Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 2.2e-146 522.3 270 100.0
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 9.2e-145 516.9 270 98.5
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 5.3e-108 394.8 272 75.7
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.5e-107 393.3 273 75.8
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.5e-107 393.3 273 75.8
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 5.6e-102 374.8 274 71.9
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.1e-101 372.9 272 72.1
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 7.6e-99 364.4 270 71.5
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 2.2e-98 362.8 268 69.8
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 4.9e-98 361.7 273 70.7
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 1.4e-97 360.1 272 70.6
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 7.1e-97 357.8 273 67.8
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 7.1e-97 357.8 272 68.0
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 1.6e-96 356.7 272 68.8
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.6e-96 356.7 275 67.3
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 2.1e-96 356.3 269 68.8
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.7e-96 355.9 274 70.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 6.0e-96 354.8 273 67.4
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 7.9e-96 354.4 273 70.0
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.3e-95 353.6 273 69.6
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 2.3e-95 352.8 276 69.2
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 2.3e-95 352.8 273 67.4
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.3e-95 352.8 271 68.6
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 5.1e-95 351.7 276 68.8
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 5.1e-95 351.7 275 67.3
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 5.1e-95 351.7 272 67.3
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 6.7e-95 351.3 272 67.3
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.7e-95 351.3 269 68.8
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.1e-94 350.5 268 68.3
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.1e-94 350.5 273 68.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.9e-94 349.7 272 67.3
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 1.9e-94 349.7 272 67.6
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 1.9e-94 349.7 285 68.4
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.3e-94 349.0 273 68.9
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.3e-94 349.0 275 68.7
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.3e-94 348.6 273 69.6
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 4.3e-94 348.6 272 68.8
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 5.7e-94 348.2 274 69.0
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 5.7e-94 348.2 274 65.7
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 7.4e-94 347.8 272 67.3
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 7.4e-94 347.8 273 68.9
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.6e-94 347.4 275 68.0
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 1.3e-93 347.1 269 69.1
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.6e-93 346.7 274 68.2
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.6e-93 346.7 275 68.7
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 2.1e-93 346.3 272 65.8
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.1e-93 346.3 275 67.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 3.7e-93 345.5 272 65.8
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 4.8e-93 345.1 274 67.5
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.8e-93 345.1 273 68.9
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.8e-93 345.1 274 66.8
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 6.2e-93 344.7 277 69.0
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 1.1e-92 344.0 272 65.8
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.4e-92 343.6 272 65.4
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-92 343.6 275 68.0
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-92 343.6 275 68.0
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 3.1e-92 342.4 274 68.2
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.3e-92 341.7 273 66.7
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 5.3e-92 341.7 273 66.7
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 6.9e-92 341.3 272 67.3
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 6.9e-92 341.3 275 67.6
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.0e-92 340.9 272 65.1
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 1.2e-91 340.5 273 67.0
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.2e-91 340.5 274 67.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.5e-91 340.1 273 67.0
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 3.4e-91 339.0 284 64.4
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 5.8e-91 338.2 273 67.4
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.3e-90 337.0 273 65.9
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.7e-90 336.7 273 65.9
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.2e-90 336.3 273 66.7
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 2.2e-90 336.3 275 65.8
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.8e-90 335.5 273 65.9
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 3.8e-90 335.5 271 66.1
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 8.4e-90 334.3 273 65.2
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 8.4e-90 334.3 273 65.9
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 8.4e-90 334.3 274 66.8
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.9e-89 333.2 273 65.2
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.9e-89 333.2 360 55.0
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 3.2e-89 332.4 287 64.1
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.2e-89 332.4 273 66.3
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.2e-89 332.4 273 65.2
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.2e-89 332.4 273 65.2
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 5.5e-89 331.6 272 64.0
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 9.3e-89 330.9 300 61.0
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 9.3e-89 330.9 271 66.1
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.2e-88 330.5 284 63.7
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 3.5e-88 328.9 271 65.7
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 4.6e-88 328.6 272 65.8
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 6.1e-88 328.2 272 64.0
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 1.0e-87 327.4 273 67.4
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 1.0e-87 327.4 272 65.8
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 1.8e-87 326.6 272 63.2
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 2.3e-87 326.2 274 63.9
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 2.3e-87 326.2 274 65.7
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 3.0e-87 325.9 271 63.1
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.9e-87 325.5 287 62.0
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 8.7e-87 324.3 273 67.0
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 8.7e-87 324.3 274 63.1
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 1.1e-86 323.9 276 63.4
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.9e-86 323.2 273 67.4
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.9e-86 323.2 273 64.1
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 1.6e-85 320.1 268 63.8
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.3e-85 318.2 278 62.9
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 1.1e-84 317.4 267 63.3
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.4e-84 317.0 298 60.4
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 3.1e-84 315.8 345 52.8
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.2e-83 313.9 256 64.8
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 5.9e-83 311.6 274 60.9
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 7.7e-83 311.2 271 62.0
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.2e-82 309.7 272 61.8
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 3.8e-82 308.9 332 53.9
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.4e-81 307.0 258 64.3
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 2.5e-81 306.2 308 55.5
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 2.5e-81 306.2 308 55.5
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 2.1e-80 303.1 261 62.5
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.6e-80 302.4 270 60.4
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 3.6e-80 302.4 295 56.6
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 5.7e-78 295.0 238 67.2
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 8.2e-77 291.2 317 54.9
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.1e-76 290.8 232 64.7
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.4e-76 290.4 333 52.3
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 1.8e-76 290.0 232 66.8
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 6.9e-76 288.1 274 60.2
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 3.4e-75 285.8 234 64.1
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.2e-74 283.1 232 65.5
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 3.8e-74 282.3 274 57.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 5.0e-74 282.0 225 68.0
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.1e-72 276.6 234 63.7
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.9e-71 272.3 233 62.2
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 2.0e-70 270.0 232 62.9
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 2.0e-70 270.0 267 56.6
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 3.3e-70 269.2 262 59.2
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.0e-66 257.7 174 75.9
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 1.0e-66 257.7 232 62.1
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 5.5e-65 251.9 286 51.0
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.5e-62 243.8 271 54.6
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 5.7e-62 241.9 263 52.5
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 1.8e-60 236.9 339 44.0
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 4.5e-59 232.3 229 55.9
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.7e-58 230.3 278 49.6
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 2.9e-58 229.6 182 67.0
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.5e-58 228.4 285 48.4
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 9.4e-57 224.6 259 49.0
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.6e-56 222.6 259 48.3
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 1.0e-55 221.1 227 56.8
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 5.2e-55 218.8 162 69.1
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 1.2e-54 217.6 172 68.0
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 2.0e-51 206.8 169 63.3
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 7.7e-51 204.9 203 58.1
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 7.7e-51 204.9 174 63.2
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 1.3e-50 204.1 177 62.7
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 8.5e-50 201.4 272 45.6
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 4.2e-49 199.1 132 76.5
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.6e-48 197.2 233 48.9
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 2.7e-48 196.4 163 65.6
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 4.4e-46 189.1 150 68.7
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.8e-44 183.7 156 64.7
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.0e-42 177.9 164 59.8
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 1.1e-41 174.5 213 50.7
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 4.2e-41 172.6 257 46.3
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.7e-38 162.2 126 66.7
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 3.7e-37 159.5 233 41.6
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.6e-35 154.1 134 58.2
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.0e-35 153.7 202 48.5
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 1.5e-30 137.5 172 49.4
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 8.3e-29 131.7 150 53.3
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 5.4e-28 129.0 134 53.0
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 1.7e-26 124.0 88 71.6
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.3e-25 119.4 184 40.8
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.7e-24 115.9 160 43.8
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.5e-22 110.9 73 75.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.4e-22 109.8 91 67.0
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 6.6e-18 95.5 149 42.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.9e-17 94.0 69 69.6
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 7.3e-17 92.0 73 67.1
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.1e-15 86.7 67 67.2
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 7.8e-11 72.0 136 36.8
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.7e-10 70.9 173 33.5
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 7.3e-09 65.5 42 76.2
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.6e-08 63.2 34 82.4
Medtr3g063430 Medicago truncatula HOM05D001715 ORTHO05D259122 2.6e-06 57.0 55 52.7


User provided reference genes

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