Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2111 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 7.8e-109 397.1 198 100.0
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.1e-74 280.8 217 72.4
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 8.2e-42 174.5 220 47.3
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.4e-41 173.7 221 47.1
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 9.1e-41 171.0 220 45.9
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 1.3e-39 167.2 220 44.1
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 6.5e-39 164.9 224 45.1
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 1.2e-37 160.6 219 42.5
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 1.6e-37 160.2 222 41.4
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 1.0e-36 157.5 222 42.3
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.0e-36 157.5 222 41.9
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 5.1e-36 155.2 219 42.0
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 5.1e-36 155.2 221 41.2
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 1.1e-35 154.1 222 41.0
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 1.5e-35 153.7 218 42.7
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.5e-35 153.7 219 39.3
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 3.3e-35 152.5 224 42.9
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 3.3e-35 152.5 222 41.9
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 4.4e-35 152.1 225 42.2
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 4.4e-35 152.1 222 40.1
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 5.7e-35 151.8 222 40.1
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 1.3e-34 150.6 232 40.5
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 3.7e-34 149.1 221 39.8
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 1.1e-33 147.5 226 38.9
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 1.1e-33 147.5 224 39.3
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.4e-33 146.4 222 39.2
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.4e-33 146.4 225 41.8
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 3.1e-33 146.0 224 39.3
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.1e-33 146.0 222 39.2
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.2e-32 144.1 220 38.2
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 2.0e-32 143.3 225 40.9
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 2.6e-32 142.9 233 39.9
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 3.5e-32 142.5 220 40.9
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.9e-32 141.7 222 38.3
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 7.7e-32 141.4 228 40.8
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 1.3e-31 140.6 219 39.3
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.3e-31 140.6 219 39.3
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 3.8e-31 139.0 219 38.8
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 5.0e-31 138.7 226 39.4
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.5e-30 137.1 220 37.3
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.5e-30 137.1 224 38.8
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 1.9e-30 136.7 221 36.7
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 1.9e-30 136.7 225 37.3
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 1.9e-30 136.7 219 38.8
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 2.5e-30 136.3 219 38.4
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 2.5e-30 136.3 222 35.1
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 3.2e-30 136.0 221 37.1
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.2e-30 136.0 252 34.1
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 3.2e-30 136.0 219 37.9
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.2e-30 135.6 222 38.7
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 5.5e-30 135.2 219 37.0
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 5.5e-30 135.2 225 35.6
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.2e-30 134.8 252 34.1
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 9.4e-30 134.4 220 39.5
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 9.4e-30 134.4 220 39.5
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 9.4e-30 134.4 252 34.1
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 2.7e-29 132.9 252 36.1
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 3.6e-29 132.5 220 37.3
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 4.7e-29 132.1 228 38.2
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 8.0e-29 131.3 228 38.2
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 8.0e-29 131.3 215 38.1
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 1.0e-28 131.0 225 36.9
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 1.0e-28 131.0 225 36.9
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.4e-28 130.6 220 39.1
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 1.8e-28 130.2 220 39.1
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 1.8e-28 130.2 224 37.5
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 3.0e-28 129.4 203 41.4
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 3.0e-28 129.4 225 36.0
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 5.2e-28 128.6 220 38.6
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 2.6e-27 126.3 220 37.7
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 3.3e-27 125.9 219 36.1
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 3.3e-27 125.9 219 36.5
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 4.4e-27 125.6 224 39.3
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 1.3e-26 124.0 225 35.1
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 1.7e-26 123.6 216 36.1
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 1.7e-26 123.6 219 36.1
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 2.2e-26 123.2 217 37.3
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 3.7e-26 122.5 225 35.6
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 4.8e-26 122.1 222 35.6
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 4.8e-26 122.1 222 35.6
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 6.3e-26 121.7 221 36.2
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 6.3e-26 121.7 220 33.2
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 8.2e-26 121.3 218 36.7
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 2.4e-25 119.8 219 34.2
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 3.1e-25 119.4 217 35.0
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 3.1e-25 119.4 223 35.0
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 4.1e-25 119.0 218 36.7
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 7.0e-25 118.2 220 33.6
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.2e-24 117.5 188 38.3
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 1.2e-24 117.5 217 32.7
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 7.7e-24 114.8 219 33.8
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 6.5e-23 111.7 269 30.9
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 1.1e-22 110.9 191 37.2
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 2.5e-22 109.8 217 35.5
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 5.5e-22 108.6 192 38.5
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.2e-21 107.5 219 36.5
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 2.1e-21 106.7 181 37.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 1.0e-20 104.4 220 33.6
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 8.8e-20 101.3 129 44.2
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 4.4e-19 99.0 182 34.6
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 4.4e-19 99.0 223 32.7
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.4e-17 94.0 224 33.0
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 4.9e-10 68.9 172 25.6
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 7.7e-08 61.6 75 46.7
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.3e-07 60.8 215 24.2
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 1.7e-07 60.5 113 34.5


User provided reference genes

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