Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 0.0e+00 1181.4 609 100.0
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 2.1e-277 958.7 611 77.7
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 1.9e-275 952.2 611 79.1
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 7.6e-272 940.3 623 77.4
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 6.4e-271 937.2 611 78.7
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 1.1e-270 936.4 611 76.9
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 6.0e-269 930.6 605 79.0
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 2.3e-268 928.7 609 77.2
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 5.6e-267 924.1 610 75.4
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 1.3e-266 922.9 609 77.3
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 2.1e-266 922.2 611 77.4
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 8.1e-266 920.2 610 77.9
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 8.1e-266 920.2 611 73.6
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 8.1e-266 920.2 607 72.3
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 1.8e-265 919.1 611 73.6
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 4.0e-265 917.9 611 74.0
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 4.0e-265 917.9 611 74.1
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 6.9e-265 917.1 612 73.7
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 6.9e-265 917.1 610 77.0
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 2.0e-264 915.6 623 74.2
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 4.5e-264 914.4 611 74.6
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 2.9e-263 911.8 634 72.7
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 6.4e-263 910.6 611 74.3
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 8.4e-263 910.2 611 74.6
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 1.4e-262 909.4 610 70.8
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 3.2e-262 908.3 612 73.7
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 3.2e-262 908.3 610 76.6
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 4.2e-262 907.9 611 74.0
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 7.1e-262 907.1 611 73.8
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 9.3e-262 906.7 610 76.7
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 2.7e-261 905.2 611 76.3
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 1.0e-260 903.3 611 74.1
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 1.0e-260 903.3 611 72.3
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 1.3e-260 902.9 608 74.5
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 1.8e-260 902.5 611 74.5
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 2.3e-260 902.1 613 76.8
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 2.3e-260 902.1 611 75.5
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 3.9e-260 901.4 609 73.6
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 1.1e-259 899.8 609 73.1
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 1.1e-259 899.8 609 73.1
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 1.9e-259 899.0 611 75.6
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 2.5e-259 898.7 609 74.1
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 4.3e-259 897.9 611 72.5
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 1.6e-258 896.0 606 73.3
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 3.7e-258 894.8 606 72.8
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 4.8e-258 894.4 611 75.6
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 6.2e-258 894.0 609 74.5
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 8.1e-258 893.6 611 75.1
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 8.1e-258 893.6 609 72.2
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 1.4e-257 892.9 611 75.3
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 1.8e-257 892.5 606 72.9
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 2.4e-257 892.1 601 72.5
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 5.3e-257 891.0 624 71.6
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 5.8e-256 887.5 622 74.1
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 1.0e-255 886.7 606 74.3
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 1.7e-255 885.9 613 74.2
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.2e-255 885.6 622 74.0
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.2e-255 885.6 619 74.2
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 2.9e-255 885.2 638 69.9
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 2.9e-255 885.2 608 72.5
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 2.5e-254 882.1 611 71.7
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 3.2e-254 881.7 610 71.8
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 4.2e-254 881.3 611 70.7
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 4.2e-254 881.3 596 70.6
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 1.2e-253 879.8 611 68.1
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 1.6e-253 879.4 606 71.6
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 7.9e-253 877.1 610 71.5
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 2.3e-252 875.5 611 67.9
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 2.3e-252 875.5 611 70.5
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 6.7e-252 874.0 606 71.9
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 3.3e-251 871.7 605 71.9
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 3.3e-251 871.7 605 71.9
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 7.4e-251 870.5 606 71.8
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 1.6e-250 869.4 617 73.3
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 4.8e-250 867.8 662 69.0
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 8.2e-250 867.1 610 71.6
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.8e-249 865.9 610 71.8
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 3.1e-249 865.1 610 71.8
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 6.9e-249 864.0 608 69.2
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 6.9e-249 864.0 609 72.1
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 3.4e-248 861.7 611 71.0
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 4.5e-248 861.3 611 68.7
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 4.5e-248 861.3 606 71.0
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 1.7e-247 859.4 608 70.7
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 2.2e-247 859.0 609 70.3
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 2.9e-247 858.6 609 70.1
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 1.9e-246 855.9 610 71.1
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 3.5e-245 851.7 611 69.1
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 7.9e-245 850.5 608 69.4
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.3e-244 849.7 610 70.5
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 1.8e-244 849.4 609 70.6
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 3.0e-244 848.6 609 70.8
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 3.0e-244 848.6 611 66.8
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 3.9e-244 848.2 610 70.7
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 6.7e-244 847.4 605 70.1
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 1.1e-243 846.7 611 69.9
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 1.1e-243 846.7 607 67.1
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 3.3e-243 845.1 689 62.7
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 4.3e-243 844.7 612 69.3
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 4.3e-243 844.7 594 70.5
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 1.6e-242 842.8 608 69.9
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 2.8e-242 842.0 609 70.3
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 2.8e-242 842.0 609 70.3
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 2.8e-242 842.0 607 66.4
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 3.7e-242 841.6 611 67.1
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 1.4e-241 839.7 624 67.3
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 3.4e-240 835.1 691 64.7
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 4.5e-240 834.7 611 67.9
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 3.8e-239 831.6 608 68.9
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 6.5e-239 830.9 565 74.2
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 3.6e-237 825.1 611 67.6
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 1.0e-236 823.5 608 68.6
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 2.3e-236 822.4 683 61.2
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 1.0e-231 807.0 593 67.5
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 9.4e-230 800.4 609 66.7
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 1.8e-228 796.2 614 66.0
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 1.8e-228 796.2 614 67.6
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.1e-227 793.5 614 67.9
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 3.3e-227 792.0 646 63.0
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 3.3e-227 792.0 614 66.3
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 8.2e-226 787.3 614 65.6
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 1.8e-225 786.2 619 65.8
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 1.8e-225 786.2 619 65.8
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 1.2e-224 783.5 614 65.6
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 4.5e-224 781.6 610 65.6
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 7.7e-224 780.8 619 65.3
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 1.7e-223 779.6 619 65.1
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 3.2e-222 775.4 525 73.3
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 4.2e-222 775.0 614 65.3
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 7.2e-222 774.2 614 64.8
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 9.4e-222 773.9 525 73.0
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 2.3e-220 769.2 610 64.8
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 2.8e-202 709.1 606 58.6
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 2.0e-192 676.4 611 54.0
Hund20686 Selenicereus undatus HOM05D003955 ORTHO05D004684 4.0e-188 662.1 478 69.2
TPR.G12969 Trifolium pratense HOM05D003955 ORTHO05D004684 2.0e-187 659.8 472 72.7
Actinidia35113 Actinidia chinensis HOM05D003955 ORTHO05D004684 1.4e-177 627.1 403 77.2
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 3.0e-175 619.4 614 56.7
Cc04_g06570 Coffea canephora HOM05D003955 ORTHO05D004684 4.4e-171 605.5 388 76.8
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 1.5e-166 590.5 613 50.4
Thecc.02G279800 Theobroma cacao HOM05D003955 ORTHO05D004684 1.1e-158 564.3 430 67.7
Lalb_Chr06g0165551 Lupinus albus HOM05D003955 ORTHO05D004684 3.4e-147 526.2 428 65.2
HPP92_000152 Vanilla planifolia HOM05D003955 ORTHO05D004684 5.8e-147 525.4 480 57.3
SEGI_26510 Sequoiadendron giganteum HOM05D003955 ORTHO05D004684 2.1e-120 437.2 350 62.6
CBR_g51409 Chara braunii HOM05D003955 ORTHO05D004684 1.4e-119 434.5 516 51.4
BolC5t33521H Brassica oleracea HOM05D003955 ORTHO05D004684 5.1e-119 432.6 328 64.6
Atru.chr9.1765 Acer truncatum HOM05D003955 ORTHO05D004684 8.2e-109 398.7 283 69.3
Oeu031790.1 Olea europaea HOM05D003955 ORTHO05D004684 5.0e-106 389.4 355 56.1
MCO02G121 Micromonas commoda HOM05D003955 ORTHO05D004684 3.7e-101 373.2 643 36.5
PRCOL_00004882 Prasinoderma coloniale HOM05D003955 ORTHO05D004684 3.1e-92 343.6 622 38.7
Lalb_Chr06g0165541 Lupinus albus HOM05D003955 ORTHO05D004684 8.0e-88 328.9 185 79.5
Cc04_g06580 Coffea canephora HOM05D003955 ORTHO05D004684 9.5e-81 305.4 220 71.8
Haze_27019 Corylus avellana HOM05D003955 ORTHO05D004684 2.1e-80 304.3 492 38.0
Atru.chr9.1764 Acer truncatum HOM05D003955 ORTHO05D004684 2.1e-64 251.1 170 78.8
Zm00001eb337090 Zea mays HOM05D003955 ORTHO05D004684 1.4e-63 248.4 166 78.3
Zm00001eb396840 Zea mays HOM05D003955 ORTHO05D004684 1.8e-63 248.1 166 78.3
Zm00001eb287030 Zea mays HOM05D003955 ORTHO05D004684 1.3e-61 241.9 164 78.0
Zm00001eb076360 Zea mays HOM05D003955 ORTHO05D004684 8.3e-61 239.2 164 77.4
Ca_27465_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 7.6e-54 216.1 131 75.6
Hund20688 Selenicereus undatus HOM05D003955 ORTHO05D004684 2.2e-53 214.5 131 74.0
BcaC05g28709 Brassica carinata HOM05D003955 ORTHO05D004684 5.4e-52 209.9 128 78.1
TPR.G12747 Trifolium pratense HOM05D003955 ORTHO05D004684 1.7e-50 204.9 130 73.1
Oeu031786.1 Olea europaea HOM05D003955 ORTHO05D004684 3.8e-45 187.2 131 69.5
BcaB03g13114 Brassica carinata HOM05D003955 ORTHO05D030800 1.8e-39 168.3 161 51.6
RcHm_v2.0_Chr5g0062751 Rosa chinensis HOM05D003955 ORTHO05D004684 2.9e-37 161.0 101 75.2
Zm00001eb221950 Zea mays HOM05D003955 ORTHO05D004684 6.4e-29 133.3 95 62.1
Atru.chr5.1031 Acer truncatum HOM05D003955 ORTHO05D030800 2.1e-24 118.2 81 66.7
BcaB07g32970 Brassica carinata HOM05D003955 ORTHO05D004684 1.5e-22 112.1 173 39.9
Oeu013618.1 Olea europaea HOM05D003955 ORTHO05D004684 2.1e-19 101.7 105 53.3
Zm00001eb369430 Zea mays HOM05D003955 ORTHO05D004684 5.7e-17 93.6 54 75.9
Actinidia37893 Actinidia chinensis HOM05D003955 ORTHO05D004684 1.4e-15 89.0 53 75.5
Actinidia37891 Actinidia chinensis HOM05D003955 ORTHO05D030800 9.0e-15 86.3 54 66.7
RcHm_v2.0_Chr6g0266701 Rosa chinensis HOM05D003955 ORTHO05D004684 7.6e-14 83.2 72 56.9
RcHm_v2.0_Chr6g0295791 Rosa chinensis HOM05D003955 ORTHO05D004684 3.8e-13 80.9 72 55.6
Zm00001eb265330 Zea mays HOM05D003955 ORTHO05D004684 8.5e-13 79.7 61 62.3
COL.COLO4_22316 Corchorus olitorius HOM05D003955 ORTHO05D004684 7.9e-11 73.2 54 63.0
FvH4_5g16561 Fragaria vesca HOM05D020439 ORTHO05D035355 1.9e-09 68.6 49 59.2
ECA246G5178 Erigeron canadensis HOM05D002303 ORTHO05D007639 5.7e-09 67.0 204 27.5
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 4.8e-08 63.9 172 25.6
MD03G1215900 Malus domestica HOM05D002303 ORTHO05D007639 1.1e-07 62.8 193 24.9
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 2.4e-07 61.6 287 24.0
Carub.0008s1480 Capsella rubella HOM05D002303 ORTHO05D007639 3.1e-07 61.2 176 27.8
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 3.1e-07 61.2 287 24.0
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 4.1e-07 60.8 287 24.0
TWI38G2363 Tripterygium wilfordii HOM05D002303 ORTHO05D007639 9.1e-07 59.7 193 26.4
Psat7g046640 Pisum sativum HOM05D005401 ORTHO05D006582 1.5e-06 58.9 134 31.3
Prupe.4G196900 Prunus persica HOM05D002303 ORTHO05D007639 1.5e-06 58.9 193 24.4
HanXRQChr05g0158911 Helianthus annuus HOM05D002303 ORTHO05D007639 4.5e-06 57.4 195 23.6


User provided reference genes

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