Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.3e-168 596.3 296 100.0
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 4.0e-85 318.9 273 58.6
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 2.6e-84 316.2 282 58.5
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 8.4e-83 311.2 275 58.5
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.9e-82 310.1 275 57.8
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 3.2e-82 309.3 272 58.5
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 5.4e-82 308.5 279 57.0
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 5.4e-82 308.5 273 57.9
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 5.4e-82 308.5 278 57.9
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 9.3e-82 307.8 275 57.8
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.2e-81 307.4 278 56.8
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 1.6e-81 307.0 274 57.7
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.1e-81 306.6 273 57.1
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 4.6e-81 305.4 281 55.5
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.3e-80 303.9 278 56.8
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 1.8e-80 303.5 275 57.5
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 2.3e-80 303.1 276 55.8
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 3.9e-80 302.4 271 55.4
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 5.1e-80 302.0 276 55.4
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 8.7e-80 301.2 273 56.8
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 8.7e-80 301.2 275 56.7
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.1e-79 300.8 274 56.9
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 1.1e-79 300.8 274 57.3
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 1.9e-79 300.1 273 56.4
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 4.3e-79 298.9 277 56.7
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 7.4e-79 298.1 273 57.5
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 9.6e-79 297.7 277 55.6
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 9.6e-79 297.7 273 56.0
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 9.6e-79 297.7 276 56.5
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.3e-78 297.4 274 57.3
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 1.6e-78 297.0 268 56.0
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 2.1e-78 296.6 282 56.0
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 4.8e-78 295.4 275 56.4
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 6.2e-78 295.0 275 55.6
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 8.1e-78 294.7 282 53.9
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 8.1e-78 294.7 282 53.2
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 1.1e-77 294.3 274 55.8
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.4e-77 293.9 273 54.6
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.4e-77 293.9 305 52.5
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.4e-77 293.9 274 58.0
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.8e-77 293.5 273 56.0
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 5.3e-77 292.0 274 54.7
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 6.9e-77 291.6 274 54.7
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 9.0e-77 291.2 273 54.6
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.2e-76 290.8 282 56.7
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.2e-76 290.8 282 56.7
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.5e-76 290.4 270 55.2
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 4.5e-76 288.9 272 55.1
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 4.5e-76 288.9 273 53.8
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.5e-76 288.9 251 59.0
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 7.6e-76 288.1 278 53.6
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.3e-75 287.3 275 55.3
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.7e-75 287.0 274 55.8
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 1.7e-75 287.0 275 56.0
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 3.8e-75 285.8 278 52.5
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 3.8e-75 285.8 269 55.4
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 2.4e-74 283.1 290 53.4
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.2e-74 282.3 275 54.5
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.5e-74 282.0 313 49.5
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 9.3e-74 281.2 269 54.6
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 9.3e-74 281.2 275 53.5
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 1.2e-73 280.8 276 52.2
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 2.1e-73 280.0 273 53.1
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 2.7e-73 279.6 273 53.5
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 4.6e-73 278.9 269 54.6
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 4.6e-73 278.9 269 54.6
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 4.6e-73 278.9 265 54.3
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 6.0e-73 278.5 265 54.0
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 2.3e-72 276.6 265 54.3
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 2.3e-72 276.6 274 53.3
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 3.0e-72 276.2 276 52.2
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 3.9e-72 275.8 269 53.9
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 2.5e-71 273.1 269 55.0
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 1.3e-70 270.8 271 54.6
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.6e-70 270.4 269 54.3
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 3.7e-70 269.2 266 54.1
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 3.7e-70 269.2 268 52.6
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 9.0e-69 264.6 283 50.9
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.0e-68 263.5 282 49.6
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 7.6e-68 261.5 278 50.0
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 2.2e-67 260.0 273 50.2
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 6.5e-67 258.5 269 50.2
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 8.4e-67 258.1 267 53.9
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 1.1e-66 257.7 269 51.3
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 1.1e-66 257.7 281 50.2
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.4e-66 257.3 269 49.1
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 4.2e-66 255.8 278 50.0
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.6e-65 253.8 270 50.0
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 2.7e-65 253.1 269 49.8
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.3e-64 250.0 269 50.2
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 8.7e-64 248.1 269 49.1
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 5.3e-61 238.8 271 47.6
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 7.6e-60 235.0 274 48.2
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.7e-59 233.8 274 47.8
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 2.2e-59 233.4 271 45.4
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.0e-56 224.6 294 44.2
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.3e-54 217.6 280 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.4e-53 213.4 297 41.4
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 6.9e-53 211.8 279 45.5
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.7e-51 207.2 155 63.9
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 6.5e-51 205.3 244 47.5
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 1.0e-43 181.4 384 32.6
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 2.2e-43 180.3 185 52.4
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.4e-42 177.6 163 55.8
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.1e-37 161.4 268 36.9
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 4.5e-36 156.0 265 38.5
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.0e-35 154.8 144 52.1
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.3e-35 154.5 169 48.5
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 6.7e-32 142.1 138 55.8
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 5.7e-31 139.0 159 45.3
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 5.5e-26 122.5 153 43.8
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 5.5e-18 95.9 65 60.0
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 1.2e-17 94.7 63 60.3
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 2.6e-15 87.0 91 52.7
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 2.8e-09 67.0 69 52.2
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 1.4e-08 64.7 133 39.1
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.3e-08 63.9 37 59.5
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 6.8e-08 62.4 65 49.2
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 2.6e-07 60.5 41 70.7


User provided reference genes

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