Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 4.4e-236 820.8 399 100.0
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 2.0e-143 513.1 392 65.1
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 3.5e-140 502.3 387 65.1
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 7.2e-138 494.6 390 65.1
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 2.7e-137 492.7 391 65.0
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 1.4e-136 490.3 406 62.3
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 1.8e-136 490.0 392 62.0
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 1.8e-136 490.0 399 61.4
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 1.8e-136 490.0 398 61.6
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 3.0e-136 489.2 391 62.4
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 3.0e-136 489.2 387 62.5
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 5.2e-136 488.4 405 61.0
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 6.8e-136 488.0 399 61.7
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 1.5e-135 486.9 395 60.8
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 1.5e-135 486.9 384 62.8
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 2.0e-135 486.5 391 61.9
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 4.4e-135 485.3 397 60.7
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 4.8e-134 481.9 401 60.1
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 8.3e-134 481.1 390 61.3
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 2.4e-133 479.6 396 61.1
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 3.1e-133 479.2 388 63.1
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 5.4e-133 478.4 396 61.9
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 5.4e-133 478.4 391 60.9
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 7.0e-133 478.0 396 61.9
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 2.0e-132 476.5 387 59.7
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 2.7e-132 476.1 389 62.2
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 4.5e-132 475.3 394 60.7
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 7.7e-132 474.6 396 61.4
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 7.7e-132 474.6 392 62.2
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 7.7e-132 474.6 387 62.3
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 2.9e-131 472.6 390 61.8
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 3.8e-131 472.2 397 58.2
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 3.8e-131 472.2 394 59.9
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 5.0e-131 471.9 384 59.9
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 8.5e-131 471.1 390 62.6
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 8.5e-131 471.1 401 59.9
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 1.5e-130 470.3 392 60.5
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 1.9e-130 469.9 387 62.5
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 1.9e-130 469.9 388 62.4
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 1.9e-130 469.9 389 60.4
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 4.2e-130 468.8 385 61.3
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 4.7e-129 465.3 395 59.2
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 4.7e-129 465.3 385 61.6
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 6.1e-129 464.9 385 60.5
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 6.1e-129 464.9 395 59.2
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 8.0e-129 464.5 388 60.3
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 1.8e-128 463.4 390 62.1
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 1.8e-128 463.4 372 64.5
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 1.8e-128 463.4 384 62.0
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 5.2e-128 461.8 404 58.2
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 6.8e-128 461.5 393 60.1
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 6.8e-128 461.5 387 61.2
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 1.5e-127 460.3 394 60.2
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 2.0e-127 459.9 388 59.5
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 2.6e-127 459.5 405 58.8
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 5.7e-127 458.4 393 57.3
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 7.5e-127 458.0 386 60.4
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 9.8e-127 457.6 394 60.2
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 4.9e-126 455.3 404 57.7
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.0e-124 449.9 393 57.0
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 2.7e-124 449.5 391 59.3
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 1.9e-122 443.4 391 57.5
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 1.2e-121 440.7 386 56.5
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 2.1e-121 439.9 375 59.7
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 4.7e-121 438.7 387 57.1
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.0e-120 437.6 424 55.0
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 3.0e-120 436.0 375 57.9
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 3.2e-117 426.0 384 57.8
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 5.4e-117 425.2 400 55.0
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 1.3e-115 420.6 367 58.0
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.1e-114 417.5 389 57.3
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 1.6e-113 413.7 369 57.5
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 6.8e-112 408.3 341 58.7
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 6.4e-110 401.7 350 59.4
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 1.1e-104 384.4 324 61.4
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 1.8e-104 383.6 449 49.0
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 2.3e-104 383.3 326 61.0
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 2.4e-101 373.2 385 50.6
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 3.5e-100 369.4 314 59.2
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 3.9e-99 365.9 305 61.3
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 8.6e-99 364.8 373 52.3
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 7.3e-98 361.7 464 45.5
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 6.8e-96 355.1 344 53.5
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 3.3e-90 336.3 393 48.9
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 4.0e-88 329.3 293 57.0
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 1.7e-86 323.9 307 56.7
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.4e-85 320.9 539 38.8
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.1e-81 307.0 313 50.2
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 2.4e-77 293.5 387 45.7
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 2.1e-76 290.4 287 53.0
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 7.4e-74 282.0 266 54.5
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 8.4e-70 268.5 363 44.9
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 3.5e-68 263.1 337 45.4
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 1.3e-67 261.2 394 41.1
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 2.3e-67 260.4 166 72.3
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 3.9e-67 259.6 171 72.5
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 3.3e-66 256.5 254 53.9
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 3.1e-64 250.0 436 36.5
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 5.8e-63 245.7 386 40.2
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 3.8e-62 243.0 288 48.3
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.9e-58 230.7 150 73.3
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 3.3e-58 229.9 274 47.4
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 5.7e-50 202.6 266 45.1
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 1.3e-49 201.4 228 49.1
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 4.2e-45 186.4 413 33.4
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.4e-40 170.6 111 74.8
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 4.5e-39 166.4 410 32.4
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 7.7e-39 165.6 209 45.0
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.9e-37 161.0 121 65.3
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 8.2e-33 145.6 180 42.8
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 1.9e-29 134.4 82 70.7
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.3e-27 127.5 89 64.0
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 3.0e-27 127.1 320 28.8
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 9.7e-26 122.1 141 44.7
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 1.3e-25 121.7 84 70.2
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.8e-24 117.9 170 44.1
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.2e-22 110.9 82 65.9
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 8.0e-20 102.4 67 73.1
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 6.3e-17 92.8 70 64.3
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.4e-16 91.7 52 78.8
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.4e-16 91.7 52 78.8
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 3.1e-16 90.5 60 66.7
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 2.7e-15 87.4 58 63.8
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.5e-13 81.6 51 68.6
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.4e-08 65.1 53 58.5
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 4.1e-08 63.5 125 32.8
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 1.2e-07 62.0 81 42.0
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 5.0e-06 56.6 30 76.7


User provided reference genes

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