Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2587 Ceratophyllum demersum HOM05D003362 ORTHO05D003783 7.7e-56 220.3 117 100.0
CDE07G1335 Ceratophyllum demersum HOM05D003362 ORTHO05D003783 2.8e-42 175.3 144 72.2
Gohir.A13G020400 Gossypium hirsutum HOM05D003362 ORTHO05D003783 1.1e-25 120.2 115 60.0
Gorai.013G023400 Gossypium raimondii HOM05D003362 ORTHO05D003783 5.4e-25 117.9 115 60.0
Gohir.D13G021000 Gossypium hirsutum HOM05D003362 ORTHO05D003783 1.2e-24 116.7 115 59.1
COL.COLO4_10881 Corchorus olitorius HOM05D003362 ORTHO05D003783 3.5e-24 115.2 110 57.3
Duzib114G0926 Durio zibethinus HOM05D003362 ORTHO05D003783 4.6e-24 114.8 110 58.2
Phvul.002G276500 Phaseolus vulgaris HOM05D003362 ORTHO05D003783 7.8e-24 114.0 110 60.0
arahy.Tifrunner.gnm1.ann1.TJ3PHW Arachis hypogaea HOM05D003362 ORTHO05D003783 1.7e-23 112.8 110 58.2
arahy.Tifrunner.gnm1.ann1.VJQ7J1 Arachis hypogaea HOM05D003362 ORTHO05D003783 1.7e-23 112.8 110 58.2
VMungo0720G3152 Vigna mungo HOM05D003362 ORTHO05D003783 1.7e-23 112.8 110 58.2
TWI38G1411 Tripterygium wilfordii HOM05D003362 ORTHO05D003783 5.0e-23 111.3 110 60.0
Phvul.007G008500 Phaseolus vulgaris HOM05D003362 ORTHO05D003783 8.6e-23 110.5 110 59.1
Aqoxy2G01950 Aquilegia oxysepala HOM05D003362 ORTHO05D003783 1.5e-22 109.8 110 56.4
TPR.G10384 Trifolium pratense HOM05D003362 ORTHO05D003783 1.5e-22 109.8 112 57.1
BcaC07g39836 Brassica carinata HOM05D003362 ORTHO05D003783 1.9e-22 109.4 110 59.1
Prupe.2G225200 Prunus persica HOM05D003362 ORTHO05D003783 2.5e-22 109.0 109 57.8
Thecc.10G060600 Theobroma cacao HOM05D003362 ORTHO05D003783 2.5e-22 109.0 109 56.9
Carub.0005s2175 Capsella rubella HOM05D003362 ORTHO05D003783 3.3e-22 108.6 110 57.3
Ca_11318_v3 Cicer arietinum L. HOM05D003362 ORTHO05D003783 3.3e-22 108.6 112 57.1
QL08p057674 Quercus lobata HOM05D003362 ORTHO05D003783 3.3e-22 108.6 133 51.9
MD01G1118000 Malus domestica HOM05D003362 ORTHO05D003783 4.3e-22 108.2 135 48.9
Psat6g237840 Pisum sativum HOM05D003362 ORTHO05D003783 4.3e-22 108.2 112 58.0
AL5G36240 Arabidopsis lyrata HOM05D003362 ORTHO05D003783 5.6e-22 107.8 110 58.2
BcaC08g44726 Brassica carinata HOM05D003362 ORTHO05D003783 5.6e-22 107.8 106 61.3
A09p48130 Brassica napus HOM05D003362 ORTHO05D003783 5.6e-22 107.8 136 53.7
C06p22640 Brassica napus HOM05D003362 ORTHO05D003783 5.6e-22 107.8 106 61.3
BraA09t40267Z Brassica rapa HOM05D003362 ORTHO05D003783 5.6e-22 107.8 136 53.7
Cfa001554 Carpinus fangiana HOM05D003362 ORTHO05D003783 5.6e-22 107.8 110 59.1
C08p30380 Brassica napus HOM05D003362 ORTHO05D003783 7.3e-22 107.5 110 58.2
BolC8t50659H Brassica oleracea HOM05D003362 ORTHO05D003783 7.3e-22 107.5 110 58.2
A07p22450 Brassica napus HOM05D003362 ORTHO05D003783 9.5e-22 107.1 110 59.1
BolC6t37453H Brassica oleracea HOM05D003362 ORTHO05D003783 9.5e-22 107.1 110 59.1
BraA07t29921Z Brassica rapa HOM05D003362 ORTHO05D003783 9.5e-22 107.1 110 59.1
Sed0018943 Sechium edule HOM05D003362 ORTHO05D003783 1.2e-21 106.7 110 54.5
MSTRG.21607 Avicennia marina HOM05D003362 ORTHO05D003783 2.1e-21 105.9 110 58.2
THA.LOC104825165 Tarenaya hassleriana HOM05D003362 ORTHO05D003783 2.1e-21 105.9 110 56.4
CARHR165150 Cardamine hirsuta HOM05D003362 ORTHO05D003783 2.8e-21 105.5 110 58.2
AUR62015655 Chenopodium quinoa HOM05D003362 ORTHO05D003783 2.8e-21 105.5 126 52.4
Actinidia38221 Actinidia chinensis HOM05D003362 ORTHO05D003783 3.6e-21 105.1 124 51.6
AT3G55120 Arabidopsis thaliana HOM05D003362 ORTHO05D003783 3.6e-21 105.1 110 56.4
Potri.010G213000 Populus trichocarpa HOM05D003362 ORTHO05D003783 3.6e-21 105.1 110 57.3
SalBow3G2785 Salvia bowleyana HOM05D003362 ORTHO05D003783 3.6e-21 105.1 127 51.2
SalBow3G3107 Salvia bowleyana HOM05D003362 ORTHO05D003783 3.6e-21 105.1 127 51.2
AUR62020547 Chenopodium quinoa HOM05D003362 ORTHO05D003783 4.7e-21 104.8 110 57.3
Ciclev10032697m.g Citrus clementina HOM05D003362 ORTHO05D003783 4.7e-21 104.8 109 55.0
Thhalv10010658m.g Eutrema salsugineum HOM05D003362 ORTHO05D003783 4.7e-21 104.8 130 51.5
RcHm_v2.0_Chr1g0365111 Rosa chinensis HOM05D003362 ORTHO05D003783 4.7e-21 104.8 121 52.1
SalBow1G4850 Salvia bowleyana HOM05D003362 ORTHO05D003783 4.7e-21 104.8 127 51.2
FAN03G1303 Fragaria x ananassa HOM05D003362 ORTHO05D003783 6.2e-21 104.4 121 52.1
FAN10G3261 Fragaria x ananassa HOM05D003362 ORTHO05D003783 6.2e-21 104.4 121 52.1
Glyma.20G241700 Glycine max HOM05D003362 ORTHO05D003783 6.2e-21 104.4 110 55.5
Lalb_Chr02g0143921 Lupinus albus HOM05D003362 ORTHO05D003783 6.2e-21 104.4 110 56.4
MD01G1117800 Malus domestica HOM05D003362 ORTHO05D003783 6.2e-21 104.4 130 49.2
MD07G1186300 Malus domestica HOM05D003362 ORTHO05D003783 6.2e-21 104.4 110 57.3
Medtr1g115870 Medicago truncatula HOM05D003362 ORTHO05D003783 6.2e-21 104.4 112 54.5
BcaB02g07695 Brassica carinata HOM05D003362 ORTHO05D003783 8.0e-21 104.0 134 48.5
CANSAT21G2171 Cannabis sativa HOM05D003362 ORTHO05D003783 8.0e-21 104.0 110 56.4
Cc02_g08570 Coffea canephora HOM05D003362 ORTHO05D003783 8.0e-21 104.0 111 56.8
Ah.06g183020 Amaranthus hybridus HOM05D003362 ORTHO05D003783 1.1e-20 103.6 110 55.5
CiPaw.01G280400 Carya illinoinensis HOM05D003362 ORTHO05D003783 1.1e-20 103.6 130 50.8
Lj5g0014981 Lotus japonicus HOM05D003362 ORTHO05D003783 1.1e-20 103.6 110 56.4
Manes.07G107200 Manihot esculenta HOM05D003362 ORTHO05D003783 1.1e-20 103.6 110 56.4
Atru.chr12.582 Acer truncatum HOM05D003362 ORTHO05D003783 1.4e-20 103.2 110 53.6
CSS0028549 Camellia sinensis var. sinensis HOM05D003362 ORTHO05D003783 1.4e-20 103.2 126 50.8
CSS0050436 Camellia sinensis var. sinensis HOM05D003362 ORTHO05D003783 1.4e-20 103.2 126 50.8
Nn2g12834 Nelumbo nucifera HOM05D003362 ORTHO05D003783 1.4e-20 103.2 110 56.4
FvH4_7g20870 Fragaria vesca HOM05D003362 ORTHO05D003783 1.8e-20 102.8 110 53.6
FAN06G2019 Fragaria x ananassa HOM05D003362 ORTHO05D003783 1.8e-20 102.8 110 53.6
Dinv31395 Davidia involucrata HOM05D003362 ORTHO05D003783 2.3e-20 102.4 110 56.4
HanXRQChr15g0496881 Helianthus annuus HOM05D003362 ORTHO05D003783 2.3e-20 102.4 110 55.5
Sp5g07300 Schrenkiella parvula HOM05D003362 ORTHO05D003783 2.3e-20 102.4 110 57.3
HanXRQChr15g0496871 Helianthus annuus HOM05D003362 ORTHO05D003783 3.1e-20 102.1 110 54.5
vmacro07205 Vaccinium macrocarpon HOM05D003362 ORTHO05D003783 3.1e-20 102.1 109 55.0
CARHR165140 Cardamine hirsuta HOM05D003362 ORTHO05D003783 4.0e-20 101.7 110 51.8
CSS0023458 Camellia sinensis var. sinensis HOM05D003362 ORTHO05D003783 5.2e-20 101.3 123 51.2
PGR142G2050 Punica granatum HOM05D003362 ORTHO05D003783 8.9e-20 100.5 110 55.5
DCAR_027694 Daucus carota HOM05D003362 ORTHO05D003783 1.2e-19 100.1 91 57.1
MBI14_g16292_MAGBIO Magnolia biondii HOM05D003362 ORTHO05D003783 1.2e-19 100.1 132 46.2
ECA232G4190 Erigeron canadensis HOM05D003362 ORTHO05D003783 1.5e-19 99.8 125 50.4
MD01G1118100 Malus domestica HOM05D003362 ORTHO05D003783 1.5e-19 99.8 135 45.9
Medtr1g115890 Medicago truncatula HOM05D003362 ORTHO05D003783 1.5e-19 99.8 129 49.6
Sc06g0001890 Simmondsia chinensis HOM05D003362 ORTHO05D003783 1.5e-19 99.8 124 49.2
Zm00001eb062510 Zea mays HOM05D003362 ORTHO05D003783 1.5e-19 99.8 138 46.4
Sabra10G0164900 Salix brachista HOM05D003362 ORTHO05D003783 2.0e-19 99.4 110 54.5
Aa31LG10G10040 Aethionema arabicum HOM05D003362 ORTHO05D003783 2.6e-19 99.0 138 47.1
Hma1.2p1_0629F.1_g192100 Hydrangea macrophylla HOM05D003362 ORTHO05D003783 2.6e-19 99.0 110 53.6
Rhsim01G0013100 Rhododendron simsii HOM05D003362 ORTHO05D003783 2.6e-19 99.0 110 53.6
EL10Ac2g03488 Beta vulgaris HOM05D003362 ORTHO05D003783 3.4e-19 98.6 110 55.5
CAN.G184.19 Capsicum annuum HOM05D003362 ORTHO05D003783 3.4e-19 98.6 123 50.4
unitig_0.g651 Utricularia gibba HOM05D003362 ORTHO05D003783 3.4e-19 98.6 109 56.0
Hund19984 Selenicereus undatus HOM05D003362 ORTHO05D003783 4.4e-19 98.2 110 54.5
Lj1A930T84 Lonicera japonica HOM05D003362 ORTHO05D003783 7.5e-19 97.4 126 50.8
Sopen05g006090 Solanum pennellii HOM05D003362 ORTHO05D003783 7.5e-19 97.4 110 52.7
Migut.D00159 Erythranthe guttata HOM05D003362 ORTHO05D003783 9.8e-19 97.1 109 54.1
SGA_v2.0_scaffold2G01424 Striga asiatica HOM05D003362 ORTHO05D003783 9.8e-19 97.1 110 55.5
Solyc05g010320.4 Solanum lycopersicum HOM05D003362 ORTHO05D003783 1.7e-18 96.3 110 50.0
GSVIVG01032619001 Vitis vinifera HOM05D003362 ORTHO05D003783 1.7e-18 96.3 128 48.4
Lsat_1_v5_gn_9_66221 Lactuca sativa HOM05D003362 ORTHO05D003783 3.7e-18 95.1 129 47.3
Nitab4.5_0005313g0010 Nicotiana tabacum HOM05D003362 ORTHO05D003783 6.4e-18 94.4 110 53.6
PSO339G0073 Papaver somniferum HOM05D003362 ORTHO05D003783 6.4e-18 94.4 110 50.9
BcaB05g22784 Brassica carinata HOM05D003362 ORTHO05D003783 8.3e-18 94.0 136 44.9
Actinidia38220 Actinidia chinensis HOM05D003362 ORTHO05D003783 1.4e-17 93.2 114 50.9
Thecc.10G061200 Theobroma cacao HOM05D003362 ORTHO05D003783 1.4e-17 93.2 137 46.0
PSO384G0434 Papaver somniferum HOM05D003362 ORTHO05D003783 1.9e-17 92.8 110 49.1
Solyc05g010310.3 Solanum lycopersicum HOM05D003362 ORTHO05D003783 7.0e-17 90.9 110 50.9
Os03g0819600 Oryza sativa ssp. japonica HOM05D003362 ORTHO05D003783 9.2e-17 90.5 139 42.4
HanXRQChr15g0496901 Helianthus annuus HOM05D003362 ORTHO05D003783 1.6e-16 89.7 110 51.8
Nitab4.5_0000027g0470 Nicotiana tabacum HOM05D003362 ORTHO05D003783 1.6e-16 89.7 110 51.8
Sopen05g006080 Solanum pennellii HOM05D003362 ORTHO05D003783 1.6e-16 89.7 110 50.9
MELO3C025484.2 Cucumis melo HOM05D003362 ORTHO05D003783 2.1e-16 89.4 113 52.2
Peaxi162Scf00006g00088 Petunia axillaris HOM05D003362 ORTHO05D003783 2.1e-16 89.4 106 51.9
TAR623G0942 Trochodendron aralioides HOM05D003362 ORTHO05D003783 2.7e-16 89.0 124 49.2
ClCG09G020280 Citrullus lanatus HOM05D003362 ORTHO05D003783 4.6e-16 88.2 113 50.4
CsaV3_5G026140 Cucumis sativus L. HOM05D003362 ORTHO05D003783 7.8e-16 87.4 140 43.6
Lalb_Chr06g0164121 Lupinus albus HOM05D003362 ORTHO05D003783 1.0e-15 87.0 110 50.0
Eucgr.F03816 Eucalyptus grandis HOM05D003362 ORTHO05D003783 2.3e-15 85.9 110 44.5
HPP92_021163 Vanilla planifolia HOM05D003362 ORTHO05D003783 3.0e-15 85.5 110 47.3
BcaC07g39837 Brassica carinata HOM05D003362 ORTHO05D003783 3.9e-15 85.1 138 41.3
C08p30390 Brassica napus HOM05D003362 ORTHO05D003783 3.9e-15 85.1 138 41.3
BolC8t50661H Brassica oleracea HOM05D003362 ORTHO05D003783 3.9e-15 85.1 138 41.3
PGR044G1755 Punica granatum HOM05D003362 ORTHO05D003783 1.5e-14 83.2 109 46.8
SEGI_22659 Sequoiadendron giganteum HOM05D003362 ORTHO05D003783 1.5e-14 83.2 134 40.3
PSO407G0338 Papaver somniferum HOM05D003362 ORTHO05D003783 1.9e-14 82.8 112 48.2
Rhsim03G0098600 Rhododendron simsii HOM05D003362 ORTHO05D003783 1.9e-14 82.8 110 45.5
BraA09t40269Z Brassica rapa HOM05D003362 ORTHO05D003783 2.5e-14 82.4 142 38.7
MD07G1186400 Malus domestica HOM05D003362 ORTHO05D003783 3.3e-14 82.0 106 49.1
BcaNung04348 Brassica carinata HOM05D003362 ORTHO05D003783 7.3e-14 80.9 124 44.4
ATR0759G123 Amborella trichopoda HOM05D003362 ORTHO05D003783 1.2e-13 80.1 123 48.0
BolC7t46557H Brassica oleracea HOM05D003362 ORTHO05D003783 3.6e-13 78.6 122 46.7
vmacro00636 Vaccinium macrocarpon HOM05D003362 ORTHO05D003783 3.6e-13 78.6 91 48.4
C07p61310 Brassica napus HOM05D003362 ORTHO05D003783 8.1e-13 77.4 122 46.7
PGR044G1348 Punica granatum HOM05D003362 ORTHO05D003783 8.1e-13 77.4 120 41.7
AT5G66220 Arabidopsis thaliana HOM05D003362 ORTHO05D003783 1.1e-12 77.0 106 46.2
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.1e-12 77.0 106 46.2
Carub.0008s2828 Capsella rubella HOM05D003362 ORTHO05D003783 1.1e-12 77.0 111 45.9
MBI14_g22903_MAGBIO Magnolia biondii HOM05D003362 ORTHO05D003783 1.4e-12 76.6 134 41.0
CARHR281510 Cardamine hirsuta HOM05D003362 ORTHO05D003783 3.1e-12 75.5 110 43.6
BcaB01g00125 Brassica carinata HOM05D003362 ORTHO05D003783 5.2e-12 74.7 135 37.8
Sp2g30475 Schrenkiella parvula HOM05D003362 ORTHO05D003783 5.2e-12 74.7 110 42.7
A09p48140 Brassica napus HOM05D003362 ORTHO05D003783 8.9e-12 73.9 168 34.5
Thhalv10004922m.g Eutrema salsugineum HOM05D003362 ORTHO05D003783 2.0e-11 72.8 106 44.3
Nn2g10542 Nelumbo nucifera HOM05D003362 ORTHO05D003783 6.4e-10 67.8 110 38.2
AL8G45310 Arabidopsis lyrata HOM05D003362 ORTHO05D003783 8.3e-10 67.4 108 41.7
AUR62015656 Chenopodium quinoa HOM05D003362 ORTHO05D003783 1.1e-09 67.0 85 48.2
ATR0759G079 Amborella trichopoda HOM05D003362 ORTHO05D003783 1.4e-09 66.6 110 38.2
Eucgr.J01152 Eucalyptus grandis HOM05D003362 ORTHO05D003783 1.4e-09 66.6 105 39.0
Lj5g0004759 Lotus japonicus HOM05D003362 ORTHO05D003783 1.4e-09 66.6 107 40.2
Medtr7g027135 Medicago truncatula HOM05D003362 ORTHO05D003783 1.4e-09 66.6 77 50.6
EL10Ac2g03495 Beta vulgaris HOM05D003362 ORTHO05D003783 1.9e-09 66.2 110 37.3
Glyma.20G241500 Glycine max HOM05D003362 ORTHO05D003783 3.2e-09 65.5 109 35.8
Haze_16975 Corylus avellana HOM05D003093 ORTHO05D004301 4.1e-09 65.1 70 58.6
Phvul.007G008600 Phaseolus vulgaris HOM05D003362 ORTHO05D003783 5.4e-09 64.7 109 37.6
Lj5g0007558 Lotus japonicus HOM05D003362 ORTHO05D003783 7.1e-09 64.3 107 41.1
Lj5g0021768 Lotus japonicus HOM05D003362 ORTHO05D003783 7.1e-09 64.3 107 39.3
ATR0759G124 Amborella trichopoda HOM05D003362 ORTHO05D003783 2.7e-08 62.4 110 33.6
Phvul.003G216600 Phaseolus vulgaris HOM05D003362 ORTHO05D003783 2.7e-08 62.4 106 38.7
VMungo0720G0350 Vigna mungo HOM05D003362 ORTHO05D003783 3.5e-08 62.0 109 36.7
RcHm_v2.0_Chr7g0221431 Rosa chinensis HOM05D003362 ORTHO05D003783 4.6e-08 61.6 83 44.6
arahy.Tifrunner.gnm1.ann1.425ZXH Arachis hypogaea HOM05D003362 ORTHO05D003783 6.0e-08 61.2 109 37.6
A03p63820 Brassica napus HOM05D003362 ORTHO05D003783 6.0e-08 61.2 90 46.7
BraA03t15453Z Brassica rapa HOM05D003362 ORTHO05D003783 6.0e-08 61.2 90 46.7
TPR.G30361 Trifolium pratense HOM05D003362 ORTHO05D003783 6.0e-08 61.2 109 33.9
Glyma.10G292200 Glycine max HOM05D003362 ORTHO05D003783 1.0e-07 60.5 123 38.2
Glyma.20G241600 Glycine max HOM05D003362 ORTHO05D003783 1.0e-07 60.5 106 38.7
Psat6g238360 Pisum sativum HOM05D003362 ORTHO05D003783 1.0e-07 60.5 109 34.9
Medtr1g115820 Medicago truncatula HOM05D003362 ORTHO05D003783 1.3e-07 60.1 109 33.9
Psat6g237920 Pisum sativum HOM05D003362 ORTHO05D003783 1.3e-07 60.1 109 36.7
arahy.Tifrunner.gnm1.ann1.2GDU51 Arachis hypogaea HOM05D003362 ORTHO05D003783 3.0e-07 58.9 109 37.6
Peaxi162Scf00038g01957 Petunia axillaris HOM05D003362 ORTHO05D003783 3.0e-07 58.9 103 40.8
Sc06g0001900 Simmondsia chinensis HOM05D003362 ORTHO05D003783 3.0e-07 58.9 46 63.0
Cpa.g.sc1855.1 Carica papaya HOM05D003362 ORTHO05D003783 3.9e-07 58.5 42 66.7
Oeu057578.1 Olea europaea HOM05D003362 ORTHO05D003783 6.6e-07 57.8 72 51.4
Medtr1g115850 Medicago truncatula HOM05D003362 ORTHO05D003783 1.1e-06 57.0 106 38.7
Medtr1g115840 Medicago truncatula HOM05D003362 ORTHO05D003783 1.9e-06 56.2 106 38.7
VMungo0720G1901 Vigna mungo HOM05D003362 ORTHO05D003783 1.9e-06 56.2 106 37.7
Actinidia02995 Actinidia chinensis HOM05D003362 ORTHO05D003783 3.3e-06 55.5 32 71.9
TPR.G10424 Trifolium pratense HOM05D003362 ORTHO05D003783 3.3e-06 55.5 106 36.8


User provided reference genes

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