53826H Brassica oleracea HOM05D006586 ORTHO05D008254 2.9e-98 362.8 426 45.1
Sed0000603 Sechium edule HOM05D006586 ORTHO05D008254 1.5e-97 360.5 408 46.6
A09p08080 Brassica napus HOM05D006586 ORTHO05D008254 5.5e-97 358.6 423 44.2
BraA09t36459Z Brassica rapa HOM05D006586 ORTHO05D008254 5.5e-97 358.6 423 44.2
Zm00001eb342240 Zea mays HOM05D006586 ORTHO05D008254 7.2e-97 358.2 384 48.4
THA.LOC104821484 Tarenaya hassleriana HOM05D006586 ORTHO05D008254 9.4e-97 357.8 426 45.3
BcaB04g19943 Brassica carinata HOM05D006586 ORTHO05D008254 1.2e-96 357.5 429 44.3
VMungo1309G1735 Vigna mungo HOM05D006586 ORTHO05D008254 1.6e-96 357.1 401 49.1
AL8G40110 Arabidopsis lyrata HOM05D006586 ORTHO05D008254 3.6e-96 355.9 423 44.2
AUR62028758 Chenopodium quinoa HOM05D006586 ORTHO05D008254 6.1e-96 355.1 387 49.9
EL10Ac5g10701 Beta vulgaris HOM05D006586 ORTHO05D008254 8.0e-96 354.8 384 50.8
MELO3C026280.2 Cucumis melo HOM05D006586 ORTHO05D008254 1.0e-95 354.4 398 48.5
Thhalv10004134m.g Eutrema salsugineum HOM05D006586 ORTHO05D008254 1.4e-95 354.0 425 44.2
C09p09140 Brassica napus HOM05D006586 ORTHO05D008254 2.3e-95 353.2 451 42.6
AT5G63080 Arabidopsis thaliana HOM05D006586 ORTHO05D008254 5.2e-95 352.1 423 44.7
PGSC0003DMG400018168 Solanum tuberosum HOM05D006586 ORTHO05D008254 6.7e-95 351.7 344 51.7
SHI17138 Sapria himalayana HOM05D006586 ORTHO05D008254 5.3e-92 342.0 385 47.0
Carub.0008s2381 Capsella rubella HOM05D006586 ORTHO05D008254 5.9e-91 338.6 462 40.9
FAN04G1931 Fragaria x ananassa HOM05D006586 ORTHO05D008254 2.5e-89 333.2 455 41.5
AUR62008177 Chenopodium quinoa HOM05D006586 ORTHO05D008254 9.4e-89 331.3 394 48.0
Peaxi162Scf00089g01633 Petunia axillaris HOM05D006586 ORTHO05D008254 4.7e-88 328.9 309 53.4
unitig_22.g6289 Utricularia gibba HOM05D006586 ORTHO05D008254 1.8e-84 317.0 407 45.0
Aqoxy1G03747 Aquilegia oxysepala HOM05D006586 ORTHO05D008254 3.6e-80 302.8 367 46.9
FAN13G1600 Fragaria x ananassa HOM05D006586 ORTHO05D008254 8.8e-79 298.1 491 37.7
Ca_16153_v3 Cicer arietinum L. HOM05D006586 ORTHO05D008254 1.2e-78 297.7 350 47.7
vmacro19416 Vaccinium macrocarpon HOM05D006586 ORTHO05D008254 1.5e-78 297.4 574 33.3
Mapoly0108s0029 Marchantia polymorpha HOM05D006586 ORTHO05D008254 9.8e-78 294.7 402 39.6
Os01g0546900 Oryza sativa ssp. japonica HOM05D006586 ORTHO05D008254 1.4e-76 290.8 311 47.6
SMO141G0010 Selaginella moellendorffii HOM05D006586 ORTHO05D008254 3.6e-72 276.2 323 45.5
MBI16_g14603_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 4.7e-72 275.8 377 42.2
ECA232G2495 Erigeron canadensis HOM05D006586 ORTHO05D000001 4.4e-70 269.2 342 43.9
Lalb_Chr11g0070371 Lupinus albus HOM05D006586 ORTHO05D008254 3.7e-69 266.2 203 63.5
Psat5g115280 Pisum sativum HOM05D006586 ORTHO05D008254 2.4e-68 263.5 288 49.7
Glyma.04G185900 Glycine max HOM05D006586 ORTHO05D008254 5.0e-66 255.8 204 61.8
Sabra15G0104600 Salix brachista HOM05D006586 ORTHO05D008254 1.3e-61 241.1 304 44.1
HPP92_023397 Vanilla planifolia HOM05D006586 ORTHO05D008254 5.0e-58 229.2 352 40.9
Aa31LG11G590 Aethionema arabicum HOM05D006586 ORTHO05D008254 9.5e-57 224.9 177 58.8
MBI16_g23863_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 6.2e-56 222.2 280 45.4
Dinv20623 Davidia involucrata HOM05D006586 ORTHO05D008254 1.4e-52 211.1 146 66.4
AagrBONN_evm.TU.Sc2ySwM_344.3069 Anthoceros agrestis HOM05D006586 ORTHO05D008254 1.9e-52 210.7 197 53.8
CBR_g49886 Chara braunii HOM05D006586 ORTHO05D008254 9.2e-52 208.4 536 28.7
Sabra15G0072500 Salix brachista HOM05D006586 ORTHO05D008254 5.2e-39 166.0 151 55.0
FAN08G2490 Fragaria x ananassa HOM05D006586 ORTHO05D008254 8.9e-39 165.2 217 44.7
Dinv20624 Davidia involucrata HOM05D006586 ORTHO05D008254 7.6e-38 162.2 247 39.7
arahy.Tifrunner.gnm1.ann1.1D5X8L Arachis hypogaea HOM05D006586 ORTHO05D008254 4.9e-37 159.5 113 67.3
CANSAT64G0258 Cannabis sativa HOM05D006586 ORTHO05D008254 3.5e-35 153.3 153 49.0
MCO16G527 Micromonas commoda HOM05D006586 ORTHO05D008254 1.1e-28 131.7 337 27.0
Aa31LG11G600 Aethionema arabicum HOM05D006586 ORTHO05D008254 1.6e-27 127.9 155 43.2
arahy.Tifrunner.gnm1.ann1.DN8DE7 Arachis hypogaea HOM05D006586 ORTHO05D008254 1.0e-26 125.2 125 52.8
CARHR276890 Cardamine hirsuta HOM05D006586 ORTHO05D008254 5.1e-26 122.9 154 40.9
PRCOL_00001780 Prasinoderma coloniale HOM05D006586 ORTHO05D008254 6.9e-23 112.5 193 32.6
Cpa.g.sc153.11 Carica papaya HOM05D006586 ORTHO05D008254 7.6e-22 109.0 151 41.1
Lalb_Chr11g0070381 Lupinus albus HOM05D006586 ORTHO05D008254 4.9e-21 106.3 58 75.9
Cpa.g.sc153.15 Carica papaya HOM05D006586 ORTHO05D008254 2.5e-17 94.0 71 62.0
Cre03.g177007 Chlamydomonas reinhardtii HOM05D006586 ORTHO05D008254 1.2e-11 75.1 337 20.5
Cpa.g.sc153.14 Carica papaya HOM05D006586 ORTHO05D008254 1.8e-10 71.2 70 45.7
Glyma.06G180100 Glycine max HOM05D006586 ORTHO05D008254 1.5e-09 68.2 49 65.3


User provided reference genes

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