Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0059 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 5.4e-187 657.5 334 100.0
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 3.4e-133 478.8 333 79.9
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.1e-57 228.0 365 40.0
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 7.6e-56 221.9 365 40.5
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 2.2e-55 220.3 365 41.1
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 1.3e-47 194.5 368 40.2
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 2.5e-43 180.3 340 37.4
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 4.0e-41 172.9 373 33.8
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 1.5e-40 171.0 327 37.3
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 7.6e-40 168.7 339 36.9
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 9.9e-40 168.3 343 35.6
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 6.4e-39 165.6 332 37.7
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 3.2e-38 163.3 336 35.1
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 5.4e-38 162.5 338 36.1
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 7.1e-38 162.2 354 34.2
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 1.2e-37 161.4 346 35.3
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 4.6e-37 159.5 341 37.0
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 1.3e-36 157.9 337 37.1
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 5.1e-36 156.0 358 33.5
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 5.6e-35 152.5 339 35.1
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.8e-34 150.2 338 34.9
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 8.1e-34 148.7 327 37.0
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 1.8e-33 147.5 344 34.6
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.8e-33 147.5 340 36.8
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 3.1e-33 146.7 326 35.6
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 5.3e-33 146.0 325 34.2
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 6.9e-33 145.6 341 33.1
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 9.0e-33 145.2 328 34.5
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 4.5e-32 142.9 350 32.9
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 4.5e-32 142.9 328 34.8
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 4.5e-32 142.9 336 33.9
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 7.6e-32 142.1 342 33.9
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 9.9e-32 141.7 351 32.2
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 1.3e-31 141.4 327 34.9
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 2.2e-31 140.6 326 34.7
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.2e-31 140.6 335 35.8
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.2e-31 140.6 335 36.1
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.2e-31 140.6 327 35.2
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 2.2e-31 140.6 339 32.2
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 3.8e-31 139.8 335 35.5
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.8e-31 139.8 335 35.8
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 3.8e-31 139.8 329 34.7
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.9e-31 139.4 335 35.5
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 6.4e-31 139.0 327 34.3
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 8.4e-31 138.7 336 36.0
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 8.4e-31 138.7 333 36.0
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 8.4e-31 138.7 341 32.6
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 8.4e-31 138.7 342 33.0
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 1.1e-30 138.3 339 36.3
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.1e-30 138.3 342 33.0
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 1.1e-30 138.3 342 33.0
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.4e-30 137.9 335 35.2
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 2.4e-30 137.1 329 33.7
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 4.2e-30 136.3 336 34.5
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 7.1e-30 135.6 331 33.8
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.1e-30 135.6 335 35.5
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 9.3e-30 135.2 326 34.0
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 2.7e-29 133.7 325 33.5
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.7e-29 133.7 339 36.6
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 3.5e-29 133.3 331 33.8
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 4.6e-29 132.9 332 33.7
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 6.0e-29 132.5 380 31.6
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 1.0e-28 131.7 338 33.4
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 1.8e-28 131.0 337 31.8
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 2.3e-28 130.6 345 33.0
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 3.9e-28 129.8 326 32.8
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 3.9e-28 129.8 334 31.7
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 3.9e-28 129.8 331 30.8
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 5.1e-28 129.4 325 32.9
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 6.7e-28 129.0 326 30.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 1.1e-27 128.3 340 33.2
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.5e-27 127.9 326 34.0
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.5e-27 127.9 333 36.0
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 1.9e-27 127.5 329 33.1
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 1.9e-27 127.5 338 32.5
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 1.9e-27 127.5 331 35.3
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 2.5e-27 127.1 344 32.3
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 4.3e-27 126.3 347 31.7
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 1.3e-26 124.8 337 31.8
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 1.6e-26 124.4 337 29.4
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 2.8e-26 123.6 338 30.2
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 4.8e-26 122.9 328 32.3
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 8.1e-26 122.1 339 30.7
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 1.8e-25 120.9 327 32.4
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 2.4e-25 120.6 342 32.2
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.0e-25 119.8 326 32.5
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 6.9e-25 119.0 326 33.4
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.2e-24 118.2 336 31.2
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 1.5e-24 117.9 330 30.6
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 5.8e-24 115.9 366 30.9
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 7.6e-24 115.5 336 31.2
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 7.6e-24 115.5 337 31.5
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 2.9e-23 113.6 335 31.6
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 2.5e-22 110.5 333 30.6
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.3e-20 104.8 219 35.2
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.3e-20 104.8 219 35.2
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 5.1e-20 102.8 329 29.5
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.5e-19 101.3 364 29.7
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 4.1e-17 93.2 262 32.1
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 4.5e-16 89.7 337 27.9
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 6.7e-12 75.9 102 44.1
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 6.7e-12 75.9 102 44.1
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 3.1e-09 67.0 102 38.2
Actinidia03883 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.0e-07 62.0 107 37.4


User provided reference genes

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