Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4147 Ceratophyllum demersum HOM05D004970 ORTHO05D005665 7.9e-118 427.2 223 100.0
CDE11G0972 Ceratophyllum demersum HOM05D004970 ORTHO05D005665 1.9e-63 246.5 159 81.8
TAR375G0320 Trochodendron aralioides HOM05D004970 ORTHO05D005665 2.2e-35 153.3 222 45.5
CDE01G0673 Ceratophyllum demersum HOM05D004970 ORTHO05D005665 3.5e-33 146.0 225 43.1
CDE12G0545 Ceratophyllum demersum HOM05D004970 ORTHO05D005665 5.6e-31 138.7 224 42.0
Atru.chr12.1813 Acer truncatum HOM05D004970 ORTHO05D005665 6.9e-29 131.7 218 43.1
Haze_00346 Corylus avellana HOM05D004970 ORTHO05D005665 9.0e-29 131.3 228 41.2
Cfa016111 Carpinus fangiana HOM05D004970 ORTHO05D005665 1.2e-28 131.0 215 42.3
Nn1g09277 Nelumbo nucifera HOM05D004970 ORTHO05D005665 1.5e-28 130.6 214 40.7
Sopen03g028090 Solanum pennellii HOM05D004970 ORTHO05D005665 2.6e-28 129.8 227 37.4
MBI04_g30791_MAGBIO Magnolia biondii HOM05D004970 ORTHO05D005665 3.4e-28 129.4 214 42.5
Nitab4.5_0005545g0050 Nicotiana tabacum HOM05D004970 ORTHO05D005665 1.3e-27 127.5 228 37.7
Solyc03g097320.3 Solanum lycopersicum HOM05D004970 ORTHO05D005665 2.2e-27 126.7 227 36.6
Nn3g19169 Nelumbo nucifera HOM05D004970 ORTHO05D005665 3.8e-27 125.9 214 39.7
COL.COLO4_08410 Corchorus olitorius HOM05D004970 ORTHO05D005665 1.1e-26 124.4 218 42.2
CAN.G732.31 Capsicum annuum HOM05D004970 ORTHO05D005665 1.4e-26 124.0 228 36.8
ATR0568G198 Amborella trichopoda HOM05D004970 ORTHO05D005665 1.9e-26 123.6 221 41.6
Gohir.A11G221400 Gossypium hirsutum HOM05D004970 ORTHO05D005665 1.9e-26 123.6 228 39.5
Duzib128G2026 Durio zibethinus HOM05D004970 ORTHO05D005665 2.4e-26 123.2 228 41.7
Gohir.D11G234800 Gossypium hirsutum HOM05D004970 ORTHO05D005665 7.1e-26 121.7 228 40.4
Ciclev10031289m.g Citrus clementina HOM05D004970 ORTHO05D005665 9.3e-26 121.3 223 39.9
Duzib177G0786 Durio zibethinus HOM05D004970 ORTHO05D005665 9.3e-26 121.3 228 40.8
CSS0041522 Camellia sinensis var. sinensis HOM05D004970 ORTHO05D005665 1.6e-25 120.6 226 37.2
Nitab4.5_0000021g0930 Nicotiana tabacum HOM05D004970 ORTHO05D005665 1.6e-25 120.6 227 36.6
Gorai.007G247500 Gossypium raimondii HOM05D004970 ORTHO05D005665 2.1e-25 120.2 228 39.9
TWI32G0575 Tripterygium wilfordii HOM05D004970 ORTHO05D005665 2.7e-25 119.8 230 40.0
Peaxi162Scf00516g00423 Petunia axillaris HOM05D004970 ORTHO05D005665 7.9e-25 118.2 227 36.1
Manes.08G159000 Manihot esculenta HOM05D004970 ORTHO05D005665 1.0e-24 117.9 215 37.7
CiPaw.06G037800 Carya illinoinensis HOM05D004970 ORTHO05D005665 1.3e-24 117.5 221 39.8
Thecc.05G227300 Theobroma cacao HOM05D004970 ORTHO05D005665 1.3e-24 117.5 228 40.8
Cpa.g.sc43.154 Carica papaya HOM05D004970 ORTHO05D005665 3.0e-24 116.3 221 40.7
CiPaw.05G210700 Carya illinoinensis HOM05D004970 ORTHO05D005665 3.0e-24 116.3 222 40.1
Dinv17236 Davidia involucrata HOM05D004970 ORTHO05D005665 8.7e-24 114.8 227 35.7
DCAR_020435 Daucus carota HOM05D004970 ORTHO05D005665 1.5e-23 114.0 223 38.1
Manes.09G130800 Manihot esculenta HOM05D004970 ORTHO05D005665 1.5e-23 114.0 228 37.3
HanXRQChr05g0144361 Helianthus annuus HOM05D004970 ORTHO05D005665 1.9e-23 113.6 221 35.7
Lalb_Chr19g0140121 Lupinus albus HOM05D004970 ORTHO05D005665 1.9e-23 113.6 218 38.5
CAN.G65.124 Capsicum annuum HOM05D004970 ORTHO05D005665 2.5e-23 113.2 207 37.2
Lsat_1_v5_gn_8_14040 Lactuca sativa HOM05D004970 ORTHO05D005665 5.6e-23 112.1 217 37.3
CSS0029772 Camellia sinensis var. sinensis HOM05D004970 ORTHO05D005665 9.6e-23 111.3 228 37.7
ClCG02G007910 Citrullus lanatus HOM05D004970 ORTHO05D005665 9.6e-23 111.3 228 39.0
ECA233G0740 Erigeron canadensis HOM05D004970 ORTHO05D005665 9.6e-23 111.3 223 36.3
CSS0006334 Camellia sinensis var. sinensis HOM05D004970 ORTHO05D005665 1.6e-22 110.5 228 37.3
ECA238G3380 Erigeron canadensis HOM05D004970 ORTHO05D005665 2.8e-22 109.8 219 33.8
Peaxi162Scf00815g00348 Petunia axillaris HOM05D004970 ORTHO05D005665 2.8e-22 109.8 228 35.5
Potri.019G043300 Populus trichocarpa HOM05D004970 ORTHO05D005665 2.8e-22 109.8 222 37.4
MELO3C024760.2 Cucumis melo HOM05D004970 ORTHO05D005665 3.6e-22 109.4 229 39.7
Prupe.2G329700 Prunus persica HOM05D004970 ORTHO05D005665 3.6e-22 109.4 225 40.4
Nitab4.5_0002998g0010 Nicotiana tabacum HOM05D004970 ORTHO05D005665 8.1e-22 108.2 222 36.5
Sabra19G0054000 Salix brachista HOM05D004970 ORTHO05D005665 8.1e-22 108.2 228 37.3
PGSC0003DMG400026491 Solanum tuberosum HOM05D004970 ORTHO05D005665 8.1e-22 108.2 164 37.8
arahy.Tifrunner.gnm1.ann1.N044W1 Arachis hypogaea HOM05D004970 ORTHO05D005665 1.8e-21 107.1 220 35.0
Sopen06g029080 Solanum pennellii HOM05D004970 ORTHO05D005665 1.8e-21 107.1 222 36.5
FAN10G0750 Fragaria x ananassa HOM05D004970 ORTHO05D005665 2.4e-21 106.7 215 38.1
PGSC0003DMG400027038 Solanum tuberosum HOM05D004970 ORTHO05D005665 3.1e-21 106.3 222 36.5
Aa31LG2G2110 Aethionema arabicum HOM05D004970 ORTHO05D005665 4.0e-21 105.9 228 37.7
arahy.Tifrunner.gnm1.ann1.TJCL76 Arachis hypogaea HOM05D004970 ORTHO05D005665 4.0e-21 105.9 220 35.0
MSTRG.8566 Avicennia marina HOM05D004970 ORTHO05D005665 5.3e-21 105.5 226 36.3
Oeu028991.1 Olea europaea HOM05D004970 ORTHO05D005665 5.3e-21 105.5 225 34.7
Lj3g0014992 Lotus japonicus HOM05D004970 ORTHO05D005665 6.9e-21 105.1 214 36.9
MD01G1240100 Malus domestica HOM05D004970 ORTHO05D005665 6.9e-21 105.1 215 37.7
Aqoxy3G01903 Aquilegia oxysepala HOM05D004970 ORTHO05D005665 9.0e-21 104.8 222 34.7
Glyma.12G013300 Glycine max HOM05D004970 ORTHO05D005665 9.0e-21 104.8 221 37.6
CsaV3_2G035830 Cucumis sativus L. HOM05D004970 ORTHO05D005665 2.0e-20 103.6 229 38.9
FAN01G0343 Fragaria x ananassa HOM05D004970 ORTHO05D005665 2.0e-20 103.6 226 36.3
Glyma.09G223600 Glycine max HOM05D004970 ORTHO05D005665 2.0e-20 103.6 221 37.1
TWI60G0079 Tripterygium wilfordii HOM05D004970 ORTHO05D005665 2.0e-20 103.6 223 37.2
Rhsim03G0225500 Rhododendron simsii HOM05D004970 ORTHO05D005665 2.6e-20 103.2 208 35.6
Medtr0172s0030 Medicago truncatula HOM05D004970 ORTHO05D005665 3.4e-20 102.8 214 38.3
Solyc06g072710.3 Solanum lycopersicum HOM05D004970 ORTHO05D005665 3.4e-20 102.8 210 36.2
FvH4_7g34280 Fragaria vesca HOM05D004970 ORTHO05D005665 4.5e-20 102.4 226 35.8
Phvul.011G016400 Phaseolus vulgaris HOM05D004970 ORTHO05D005665 4.5e-20 102.4 221 35.7
Lalb_Chr01g0000711 Lupinus albus HOM05D004970 ORTHO05D005665 5.8e-20 102.1 217 39.2
PSO782G0173 Papaver somniferum HOM05D004970 ORTHO05D005665 5.8e-20 102.1 232 34.9
Potri.013G075400 Populus trichocarpa HOM05D004970 ORTHO05D005665 7.6e-20 101.7 220 37.3
Nitab4.5_0000645g0090 Nicotiana tabacum HOM05D004970 ORTHO05D005665 1.3e-19 100.9 227 35.7
HanXRQChr14g0461121 Helianthus annuus HOM05D004970 ORTHO05D005665 1.7e-19 100.5 218 33.0
MD07G1311500 Malus domestica HOM05D004970 ORTHO05D005665 1.7e-19 100.5 227 37.0
vmacro06358 Vaccinium macrocarpon HOM05D004970 ORTHO05D005665 1.7e-19 100.5 227 34.4
PSO063G5802 Papaver somniferum HOM05D004970 ORTHO05D005665 2.2e-19 100.1 232 34.9
Lsat_1_v5_gn_2_127081 Lactuca sativa HOM05D004970 ORTHO05D005665 2.9e-19 99.8 226 34.5
RcHm_v2.0_Chr1g0384631 Rosa chinensis HOM05D004970 ORTHO05D005665 3.8e-19 99.4 213 39.4
Sp5g19000 Schrenkiella parvula HOM05D004970 ORTHO05D005665 4.9e-19 99.0 233 35.6
Ca_00814_v3 Cicer arietinum L. HOM05D004970 ORTHO05D005665 8.4e-19 98.2 227 35.7
Gohir.A08G221630 Gossypium hirsutum HOM05D004970 ORTHO05D005665 1.1e-18 97.8 229 35.4
Sabra13G0064900 Salix brachista HOM05D004970 ORTHO05D005665 1.4e-18 97.4 228 35.5
Thhalv10002486m.g Eutrema salsugineum HOM05D004970 ORTHO05D005665 2.4e-18 96.7 233 35.6
Sed0007466 Sechium edule HOM05D004970 ORTHO05D005665 3.2e-18 96.3 228 36.4
THA.LOC104821684 Tarenaya hassleriana HOM05D004970 ORTHO05D005665 4.2e-18 95.9 227 37.0
VMungo1127G0435 Vigna mungo HOM05D004970 ORTHO05D005665 9.3e-18 94.7 221 34.4
Gohir.D08G239800 Gossypium hirsutum HOM05D004970 ORTHO05D005665 1.2e-17 94.4 229 34.5
Ca_13824_v3 Cicer arietinum L. HOM05D004970 ORTHO05D005665 1.6e-17 94.0 223 36.3
Gorai.004G255000 Gossypium raimondii HOM05D004970 ORTHO05D005665 2.1e-17 93.6 229 34.5
TPR.G20254 Trifolium pratense HOM05D004970 ORTHO05D005665 3.5e-17 92.8 219 34.2
Lj3C883T3 Lonicera japonica HOM05D004970 ORTHO05D005665 1.3e-16 90.9 235 35.3
Psat7g161560 Pisum sativum HOM05D004970 ORTHO05D005665 1.3e-16 90.9 215 36.3
Sed0000344 Sechium edule HOM05D004970 ORTHO05D005665 1.3e-16 90.9 223 38.1
Sc13g0011030 Simmondsia chinensis HOM05D004970 ORTHO05D005665 1.3e-16 90.9 224 33.5
HanXRQChr08g0223061 Helianthus annuus HOM05D004970 ORTHO05D005665 5.1e-16 89.0 222 33.3
MSTRG.26919 Avicennia marina HOM05D004970 ORTHO05D005665 1.9e-15 87.0 216 31.5
CARHR056270 Cardamine hirsuta HOM05D004970 ORTHO05D005665 1.9e-15 87.0 235 37.0
FAN03G2928 Fragaria x ananassa HOM05D004970 ORTHO05D005665 4.3e-15 85.9 215 34.9
BcaB05g23594 Brassica carinata HOM05D004970 ORTHO05D005665 5.6e-15 85.5 227 33.9
ECA232G1337 Erigeron canadensis HOM05D004970 ORTHO05D005665 9.6e-15 84.7 217 34.6
Migut.H00003 Erythranthe guttata HOM05D004970 ORTHO05D005665 1.6e-14 84.0 228 30.3
AUR62024839 Chenopodium quinoa HOM05D004970 ORTHO05D005665 2.1e-14 83.6 212 34.4
AUR62032380 Chenopodium quinoa HOM05D004970 ORTHO05D005665 2.8e-14 83.2 219 33.8
SEGI_26324 Sequoiadendron giganteum HOM05D004970 ORTHO05D005665 4.8e-14 82.4 224 33.5
HPP92_022744 Vanilla planifolia HOM05D004970 ORTHO05D005665 6.2e-14 82.0 146 44.5
AL2G19270 Arabidopsis lyrata HOM05D004970 ORTHO05D005665 8.1e-14 81.6 232 34.1
Carub.0002s0979 Capsella rubella HOM05D004970 ORTHO05D005665 6.9e-13 78.6 237 32.9
Eucgr.A02994 Eucalyptus grandis HOM05D004970 ORTHO05D005665 6.9e-13 78.6 186 33.9
Lsat_1_v5_gn_9_50600 Lactuca sativa HOM05D004970 ORTHO05D005665 9.0e-13 78.2 221 33.0
Ah.10g025760 Amaranthus hybridus HOM05D004970 ORTHO05D005665 2.6e-12 76.6 220 34.5
AT1G64860 Arabidopsis thaliana HOM05D004970 ORTHO05D005665 5.8e-12 75.5 224 33.9
C02p37850 Brassica napus HOM05D004970 ORTHO05D005665 5.8e-12 75.5 229 33.2
BolC2t09801H Brassica oleracea HOM05D004970 ORTHO05D005665 5.8e-12 75.5 229 33.2
Cc02_g00040 Coffea canephora HOM05D004970 ORTHO05D005665 5.8e-12 75.5 208 31.2
Zm00001eb415360 Zea mays HOM05D004970 ORTHO05D005665 1.0e-11 74.7 124 37.9
EL10Ac2g02539 Beta vulgaris HOM05D004970 ORTHO05D005665 1.3e-11 74.3 220 33.2
BcaC03g16031 Brassica carinata HOM05D004970 ORTHO05D005665 2.2e-11 73.6 232 32.8
A02p24000 Brassica napus HOM05D004970 ORTHO05D005665 6.5e-11 72.0 236 31.8
Os08g0163400 Oryza sativa ssp. japonica HOM05D004970 ORTHO05D005665 6.5e-11 72.0 123 38.2
Zm00001eb172090 Zea mays HOM05D004970 ORTHO05D005665 6.5e-11 72.0 168 30.4
GSVIVG01024261001 Vitis vinifera HOM05D004970 ORTHO05D005665 1.1e-10 71.2 228 33.8
SGA_v2.0_scaffold18G08209 Striga asiatica HOM05D004970 ORTHO05D005665 1.9e-10 70.5 130 39.2
BraA02t07395Z Brassica rapa HOM05D004970 ORTHO05D005665 4.2e-10 69.3 236 31.4
Cpa.g.sc3807.1 Carica papaya HOM05D004970 ORTHO05D005665 1.0e-08 64.7 84 45.2
CANSAT21G0704 Cannabis sativa HOM05D004970 ORTHO05D005665 5.1e-08 62.4 222 29.3
unitig_0.g2402 Utricularia gibba HOM05D004970 ORTHO05D005665 6.7e-08 62.0 200 26.5


User provided reference genes

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